RNA–Protein interactions for RNA: ENST00000494051.1

SSB-212, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 392 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-212ENST00000494051 THAP11Q96EK4 314 aa12.16□□□□□ -0.46
SSB-212ENST00000494051 LIMD1Q9UGP4 676 aa12.16□□□□□ -0.46
SSB-212ENST00000494051 SALL2Q9Y467 1007 aaPredicted RBP12.16□□□□□ -0.46
SSB-212ENST00000494051 PCDHB15Q9Y5E8 787 aa12.16□□□□□ -0.46
SSB-212ENST00000494051 C6orf229H3BNL8 230 aa12.15□□□□□ -0.46
SSB-212ENST00000494051 ADH1BP00325 375 aa12.15□□□□□ -0.46
SSB-212ENST00000494051 GJA5P36382 358 aa12.15□□□□□ -0.46
SSB-212ENST00000494051 SH3D19Q5HYK7 790 aa12.15□□□□□ -0.46
SSB-212ENST00000494051 IFFO2Q5TF58 517 aa12.15□□□□□ -0.46
SSB-212ENST00000494051 SYMPKQ92797 1274 aaKnown RBP12.15□□□□□ -0.46
SSB-212ENST00000494051 CLK2P49760 499 aaKnown RBP12.14□□□□□ -0.47
SSB-212ENST00000494051 SKIV2LQ15477 1246 aaKnown RBP12.14□□□□□ -0.47
SSB-212ENST00000494051 USB1Q9BQ65 265 aaKnown RBP12.11□□□□□ -0.47
SSB-212ENST00000494051 MTMR2Q13614 643 aa12.1□□□□□ -0.47
SSB-212ENST00000494051 FAM160A2Q8N612 972 aaPredicted RBP12.1□□□□□ -0.47
SSB-212ENST00000494051 PROCA1Q8NCQ7 364 aaPredicted RBP12.1□□□□□ -0.47
SSB-212ENST00000494051 SLC6A16Q9GZN6 736 aa12.1□□□□□ -0.47
SSB-212ENST00000494051 S1PR4O95977 384 aa12.09□□□□□ -0.47
SSB-212ENST00000494051 CABLES1Q8TDN4 633 aa12.09□□□□□ -0.47
SSB-212ENST00000494051 NUTM2BA6NNL0 878 aaPredicted RBP12.08□□□□□ -0.48
SSB-212ENST00000494051 NUTM2EB1AL46 878 aaPredicted RBP12.08□□□□□ -0.48
SSB-212ENST00000494051 HRCP23327 699 aa12.08□□□□□ -0.48
SSB-212ENST00000494051 QPCTQ16769 361 aa12.08□□□□□ -0.48
SSB-212ENST00000494051 NUTM2DQ5VT03 806 aaPredicted RBP12.08□□□□□ -0.48
SSB-212ENST00000494051 PPP1R18Q6NYC8 613 aa12.08□□□□□ -0.48
SSB-212ENST00000494051 RETREG3Q86VR2 466 aa12.08□□□□□ -0.48
SSB-212ENST00000494051 NUTM2AQ8IVF1 878 aaPredicted RBP12.08□□□□□ -0.48
SSB-212ENST00000494051 ZBTB3Q9H5J0 574 aa12.08□□□□□ -0.48
SSB-212ENST00000494051 A0A0G2JS52 829 aa12.07□□□□□ -0.48
SSB-212ENST00000494051 GGCXP38435 758 aa12.07□□□□□ -0.48
SSB-212ENST00000494051 TUSC1Q2TAM9 212 aa12.07□□□□□ -0.48
SSB-212ENST00000494051 PCMTD1Q96MG8 357 aaPredicted RBP12.07□□□□□ -0.48
SSB-212ENST00000494051 GOPCQ9HD26 462 aa12.07□□□□□ -0.48
SSB-212ENST00000494051 PRDM9Q9NQV7 894 aa12.07□□□□□ -0.48
SSB-212ENST00000494051 PRPF38BQ5VTL8 546 aaKnown RBP12.06□□□□□ -0.48
SSB-212ENST00000494051 SPDYE5A6NIY4 337 aa12.05□□□□□ -0.48
SSB-212ENST00000494051 MSS51Q4VC12 460 aa12.05□□□□□ -0.48
SSB-212ENST00000494051 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.05□□□□□ -0.48
SSB-212ENST00000494051 LILRB3O75022 631 aa12.04□□□□□ -0.48
SSB-212ENST00000494051 PRR7Q8TB68 274 aa12.04□□□□□ -0.48
SSB-212ENST00000494051 PPEF1O14829 653 aaPredicted RBP12.03□□□□□ -0.48
SSB-212ENST00000494051 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.03□□□□□ -0.48
SSB-212ENST00000494051 RNF223E7ERA6 249 aa12.02□□□□□ -0.49
SSB-212ENST00000494051 RTL5Q5HYW3 569 aaPredicted RBP12.02□□□□□ -0.49
SSB-212ENST00000494051 CFAP99D6REC4 459 aa12.01□□□□□ -0.49
SSB-212ENST00000494051 TSC1Q92574 1164 aa12.01□□□□□ -0.49
SSB-212ENST00000494051 JUNDP17535 347 aa11.99□□□□□ -0.49
SSB-212ENST00000494051 DXOO77932 396 aaKnown RBP11.98□□□□□ -0.49
SSB-212ENST00000494051 MMP16P51512 607 aa11.98□□□□□ -0.49
SSB-212ENST00000494051 FBXO31Q5XUX0 539 aaPredicted RBP11.98□□□□□ -0.49
SSB-212ENST00000494051 FCF1Q9Y324 198 aaKnown RBP11.97□□□□□ -0.49
SSB-212ENST00000494051 ANKLE1Q8NAG6 615 aa11.96□□□□□ -0.49
SSB-212ENST00000494051 CCDC24Q8N4L8 307 aa11.95□□□□□ -0.5
SSB-212ENST00000494051 TMEM132AQ24JP5 1023 aa11.94□□□□□ -0.5
SSB-212ENST00000494051 PPP2R2DQ66LE6 453 aa11.94□□□□□ -0.5
SSB-212ENST00000494051 DESI1Q6ICB0 168 aa11.94□□□□□ -0.5
SSB-212ENST00000494051 Q6ZNB5 142 aa11.94□□□□□ -0.5
SSB-212ENST00000494051 HELBQ8NG08 1087 aaPredicted RBP11.94□□□□□ -0.5
SSB-212ENST00000494051 RFC5P40937 340 aa11.92□□□□□ -0.5
SSB-212ENST00000494051 NUDT12Q9BQG2 462 aa11.92□□□□□ -0.5
SSB-212ENST00000494051 AP1G2O75843 785 aa11.91□□□□□ -0.5
SSB-212ENST00000494051 PTPRNQ16849 979 aa11.9□□□□□ -0.5
SSB-212ENST00000494051 PLA2G2CQ5R387 149 aa11.9□□□□□ -0.5
SSB-212ENST00000494051 LYPD8Q6UX82 237 aa11.9□□□□□ -0.5
SSB-212ENST00000494051 PER1O15534 1290 aaPredicted RBP11.89□□□□□ -0.51
SSB-212ENST00000494051 CCNYL3P0C7X3 344 aa11.89□□□□□ -0.51
SSB-212ENST00000494051 CTDSPL2Q05D32 466 aa11.89□□□□□ -0.51
SSB-212ENST00000494051 PRKD2Q9BZL6 878 aa11.89□□□□□ -0.51
SSB-212ENST00000494051 SLC19A1P41440 591 aa11.87□□□□□ -0.51
SSB-212ENST00000494051 ZBTB24O43167 697 aaPredicted RBP11.86□□□□□ -0.51
SSB-212ENST00000494051 CTHP32929 405 aa11.86□□□□□ -0.51
SSB-212ENST00000494051 TMEM259Q4ZIN3 620 aa11.86□□□□□ -0.51
SSB-212ENST00000494051 LIAT1Q6ZQX7 453 aa11.85□□□□□ -0.51
SSB-212ENST00000494051 EVA1BQ9NVM1 165 aa11.85□□□□□ -0.51
SSB-212ENST00000494051 LRRN4Q8WUT4 740 aa11.84□□□□□ -0.51
SSB-212ENST00000494051 EMID1Q96A84 441 aaPredicted RBP11.84□□□□□ -0.51
SSB-212ENST00000494051 KCNH2Q12809 1159 aa11.83□□□□□ -0.52
SSB-212ENST00000494051 PTCRAQ6ISU1 281 aaPredicted RBP11.83□□□□□ -0.52
SSB-212ENST00000494051 USP17L8P0C7I0 530 aa11.82□□□□□ -0.52
SSB-212ENST00000494051 MAP10Q9P2G4 905 aa11.82□□□□□ -0.52
SSB-212ENST00000494051 V9GY48 417 aaPredicted RBP11.82□□□□□ -0.52
SSB-212ENST00000494051 RPIAP49247 311 aa11.81□□□□□ -0.52
SSB-212ENST00000494051 CD2BP2O95400 341 aaKnown RBP11.8□□□□□ -0.52
SSB-212ENST00000494051 F12P00748 615 aaPredicted RBP11.8□□□□□ -0.52
SSB-212ENST00000494051 UNC93B1Q9H1C4 597 aa11.79□□□□□ -0.52
SSB-212ENST00000494051 TRIM32Q13049 653 aa11.78□□□□□ -0.52
SSB-212ENST00000494051 SPRYD7Q5W111 196 aa11.78□□□□□ -0.52
SSB-212ENST00000494051 BANK1Q8NDB2 785 aa11.76□□□□□ -0.53
SSB-212ENST00000494051 HMX1Q9NP08 348 aaPredicted RBP11.76□□□□□ -0.53
SSB-212ENST00000494051 NR6A1Q15406 480 aa11.75□□□□□ -0.53
SSB-212ENST00000494051 ZNF697Q5TEC3 545 aa11.75□□□□□ -0.53
SSB-212ENST00000494051 ZNF598Q86UK7 904 aaKnown RBP11.74□□□□□ -0.53
SSB-212ENST00000494051 SNRKQ9NRH2 765 aa11.74□□□□□ -0.53
SSB-212ENST00000494051 LINC01559Q495D7 138 aa11.73□□□□□ -0.53
SSB-212ENST00000494051 BAP1Q92560 729 aa11.73□□□□□ -0.53
SSB-212ENST00000494051 EPS8L1Q8TE68 723 aa11.72□□□□□ -0.53
SSB-212ENST00000494051 LCE2BO14633 110 aa11.71□□□□□ -0.53
SSB-212ENST00000494051 FOXC1Q12948 553 aa11.7□□□□□ -0.54
SSB-212ENST00000494051 MTMR14Q8NCE2 650 aa11.7□□□□□ -0.54
SSB-212ENST00000494051 ARMC2Q8NEN0 867 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms