RNA–Protein interactions for RNA: ENST00000493991.5

COL2A1-208, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 3,756 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-208ENST00000493991 DUSP27Q5VZP5 1158 aa13.94□□□□□ -0.18
COL2A1-208ENST00000493991 TAOK2Q9UL54 1235 aa13.94□□□□□ -0.18
COL2A1-208ENST00000493991 SLFN5Q08AF3 891 aa13.93□□□□□ -0.18
COL2A1-208ENST00000493991 DZIP1LQ8IYY4 767 aaKnown RBP13.93□□□□□ -0.18
COL2A1-208ENST00000493991 NFKBIBQ15653 356 aa13.93□□□□□ -0.18
COL2A1-208ENST00000493991 ANKRD45Q5TZF3 282 aa13.93□□□□□ -0.18
COL2A1-208ENST00000493991 KDM5BQ9UGL1 1544 aa13.93□□□□□ -0.18
COL2A1-208ENST00000493991 A2MP01023 1474 aa13.93□□□□□ -0.18
COL2A1-208ENST00000493991 RALGAPBQ86X10 1494 aa13.93□□□□□ -0.18
COL2A1-208ENST00000493991 C14orf93Q9H972 538 aaKnown RBP13.92□□□□□ -0.18
COL2A1-208ENST00000493991 MIS18AQ9NYP9 233 aa13.92□□□□□ -0.18
COL2A1-208ENST00000493991 SPATA31E1Q6ZUB1 1445 aa13.92□□□□□ -0.18
COL2A1-208ENST00000493991 NLRP6P59044 892 aa13.92□□□□□ -0.18
COL2A1-208ENST00000493991 VSIG10Q8N0Z9 540 aa13.92□□□□□ -0.18
COL2A1-208ENST00000493991 ZNF330Q9Y3S2 320 aaPredicted RBP13.92□□□□□ -0.18
COL2A1-208ENST00000493991 ABCC10Q5T3U5 1492 aa13.91□□□□□ -0.18
COL2A1-208ENST00000493991 SULT6B1Q6IMI4 303 aa13.91□□□□□ -0.18
COL2A1-208ENST00000493991 FRAT2O75474 233 aaPredicted RBP13.91□□□□□ -0.18
COL2A1-208ENST00000493991 EIF2S2P20042 333 aaKnown RBP13.91□□□□□ -0.18
COL2A1-208ENST00000493991 FAM161AQ3B820 660 aa13.9□□□□□ -0.18
COL2A1-208ENST00000493991 MS4A1P11836 297 aa13.9□□□□□ -0.18
COL2A1-208ENST00000493991 NCLP19338 710 aaKnown RBP13.9□□□□□ -0.18
COL2A1-208ENST00000493991 CSB-PGBD3P0DP91 1061 aa13.9□□□□□ -0.19
COL2A1-208ENST00000493991 OS9Q13438 667 aaPredicted RBP13.89□□□□□ -0.19
COL2A1-208ENST00000493991 WDR7Q9Y4E6 1490 aa13.89□□□□□ -0.19
COL2A1-208ENST00000493991 NOL8Q76FK4 1167 aaKnown RBP13.88□□□□□ -0.19
COL2A1-208ENST00000493991 NOB1Q9ULX3 412 aaKnown RBP13.88□□□□□ -0.19
COL2A1-208ENST00000493991 PLEKHH1Q9ULM0 1364 aa13.88□□□□□ -0.19
COL2A1-208ENST00000493991 NGEFQ8N5V2 710 aa13.88□□□□□ -0.19
COL2A1-208ENST00000493991 SCAF11Q99590 1463 aaKnown RBP13.88□□□□□ -0.19
COL2A1-208ENST00000493991 NUDT16Q96DE0 195 aaKnown RBP13.87□□□□□ -0.19
COL2A1-208ENST00000493991 ITSN2Q9NZM3 1697 aa13.87□□□□□ -0.19
COL2A1-208ENST00000493991 HSP90AB1P08238 724 aaKnown RBP13.86□□□□□ -0.19
COL2A1-208ENST00000493991 TMPOP42166 694 aaKnown RBP13.86□□□□□ -0.19
COL2A1-208ENST00000493991 ABCC2Q92887 1545 aa13.86□□□□□ -0.19
COL2A1-208ENST00000493991 FAM83GA6ND36 823 aa13.86□□□□□ -0.19
COL2A1-208ENST00000493991 PARD3Q8TEW0 1356 aa13.86□□□□□ -0.19
COL2A1-208ENST00000493991 ADGRL2O95490 1459 aa13.86□□□□□ -0.19
COL2A1-208ENST00000493991 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.85□□□□□ -0.19
COL2A1-208ENST00000493991 BACH2Q9BYV9 841 aa13.85□□□□□ -0.19
COL2A1-208ENST00000493991 TRIM44Q96DX7 344 aaPredicted RBP13.84□□□□□ -0.19
COL2A1-208ENST00000493991 PDZRN3Q9UPQ7 1066 aa13.84□□□□□ -0.19
COL2A1-208ENST00000493991 ARHGEF12Q9NZN5 1544 aa13.84□□□□□ -0.19
COL2A1-208ENST00000493991 FYB1O15117 783 aa13.84□□□□□ -0.19
COL2A1-208ENST00000493991 ABTB2Q8N961 1025 aa13.84□□□□□ -0.19
COL2A1-208ENST00000493991 STK31Q9BXU1 1019 aa13.84□□□□□ -0.19
COL2A1-208ENST00000493991 CCDC9Q9Y3X0 531 aaKnown RBP13.84□□□□□ -0.19
COL2A1-208ENST00000493991 DUOX2Q9NRD8 1548 aa13.84□□□□□ -0.19
COL2A1-208ENST00000493991 RTEL1-TNFRSF6BF6WH68 1400 aa13.84□□□□□ -0.19
COL2A1-208ENST00000493991 PSME1Q06323 249 aa13.84□□□□□ -0.19
COL2A1-208ENST00000493991 MCM10Q7L590 875 aa13.84□□□□□ -0.19
COL2A1-208ENST00000493991 SSH1Q8WYL5 1049 aa13.84□□□□□ -0.19
COL2A1-208ENST00000493991 CCDC61Q9Y6R9 512 aa13.83□□□□□ -0.2
COL2A1-208ENST00000493991 PLA2R1Q13018 1463 aa13.83□□□□□ -0.2
COL2A1-208ENST00000493991 IGHDP01880 384 aa13.82□□□□□ -0.2
COL2A1-208ENST00000493991 CALD1Q05682 793 aaKnown RBP13.82□□□□□ -0.2
COL2A1-208ENST00000493991 FOXD4L5Q5VV16 416 aaPredicted RBP13.82□□□□□ -0.2
COL2A1-208ENST00000493991 FOXD4L4Q8WXT5 416 aaPredicted RBP13.82□□□□□ -0.2
COL2A1-208ENST00000493991 UGGT1Q9NYU2 1555 aa13.82□□□□□ -0.2
COL2A1-208ENST00000493991 RARSP54136 660 aaKnown RBP13.82□□□□□ -0.2
COL2A1-208ENST00000493991 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.82□□□□□ -0.2
COL2A1-208ENST00000493991 ABCA8O94911 1581 aa13.82□□□□□ -0.2
COL2A1-208ENST00000493991 ESCO1Q5FWF5 840 aa13.82□□□□□ -0.2
COL2A1-208ENST00000493991 RPGRIP1LQ68CZ1 1315 aa13.82□□□□□ -0.2
COL2A1-208ENST00000493991 LRRIQ1Q96JM4 1722 aa13.81□□□□□ -0.2
COL2A1-208ENST00000493991 USHBP1Q8N6Y0 703 aa13.81□□□□□ -0.2
COL2A1-208ENST00000493991 TSPYL4Q9UJ04 414 aa13.81□□□□□ -0.2
COL2A1-208ENST00000493991 HSCBQ8IWL3 235 aa13.8□□□□□ -0.2
COL2A1-208ENST00000493991 ANP32BQ92688 251 aaKnown RBP13.8□□□□□ -0.2
COL2A1-208ENST00000493991 SHANK2Q9UPX8 1470 aa13.8□□□□□ -0.2
COL2A1-208ENST00000493991 TRIM6-TRIM34B2RNG4 842 aa13.8□□□□□ -0.2
COL2A1-208ENST00000493991 TWISTNBQ3B726 338 aaPredicted RBP13.8□□□□□ -0.2
COL2A1-208ENST00000493991 DDX19BQ9UMR2 479 aa13.8□□□□□ -0.2
COL2A1-208ENST00000493991 FKBP5Q13451 457 aaPredicted RBP13.8□□□□□ -0.2
COL2A1-208ENST00000493991 FOXD4L6Q3SYB3 417 aaPredicted RBP13.8□□□□□ -0.2
COL2A1-208ENST00000493991 FOXD4L3Q6VB84 417 aaPredicted RBP13.8□□□□□ -0.2
COL2A1-208ENST00000493991 TTC37Q6PGP7 1564 aa13.8□□□□□ -0.2
COL2A1-208ENST00000493991 SAMD9LQ8IVG5 1584 aa13.79□□□□□ -0.2
COL2A1-208ENST00000493991 TMEM57Q8N5G2 664 aa13.79□□□□□ -0.2
COL2A1-208ENST00000493991 RLBP1P12271 317 aa13.79□□□□□ -0.2
COL2A1-208ENST00000493991 USP35Q9P2H5 1018 aa13.78□□□□□ -0.2
COL2A1-208ENST00000493991 UHRF1BP1Q6BDS2 1440 aa13.78□□□□□ -0.2
COL2A1-208ENST00000493991 AEBP1Q8IUX7 1158 aa13.78□□□□□ -0.2
COL2A1-208ENST00000493991 LMOD3Q0VAK6 560 aa13.78□□□□□ -0.2
COL2A1-208ENST00000493991 GNAI1P63096 354 aa13.77□□□□□ -0.21
COL2A1-208ENST00000493991 KRT24Q2M2I5 525 aa13.77□□□□□ -0.21
COL2A1-208ENST00000493991 AMOTL2Q9Y2J4 779 aa13.77□□□□□ -0.21
COL2A1-208ENST00000493991 GCC2Q8IWJ2 1684 aa13.77□□□□□ -0.21
COL2A1-208ENST00000493991 WASLO00401 505 aaPredicted RBP13.77□□□□□ -0.21
COL2A1-208ENST00000493991 HSP90AB2PQ58FF8 381 aa13.77□□□□□ -0.21
COL2A1-208ENST00000493991 ATF7IPQ6VMQ6 1270 aa13.76□□□□□ -0.21
COL2A1-208ENST00000493991 PHACTR3Q96KR7 559 aa13.76□□□□□ -0.21
COL2A1-208ENST00000493991 PDE3AQ14432 1141 aa13.76□□□□□ -0.21
COL2A1-208ENST00000493991 TEFQ10587 303 aa13.76□□□□□ -0.21
COL2A1-208ENST00000493991 RILPL2Q969X0 211 aa13.76□□□□□ -0.21
COL2A1-208ENST00000493991 PCDHB15Q9Y5E8 787 aa13.76□□□□□ -0.21
COL2A1-208ENST00000493991 SLC4A2P04920 1241 aa13.75□□□□□ -0.21
COL2A1-208ENST00000493991 AIMP1Q12904 312 aaKnown RBP13.75□□□□□ -0.21
COL2A1-208ENST00000493991 ZNF518AQ6AHZ1 1483 aa13.75□□□□□ -0.21
COL2A1-208ENST00000493991 FOXO3O43524 673 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms