RNA–Protein interactions for RNA: ENST00000494174.5

NECAB3-215, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 859 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-215	ENST00000494174	PLEKHH1	Q9ULM0	1364 aa		28.55	■■■□□ 2.16
NECAB3-215	ENST00000494174	WAPL	Q7Z5K2	1190 aa		28.54	■■■□□ 2.16
NECAB3-215	ENST00000494174	KDM2A	Q9Y2K7	1162 aa		28.54	■■■□□ 2.16
NECAB3-215	ENST00000494174	JCAD	Q9P266	1359 aa		28.52	■■■□□ 2.16
NECAB3-215	ENST00000494174	ADGRB2	O60241	1585 aa		28.48	■■■□□ 2.15
NECAB3-215	ENST00000494174	FMN2	Q9NZ56	1722 aa		28.48	■■■□□ 2.15
NECAB3-215	ENST00000494174	SHPRH	Q149N8	1683 aa		28.48	■■■□□ 2.15
NECAB3-215	ENST00000494174	PRAM1	Q96QH2	718 aa		28.44	■■■□□ 2.14
NECAB3-215	ENST00000494174	SIN3A	Q96ST3	1273 aa		28.42	■■■□□ 2.14
NECAB3-215	ENST00000494174	ARHGEF28	Q8N1W1	1705 aa	Known RBP	28.41	■■■□□ 2.14
NECAB3-215	ENST00000494174	L3MBTL2	Q969R5	705 aa		28.41	■■■□□ 2.14
NECAB3-215	ENST00000494174	ORAI2	Q96SN7	254 aa		28.41	■■■□□ 2.14
NECAB3-215	ENST00000494174	SPATA31A6	Q5VVP1	1343 aa		28.41	■■■□□ 2.14
NECAB3-215	ENST00000494174	SOS2	Q07890	1332 aa	Predicted RBP	28.4	■■■□□ 2.14
NECAB3-215	ENST00000494174	TRAK1	Q9UPV9	953 aa		28.38	■■■□□ 2.13
NECAB3-215	ENST00000494174	LRRC59	Q96AG4	307 aa	Known RBP	28.37	■■■□□ 2.13
NECAB3-215	ENST00000494174	ANKAR	Q7Z5J8	1434 aa		28.36	■■■□□ 2.13
NECAB3-215	ENST00000494174	POGK	Q9P215	609 aa		28.36	■■■□□ 2.13
NECAB3-215	ENST00000494174	KIF1A	Q12756	1690 aa		28.35	■■■□□ 2.13
NECAB3-215	ENST00000494174	ILDR2	Q71H61	639 aa		28.33	■■■□□ 2.13
NECAB3-215	ENST00000494174	NPHP3	Q7Z494	1330 aa		28.33	■■■□□ 2.13
NECAB3-215	ENST00000494174	PXDN	Q92626	1479 aa		28.33	■■■□□ 2.13
NECAB3-215	ENST00000494174	ESCO1	Q5FWF5	840 aa		28.32	■■■□□ 2.12
NECAB3-215	ENST00000494174	DDX17	Q92841	729 aa	Known RBP	28.32	■■■□□ 2.12
NECAB3-215	ENST00000494174	PNPLA6	Q8IY17	1366 aa		28.32	■■■□□ 2.12
NECAB3-215	ENST00000494174	LRP6	O75581	1613 aa		28.32	■■■□□ 2.12
NECAB3-215	ENST00000494174	TRPM1	Q7Z4N2	1603 aa		28.31	■■■□□ 2.12
NECAB3-215	ENST00000494174	USP32	Q8NFA0	1604 aa		28.31	■■■□□ 2.12
NECAB3-215	ENST00000494174	EIF3A	Q14152	1382 aa	Known RBP	28.3	■■■□□ 2.12
NECAB3-215	ENST00000494174	NBPF1	Q3BBV0	1214 aa		28.3	■■■□□ 2.12
NECAB3-215	ENST00000494174	NEUROD1	Q13562	356 aa		28.29	■■■□□ 2.12
NECAB3-215	ENST00000494174	SAFB2	Q14151	953 aa	Known RBP eCLIP	28.28	■■■□□ 2.12
NECAB3-215	ENST00000494174	PHF23	Q9BUL5	403 aa	Predicted RBP	28.28	■■■□□ 2.12
NECAB3-215	ENST00000494174	TULP4	Q9NRJ4	1543 aa		28.28	■■■□□ 2.12
NECAB3-215	ENST00000494174	RGS17	Q9UGC6	210 aa	Predicted RBP	28.27	■■■□□ 2.12
NECAB3-215	ENST00000494174	COL22A1	Q8NFW1	1626 aa	Predicted RBP	28.27	■■■□□ 2.12
NECAB3-215	ENST00000494174	RGPD8	O14715	1765 aa	Predicted RBP	28.27	■■■□□ 2.12
NECAB3-215	ENST00000494174	WASL	O00401	505 aa	Predicted RBP	28.24	■■■□□ 2.11
NECAB3-215	ENST00000494174	GPRASP1	Q5JY77	1395 aa		28.24	■■■□□ 2.11
NECAB3-215	ENST00000494174	MINK1	Q8N4C8	1332 aa	Predicted RBP	28.23	■■■□□ 2.11
NECAB3-215	ENST00000494174	NUTM2F	A1L443	756 aa		28.23	■■■□□ 2.11
NECAB3-215	ENST00000494174	FOXO3	O43524	673 aa		28.22	■■■□□ 2.11
NECAB3-215	ENST00000494174	PHF8	Q9UPP1	1060 aa		28.22	■■■□□ 2.11
NECAB3-215	ENST00000494174	PRR36	Q9H6K5	1346 aa		28.19	■■■□□ 2.1
NECAB3-215	ENST00000494174	HIRIP3	Q9BW71	556 aa	Predicted RBP	28.19	■■■□□ 2.1
NECAB3-215	ENST00000494174	TONSL	Q96HA7	1378 aa		28.18	■■■□□ 2.1
NECAB3-215	ENST00000494174	ATP7B	P35670	1465 aa		28.18	■■■□□ 2.1
NECAB3-215	ENST00000494174	NBPF8	Q3BBV2	869 aa		28.16	■■■□□ 2.1
NECAB3-215	ENST00000494174	CLSPN	Q9HAW4	1339 aa		28.16	■■■□□ 2.1
NECAB3-215	ENST00000494174	CENPJ	Q9HC77	1338 aa	Predicted RBP	28.16	■■■□□ 2.1
NECAB3-215	ENST00000494174	SBNO1	A3KN83	1393 aa		28.15	■■■□□ 2.1
NECAB3-215	ENST00000494174	ROCK2	O75116	1388 aa	Known RBP	28.15	■■■□□ 2.1
NECAB3-215	ENST00000494174	SPATA31A3	Q5VYP0	1347 aa		28.15	■■■□□ 2.1
NECAB3-215	ENST00000494174	ITSN1	Q15811	1721 aa		28.15	■■■□□ 2.1
NECAB3-215	ENST00000494174	RALGAPB	Q86X10	1494 aa		28.14	■■■□□ 2.09
NECAB3-215	ENST00000494174	TOPAZ1	Q8N9V7	1692 aa		28.13	■■■□□ 2.09
NECAB3-215	ENST00000494174	KRT28	Q7Z3Y7	464 aa		28.12	■■■□□ 2.09
NECAB3-215	ENST00000494174	QRICH2	Q9H0J4	1663 aa		28.12	■■■□□ 2.09
NECAB3-215	ENST00000494174	TNS3	Q68CZ2	1445 aa		28.11	■■■□□ 2.09
NECAB3-215	ENST00000494174	SOCS7	O14512	581 aa		28.1	■■■□□ 2.09
NECAB3-215	ENST00000494174	PSME1	Q06323	249 aa		28.1	■■■□□ 2.09
NECAB3-215	ENST00000494174	TRPM3	Q9HCF6	1732 aa	Predicted RBP	28.09	■■■□□ 2.09
NECAB3-215	ENST00000494174	XPC	Q01831	940 aa	Predicted RBP	28.09	■■■□□ 2.09
NECAB3-215	ENST00000494174	MEX3C	Q5U5Q3	659 aa	Known RBP	28.09	■■■□□ 2.09
NECAB3-215	ENST00000494174	POTEA	Q6S8J7	498 aa		28.09	■■■□□ 2.09
NECAB3-215	ENST00000494174	CDK19	Q9BWU1	502 aa		28.09	■■■□□ 2.09
NECAB3-215	ENST00000494174	NUTM2B	A6NNL0	878 aa	Predicted RBP	28.08	■■■□□ 2.09
NECAB3-215	ENST00000494174	NUTM2E	B1AL46	878 aa	Predicted RBP	28.08	■■■□□ 2.09
NECAB3-215	ENST00000494174	NUTM2A	Q8IVF1	878 aa	Predicted RBP	28.08	■■■□□ 2.09
NECAB3-215	ENST00000494174	NUDT16	Q96DE0	195 aa	Known RBP	28.08	■■■□□ 2.09
NECAB3-215	ENST00000494174	ZNF772	Q68DY9	489 aa	Predicted RBP	28.07	■■■□□ 2.08
NECAB3-215	ENST00000494174	PCGF6	Q9BYE7	350 aa		28.06	■■■□□ 2.08
NECAB3-215	ENST00000494174	SBNO2	Q9Y2G9	1366 aa		28.06	■■■□□ 2.08
NECAB3-215	ENST00000494174	POLR3A	O14802	1390 aa	Predicted RBP	28.05	■■■□□ 2.08
NECAB3-215	ENST00000494174	PMFBP1	Q8TBY8	1022 aa		28.05	■■■□□ 2.08
NECAB3-215	ENST00000494174	ARHGEF10	O15013	1369 aa		28.04	■■■□□ 2.08
NECAB3-215	ENST00000494174	CCDC61	Q9Y6R9	512 aa		28.04	■■■□□ 2.08
NECAB3-215	ENST00000494174	ALS2	Q96Q42	1657 aa		28.03	■■■□□ 2.08
NECAB3-215	ENST00000494174	PLEKHG3	A1L390	1219 aa		28.03	■■■□□ 2.08
NECAB3-215	ENST00000494174	TIMELESS	Q9UNS1	1208 aa		28.03	■■■□□ 2.08
NECAB3-215	ENST00000494174	MARF1	Q9Y4F3	1742 aa	Known RBP	28.03	■■■□□ 2.08
NECAB3-215	ENST00000494174	AFF2	P51816	1311 aa		28	■■■□□ 2.07
NECAB3-215	ENST00000494174	FNBP4	Q8N3X1	1017 aa	Predicted RBP	27.99	■■■□□ 2.07
NECAB3-215	ENST00000494174	CARD11	Q9BXL7	1154 aa		27.98	■■■□□ 2.07
NECAB3-215	ENST00000494174	ABCA3	Q99758	1704 aa		27.98	■■■□□ 2.07
NECAB3-215	ENST00000494174	EVC2	Q86UK5	1308 aa		27.96	■■■□□ 2.07
NECAB3-215	ENST00000494174	NGDN	Q8NEJ9	315 aa	Known RBP	27.96	■■■□□ 2.07
NECAB3-215	ENST00000494174	C8orf37	Q96NL8	207 aa		27.96	■■■□□ 2.07
NECAB3-215	ENST00000494174	ADAMTS2	O95450	1211 aa		27.95	■■■□□ 2.06
NECAB3-215	ENST00000494174	CDK12	Q9NYV4	1490 aa	Predicted RBP	27.95	■■■□□ 2.06
NECAB3-215	ENST00000494174	BRD4	O60885	1362 aa	Predicted RBP	27.94	■■■□□ 2.06
NECAB3-215	ENST00000494174	PPIP5K1	Q6PFW1	1433 aa		27.93	■■■□□ 2.06
NECAB3-215	ENST00000494174	SRPK2	P78362	688 aa	Known RBP	27.93	■■■□□ 2.06
NECAB3-215	ENST00000494174	ACE	P12821	1306 aa		27.92	■■■□□ 2.06
NECAB3-215	ENST00000494174	CRYBG1	Q9Y4K1	1723 aa		27.92	■■■□□ 2.06
NECAB3-215	ENST00000494174	NGLY1	Q96IV0	654 aa		27.92	■■■□□ 2.06
NECAB3-215	ENST00000494174	CABP2	Q9NPB3	220 aa		27.92	■■■□□ 2.06
NECAB3-215	ENST00000494174	SLIT2	O94813	1529 aa		27.9	■■■□□ 2.06
NECAB3-215	ENST00000494174	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	27.89	■■■□□ 2.06
NECAB3-215	ENST00000494174	BCL9L	Q86UU0	1499 aa		27.89	■■■□□ 2.05

Retrieved 100 of 20,778 RNA–protein pairs in 217.2 ms