RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 STK26Q9P289 416 aa19.82■□□□□ 0.76
CTDSP1-212ENST00000494067 YTHDC2Q9H6S0 1430 aaKnown RBP19.81■□□□□ 0.76
CTDSP1-212ENST00000494067 FMN2Q9NZ56 1722 aa19.8■□□□□ 0.76
CTDSP1-212ENST00000494067 PNPLA6Q8IY17 1366 aa19.8■□□□□ 0.76
CTDSP1-212ENST00000494067 ABCC11Q96J66 1382 aa19.8■□□□□ 0.76
CTDSP1-212ENST00000494067 LRRC59Q96AG4 307 aaKnown RBP19.79■□□□□ 0.76
CTDSP1-212ENST00000494067 CFAP70Q5T0N1 1121 aa19.78■□□□□ 0.76
CTDSP1-212ENST00000494067 C14orf93Q9H972 538 aaKnown RBP19.78■□□□□ 0.76
CTDSP1-212ENST00000494067 ADGRB1O14514 1584 aa19.78■□□□□ 0.76
CTDSP1-212ENST00000494067 RGPD8O14715 1765 aaPredicted RBP19.77■□□□□ 0.76
CTDSP1-212ENST00000494067 NUTM2BA6NNL0 878 aaPredicted RBP19.76■□□□□ 0.75
CTDSP1-212ENST00000494067 NUTM2EB1AL46 878 aaPredicted RBP19.76■□□□□ 0.75
CTDSP1-212ENST00000494067 ZNF772Q68DY9 489 aaPredicted RBP19.76■□□□□ 0.75
CTDSP1-212ENST00000494067 NUTM2AQ8IVF1 878 aaPredicted RBP19.76■□□□□ 0.75
CTDSP1-212ENST00000494067 SOS2Q07890 1332 aaPredicted RBP19.76■□□□□ 0.75
CTDSP1-212ENST00000494067 PXDNQ92626 1479 aa19.75■□□□□ 0.75
CTDSP1-212ENST00000494067 COL22A1Q8NFW1 1626 aaPredicted RBP19.74■□□□□ 0.75
CTDSP1-212ENST00000494067 NUTM2FA1L443 756 aa19.73■□□□□ 0.75
CTDSP1-212ENST00000494067 DHX57Q6P158 1386 aaKnown RBP19.72■□□□□ 0.75
CTDSP1-212ENST00000494067 HRCP23327 699 aa19.72■□□□□ 0.75
CTDSP1-212ENST00000494067 USP32Q8NFA0 1604 aa19.71■□□□□ 0.75
CTDSP1-212ENST00000494067 DLC1Q96QB1 1528 aa19.7■□□□□ 0.74
CTDSP1-212ENST00000494067 ESCO1Q5FWF5 840 aa19.69■□□□□ 0.74
CTDSP1-212ENST00000494067 XPCQ01831 940 aaPredicted RBP19.68■□□□□ 0.74
CTDSP1-212ENST00000494067 KIF1AQ12756 1690 aa19.68■□□□□ 0.74
CTDSP1-212ENST00000494067 ADGRB2O60241 1585 aa19.67■□□□□ 0.74
CTDSP1-212ENST00000494067 SIRT1Q96EB6 747 aa19.67■□□□□ 0.74
CTDSP1-212ENST00000494067 KDM2AQ9Y2K7 1162 aa19.67■□□□□ 0.74
CTDSP1-212ENST00000494067 AFF2P51816 1311 aa19.67■□□□□ 0.74
CTDSP1-212ENST00000494067 FOXO3O43524 673 aa19.66■□□□□ 0.74
CTDSP1-212ENST00000494067 SAFB2Q14151 953 aaKnown RBP eCLIP19.66■□□□□ 0.74
CTDSP1-212ENST00000494067 DCAF11Q8TEB1 546 aa19.66■□□□□ 0.74
CTDSP1-212ENST00000494067 PRAM1Q96QH2 718 aa19.66■□□□□ 0.74
CTDSP1-212ENST00000494067 ARHGEF28Q8N1W1 1705 aaKnown RBP19.65■□□□□ 0.74
CTDSP1-212ENST00000494067 MARF1Q9Y4F3 1742 aaKnown RBP19.65■□□□□ 0.74
CTDSP1-212ENST00000494067 RXRBP28702 533 aa19.64■□□□□ 0.73
CTDSP1-212ENST00000494067 C8orf37Q96NL8 207 aa19.64■□□□□ 0.73
CTDSP1-212ENST00000494067 NPHP3Q7Z494 1330 aa19.63■□□□□ 0.73
CTDSP1-212ENST00000494067 ADAMTS2O95450 1211 aa19.63■□□□□ 0.73
CTDSP1-212ENST00000494067 TRAK1Q9UPV9 953 aa19.61■□□□□ 0.73
CTDSP1-212ENST00000494067 NGLY1Q96IV0 654 aa19.6■□□□□ 0.73
CTDSP1-212ENST00000494067 ABCA3Q99758 1704 aa19.59■□□□□ 0.73
CTDSP1-212ENST00000494067 HIRIP3Q9BW71 556 aaPredicted RBP19.58■□□□□ 0.72
CTDSP1-212ENST00000494067 RGS12O14924 1447 aa19.58■□□□□ 0.72
CTDSP1-212ENST00000494067 TRPM3Q9HCF6 1732 aaPredicted RBP19.57■□□□□ 0.72
CTDSP1-212ENST00000494067 CDK12Q9NYV4 1490 aaPredicted RBP19.57■□□□□ 0.72
CTDSP1-212ENST00000494067 STAC3Q96MF2 364 aa19.57■□□□□ 0.72
CTDSP1-212ENST00000494067 KIAA1210Q9ULL0 1709 aa19.56■□□□□ 0.72
CTDSP1-212ENST00000494067 PRR36Q9H6K5 1346 aa19.56■□□□□ 0.72
CTDSP1-212ENST00000494067 QTRT2Q9H974 415 aaKnown RBP19.56■□□□□ 0.72
CTDSP1-212ENST00000494067 POGKQ9P215 609 aa19.56■□□□□ 0.72
CTDSP1-212ENST00000494067 SPATA31A3Q5VYP0 1347 aa19.55■□□□□ 0.72
CTDSP1-212ENST00000494067 MINK1Q8N4C8 1332 aaPredicted RBP19.55■□□□□ 0.72
CTDSP1-212ENST00000494067 PHF8Q9UPP1 1060 aa19.55■□□□□ 0.72
CTDSP1-212ENST00000494067 ANKARQ7Z5J8 1434 aa19.54■□□□□ 0.72
CTDSP1-212ENST00000494067 TULP4Q9NRJ4 1543 aa19.54■□□□□ 0.72
CTDSP1-212ENST00000494067 RBM6P78332 1123 aaKnown RBP19.53■□□□□ 0.72
CTDSP1-212ENST00000494067 KRT28Q7Z3Y7 464 aa19.53■□□□□ 0.72
CTDSP1-212ENST00000494067 BCL9LQ86UU0 1499 aa19.53■□□□□ 0.72
CTDSP1-212ENST00000494067 ALS2Q96Q42 1657 aa19.52■□□□□ 0.72
CTDSP1-212ENST00000494067 TNS3Q68CZ2 1445 aa19.52■□□□□ 0.72
CTDSP1-212ENST00000494067 FNBP4Q8N3X1 1017 aaPredicted RBP19.52■□□□□ 0.72
CTDSP1-212ENST00000494067 ATRNO75882 1429 aa19.51■□□□□ 0.71
CTDSP1-212ENST00000494067 PSME1Q06323 249 aa19.51■□□□□ 0.71
CTDSP1-212ENST00000494067 PMFBP1Q8TBY8 1022 aa19.51■□□□□ 0.71
CTDSP1-212ENST00000494067 USP21Q9UK80 565 aa19.51■□□□□ 0.71
CTDSP1-212ENST00000494067 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.51■□□□□ 0.71
CTDSP1-212ENST00000494067 CRYBG1Q9Y4K1 1723 aa19.51■□□□□ 0.71
CTDSP1-212ENST00000494067 NBPF1Q3BBV0 1214 aa19.5■□□□□ 0.71
CTDSP1-212ENST00000494067 TOPAZ1Q8N9V7 1692 aa19.49■□□□□ 0.71
CTDSP1-212ENST00000494067 ATP7BP35670 1465 aa19.49■□□□□ 0.71
CTDSP1-212ENST00000494067 UPF1Q92900 1129 aaKnown RBP eCLIP19.49■□□□□ 0.714e-7■■■□□ 16.6
CTDSP1-212ENST00000494067 PLCH1Q4KWH8 1693 aa19.49■□□□□ 0.71
CTDSP1-212ENST00000494067 CABLES1Q8TDN4 633 aa19.48■□□□□ 0.71
CTDSP1-212ENST00000494067 TRPC5Q9UL62 973 aaPredicted RBP19.48■□□□□ 0.71
CTDSP1-212ENST00000494067 ITSN1Q15811 1721 aa19.48■□□□□ 0.71
CTDSP1-212ENST00000494067 SBNO1A3KN83 1393 aa19.47■□□□□ 0.71
CTDSP1-212ENST00000494067 SLIT2O94813 1529 aa19.47■□□□□ 0.71
CTDSP1-212ENST00000494067 WASLO00401 505 aaPredicted RBP19.47■□□□□ 0.71
CTDSP1-212ENST00000494067 HAP1P54257 671 aaPredicted RBP19.47■□□□□ 0.71
CTDSP1-212ENST00000494067 GLI3P10071 1580 aa19.46■□□□□ 0.71
CTDSP1-212ENST00000494067 SIN3AQ96ST3 1273 aa19.46■□□□□ 0.71
CTDSP1-212ENST00000494067 TRPM1Q7Z4N2 1603 aa19.45■□□□□ 0.7
CTDSP1-212ENST00000494067 EIF3AQ14152 1382 aaKnown RBP19.44■□□□□ 0.7
CTDSP1-212ENST00000494067 PLEKHG5O94827 1062 aa19.44■□□□□ 0.7
CTDSP1-212ENST00000494067 L3MBTL2Q969R5 705 aa19.43■□□□□ 0.7
CTDSP1-212ENST00000494067 QRICH2Q9H0J4 1663 aa19.43■□□□□ 0.7
CTDSP1-212ENST00000494067 NRAPQ86VF7 1730 aa19.42■□□□□ 0.7
CTDSP1-212ENST00000494067 LMOD2Q6P5Q4 547 aa19.42■□□□□ 0.7
CTDSP1-212ENST00000494067 NWD2Q9ULI1 1742 aa19.41■□□□□ 0.7
CTDSP1-212ENST00000494067 NUDT16Q96DE0 195 aaKnown RBP19.39■□□□□ 0.69
CTDSP1-212ENST00000494067 ARHGEF10O15013 1369 aa19.39■□□□□ 0.69
CTDSP1-212ENST00000494067 RALGAPBQ86X10 1494 aa19.39■□□□□ 0.69
CTDSP1-212ENST00000494067 PHRF1Q9P1Y6 1649 aaKnown RBP19.39■□□□□ 0.69
CTDSP1-212ENST00000494067 BRWD3Q6RI45 1802 aa19.39■□□□□ 0.69
CTDSP1-212ENST00000494067 CDK19Q9BWU1 502 aa19.38■□□□□ 0.69
CTDSP1-212ENST00000494067 GPRASP1Q5JY77 1395 aa19.37■□□□□ 0.69
CTDSP1-212ENST00000494067 UNC5CLQ8IV45 518 aa19.36■□□□□ 0.69
CTDSP1-212ENST00000494067 GJD4Q96KN9 370 aaPredicted RBP19.36■□□□□ 0.69
CTDSP1-212ENST00000494067 EP400Q96L91 3159 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms