RNA–Protein interactions for RNA: ENST00000494401.5

SNX5-216, Transcript of sorting nexin 5, humanhuman

TSL 5

Gene SNX5, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-216ENST00000494401 HOXA2O43364 376 aa8.82□□□□□ -1
SNX5-216ENST00000494401 THAP11Q96EK4 314 aa8.82□□□□□ -1
SNX5-216ENST00000494401 KDM4CQ9H3R0 1056 aa8.82□□□□□ -1
SNX5-216ENST00000494401 TLL1O43897 1013 aa8.81□□□□□ -1
SNX5-216ENST00000494401 USP46P62068 366 aa8.81□□□□□ -1
SNX5-216ENST00000494401 A0A0G2JS52 829 aa8.8□□□□□ -1
SNX5-216ENST00000494401 NR1I2O75469 434 aa8.8□□□□□ -1
SNX5-216ENST00000494401 PDS5BQ9NTI5 1447 aa8.8□□□□□ -1
SNX5-216ENST00000494401 SUPT5HO00267 1087 aaKnown RBP8.79□□□□□ -1
SNX5-216ENST00000494401 BRPF1P55201 1214 aaPredicted RBP8.79□□□□□ -1
SNX5-216ENST00000494401 GUCA2AQ02747 115 aa8.79□□□□□ -1
SNX5-216ENST00000494401 MOXD2PA6NHM9 499 aa8.78□□□□□ -1
SNX5-216ENST00000494401 BRICD5Q6PL45 260 aa8.78□□□□□ -1
SNX5-216ENST00000494401 NUTM1Q86Y26 1132 aa8.78□□□□□ -1
SNX5-216ENST00000494401 TBC1D2Q9BYX2 928 aa8.78□□□□□ -1
SNX5-216ENST00000494401 FAM117AQ9C073 453 aa8.78□□□□□ -1
SNX5-216ENST00000494401 PCDHGC3Q9UN70 934 aa8.78□□□□□ -1
SNX5-216ENST00000494401 SALL2Q9Y467 1007 aaPredicted RBP8.78□□□□□ -1
SNX5-216ENST00000494401 NDUFV2P19404 249 aa8.77□□□□□ -1.01
SNX5-216ENST00000494401 GRIPAP1Q4V328 841 aa8.77□□□□□ -1.01
SNX5-216ENST00000494401 RNF19BQ6ZMZ0 732 aa8.77□□□□□ -1.01
SNX5-216ENST00000494401 PLEKHG3A1L390 1219 aa8.76□□□□□ -1.01
SNX5-216ENST00000494401 PPP1R18Q6NYC8 613 aa8.76□□□□□ -1.01
SNX5-216ENST00000494401 FAM160A2Q8N612 972 aaPredicted RBP8.76□□□□□ -1.01
SNX5-216ENST00000494401 ADH1BP00325 375 aa8.75□□□□□ -1.01
SNX5-216ENST00000494401 SPSB2Q99619 263 aa8.75□□□□□ -1.01
SNX5-216ENST00000494401 NEUROD2Q15784 382 aa8.74□□□□□ -1.01
SNX5-216ENST00000494401 MYSM1Q5VVJ2 828 aa8.74□□□□□ -1.01
SNX5-216ENST00000494401 SMARCA4P51532 1647 aa8.73□□□□□ -1.01
SNX5-216ENST00000494401 FMNL1O95466 1100 aaPredicted RBP8.73□□□□□ -1.01
SNX5-216ENST00000494401 GJA5P36382 358 aa8.73□□□□□ -1.01
SNX5-216ENST00000494401 RSBN1LQ6PCB5 846 aaPredicted RBP8.73□□□□□ -1.01
SNX5-216ENST00000494401 SYMPKQ92797 1274 aaKnown RBP8.73□□□□□ -1.01
SNX5-216ENST00000494401 SPTLC1O15269 473 aa8.72□□□□□ -1.01
SNX5-216ENST00000494401 S1PR4O95977 384 aa8.72□□□□□ -1.01
SNX5-216ENST00000494401 FDX1P10109 184 aa8.72□□□□□ -1.01
SNX5-216ENST00000494401 DIXDC1Q155Q3 683 aa8.72□□□□□ -1.01
SNX5-216ENST00000494401 PCDHB15Q9Y5E8 787 aa8.72□□□□□ -1.01
SNX5-216ENST00000494401 BAZ1BQ9UIG0 1483 aaKnown RBP8.71□□□□□ -1.01
SNX5-216ENST00000494401 Q3C1V9 767 aa8.71□□□□□ -1.02
SNX5-216ENST00000494401 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.71□□□□□ -1.02
SNX5-216ENST00000494401 LIMD1Q9UGP4 676 aa8.71□□□□□ -1.02
SNX5-216ENST00000494401 RNF223E7ERA6 249 aa8.7□□□□□ -1.02
SNX5-216ENST00000494401 MSS51Q4VC12 460 aa8.7□□□□□ -1.02
SNX5-216ENST00000494401 RIC3Q7Z5B4 369 aa8.7□□□□□ -1.02
SNX5-216ENST00000494401 DDRGK1Q96HY6 314 aa8.7□□□□□ -1.02
SNX5-216ENST00000494401 SLC6A16Q9GZN6 736 aa8.7□□□□□ -1.02
SNX5-216ENST00000494401 PRDM9Q9NQV7 894 aa8.7□□□□□ -1.02
SNX5-216ENST00000494401 EMID1Q96A84 441 aaPredicted RBP8.69□□□□□ -1.02
SNX5-216ENST00000494401 USB1Q9BQ65 265 aaKnown RBP8.69□□□□□ -1.02
SNX5-216ENST00000494401 PPEF1O14829 653 aaPredicted RBP8.68□□□□□ -1.02
SNX5-216ENST00000494401 TUSC1Q2TAM9 212 aa8.68□□□□□ -1.02
SNX5-216ENST00000494401 ZNF608Q9ULD9 1512 aaPredicted RBP8.68□□□□□ -1.02
SNX5-216ENST00000494401 MMP16P51512 607 aa8.67□□□□□ -1.02
SNX5-216ENST00000494401 SH3D19Q5HYK7 790 aa8.66□□□□□ -1.02
SNX5-216ENST00000494401 PLA2G2CQ5R387 149 aa8.66□□□□□ -1.02
SNX5-216ENST00000494401 FBXO31Q5XUX0 539 aaPredicted RBP8.66□□□□□ -1.02
SNX5-216ENST00000494401 RETREG3Q86VR2 466 aa8.66□□□□□ -1.02
SNX5-216ENST00000494401 ANKLE1Q8NAG6 615 aa8.66□□□□□ -1.02
SNX5-216ENST00000494401 RSPH6AQ9H0K4 717 aa8.66□□□□□ -1.02
SNX5-216ENST00000494401 CHD1O14646 1710 aa8.66□□□□□ -1.02
SNX5-216ENST00000494401 URB2Q14146 1524 aaKnown RBP8.65□□□□□ -1.02
SNX5-216ENST00000494401 CADPSQ9ULU8 1353 aa8.65□□□□□ -1.02
SNX5-216ENST00000494401 RGS20O76081 388 aa8.65□□□□□ -1.02
SNX5-216ENST00000494401 DXOO77932 396 aaKnown RBP8.65□□□□□ -1.02
SNX5-216ENST00000494401 HRCP23327 699 aa8.65□□□□□ -1.02
SNX5-216ENST00000494401 CLK2P49760 499 aaKnown RBP8.65□□□□□ -1.02
SNX5-216ENST00000494401 SKIV2LQ15477 1246 aaKnown RBP8.65□□□□□ -1.02
SNX5-216ENST00000494401 QPCTQ16769 361 aa8.65□□□□□ -1.02
SNX5-216ENST00000494401 IL27Q8NEV9 243 aa8.65□□□□□ -1.02
SNX5-216ENST00000494401 POLR3EQ9NVU0 708 aa8.65□□□□□ -1.02
SNX5-216ENST00000494401 CEP164Q9UPV0 1460 aa8.64□□□□□ -1.03
SNX5-216ENST00000494401 C6orf229H3BNL8 230 aa8.64□□□□□ -1.03
SNX5-216ENST00000494401 LILRB3O75022 631 aa8.64□□□□□ -1.03
SNX5-216ENST00000494401 GGCXP38435 758 aa8.64□□□□□ -1.03
SNX5-216ENST00000494401 MTMR2Q13614 643 aa8.64□□□□□ -1.03
SNX5-216ENST00000494401 PRPF38BQ5VTL8 546 aaKnown RBP8.64□□□□□ -1.03
SNX5-216ENST00000494401 PROCA1Q8NCQ7 364 aaPredicted RBP8.64□□□□□ -1.03
SNX5-216ENST00000494401 CABLES1Q8TDN4 633 aa8.64□□□□□ -1.03
SNX5-216ENST00000494401 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.64□□□□□ -1.03
SNX5-216ENST00000494401 PEG3Q9GZU2 1588 aa8.62□□□□□ -1.03
SNX5-216ENST00000494401 SPDYE5A6NIY4 337 aa8.62□□□□□ -1.03
SNX5-216ENST00000494401 CFAP99D6REC4 459 aa8.62□□□□□ -1.03
SNX5-216ENST00000494401 GOPCQ9HD26 462 aa8.62□□□□□ -1.03
SNX5-216ENST00000494401 RSF1Q96T23 1441 aaPredicted RBP8.62□□□□□ -1.03
SNX5-216ENST00000494401 JUNDP17535 347 aa8.61□□□□□ -1.03
SNX5-216ENST00000494401 CSPP1Q1MSJ5 1256 aa8.61□□□□□ -1.03
SNX5-216ENST00000494401 RTL5Q5HYW3 569 aaPredicted RBP8.61□□□□□ -1.03
SNX5-216ENST00000494401 PRR7Q8TB68 274 aa8.61□□□□□ -1.03
SNX5-216ENST00000494401 ZBTB3Q9H5J0 574 aa8.61□□□□□ -1.03
SNX5-216ENST00000494401 FCF1Q9Y324 198 aaKnown RBP8.61□□□□□ -1.03
SNX5-216ENST00000494401 LIAT1Q6ZQX7 453 aa8.6□□□□□ -1.03
SNX5-216ENST00000494401 FANCD2Q9BXW9 1451 aa8.59□□□□□ -1.03
SNX5-216ENST00000494401 DESI1Q6ICB0 168 aa8.59□□□□□ -1.03
SNX5-216ENST00000494401 PRKD2Q9BZL6 878 aa8.59□□□□□ -1.03
SNX5-216ENST00000494401 V9GY48 417 aaPredicted RBP8.59□□□□□ -1.03
SNX5-216ENST00000494401 PPP2R2DQ66LE6 453 aa8.58□□□□□ -1.04
SNX5-216ENST00000494401 EIF4G3O43432 1585 aaKnown RBP8.57□□□□□ -1.04
SNX5-216ENST00000494401 LMTK3Q96Q04 1460 aa8.57□□□□□ -1.04
SNX5-216ENST00000494401 HECW2Q9P2P5 1572 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms