RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 NFKBIBQ15653 356 aa24.29■■□□□ 1.48
RNF40-203ENST00000493683 HSP90B2PQ58FF3 399 aa24.28■■□□□ 1.48
RNF40-203ENST00000493683 OLFM4Q6UX06 510 aa24.27■■□□□ 1.48
RNF40-203ENST00000493683 NASPP49321 788 aaPredicted RBP24.26■■□□□ 1.47
RNF40-203ENST00000493683 RALYLQ86SE5 291 aaKnown RBP24.26■■□□□ 1.47
RNF40-203ENST00000493683 LNPKQ9C0E8 428 aa24.26■■□□□ 1.47
RNF40-203ENST00000493683 TSPYL4Q9UJ04 414 aa24.26■■□□□ 1.47
RNF40-203ENST00000493683 DHX8Q14562 1220 aaKnown RBP24.26■■□□□ 1.47
RNF40-203ENST00000493683 FGD6Q6ZV73 1430 aa24.26■■□□□ 1.47
RNF40-203ENST00000493683 ERCC4Q92889 916 aaPredicted RBP24.25■■□□□ 1.47
RNF40-203ENST00000493683 BRMS1Q9HCU9 246 aa24.25■■□□□ 1.47
RNF40-203ENST00000493683 CTDP1Q9Y5B0 961 aaPredicted RBP24.25■■□□□ 1.47
RNF40-203ENST00000493683 CCP110O43303 1012 aa24.24■■□□□ 1.47
RNF40-203ENST00000493683 VPS37DQ86XT2 251 aa24.24■■□□□ 1.47
RNF40-203ENST00000493683 XBP1P17861 261 aa24.24■■□□□ 1.47
RNF40-203ENST00000493683 CNTROBQ8N137 903 aa24.23■■□□□ 1.47
RNF40-203ENST00000493683 WASHC2AQ641Q2 1341 aa24.23■■□□□ 1.47
RNF40-203ENST00000493683 PDCP20941 246 aa24.22■■□□□ 1.47
RNF40-203ENST00000493683 GNAI3P08754 354 aa24.22■■□□□ 1.47
RNF40-203ENST00000493683 HIP1O00291 1037 aa24.21■■□□□ 1.47
RNF40-203ENST00000493683 UBTFL1P0CB47 393 aaPredicted RBP24.21■■□□□ 1.47
RNF40-203ENST00000493683 DHX16O60231 1041 aaKnown RBP24.2■■□□□ 1.46
RNF40-203ENST00000493683 ATAD2BQ9ULI0 1458 aa24.2■■□□□ 1.46
RNF40-203ENST00000493683 RABEP1Q15276 862 aa24.2■■□□□ 1.46
RNF40-203ENST00000493683 SCAPERQ9BY12 1400 aa24.2■■□□□ 1.46
RNF40-203ENST00000493683 HMGN5P82970 282 aaKnown RBP24.19■■□□□ 1.46
RNF40-203ENST00000493683 CCDC173Q0VFZ6 552 aa24.19■■□□□ 1.46
RNF40-203ENST00000493683 CWC15Q9P013 229 aaKnown RBP24.19■■□□□ 1.46
RNF40-203ENST00000493683 RRP12Q5JTH9 1297 aaKnown RBP24.17■■□□□ 1.46
RNF40-203ENST00000493683 GCC1Q96CN9 775 aa24.17■■□□□ 1.46
RNF40-203ENST00000493683 TRAK2O60296 914 aa24.17■■□□□ 1.46
RNF40-203ENST00000493683 PDE3AQ14432 1141 aa24.17■■□□□ 1.46
RNF40-203ENST00000493683 SDF4Q9BRK5 362 aa24.16■■□□□ 1.46
RNF40-203ENST00000493683 CCDC43Q96MW1 224 aaKnown RBP24.16■■□□□ 1.46
RNF40-203ENST00000493683 MYO6Q9UM54 1294 aa24.16■■□□□ 1.46
RNF40-203ENST00000493683 DCTN1Q14203 1278 aa24.15■■□□□ 1.46
RNF40-203ENST00000493683 FANCD2Q9BXW9 1451 aa24.15■■□□□ 1.46
RNF40-203ENST00000493683 PANK1Q8TE04 598 aa24.15■■□□□ 1.46
RNF40-203ENST00000493683 PSME1Q06323 249 aa24.15■■□□□ 1.46
RNF40-203ENST00000493683 CLASRPQ8N2M8 674 aaKnown RBP24.14■■□□□ 1.46
RNF40-203ENST00000493683 PIP4K2AP48426 406 aaPredicted RBP24.14■■□□□ 1.45
RNF40-203ENST00000493683 RIC3Q7Z5B4 369 aa24.14■■□□□ 1.45
RNF40-203ENST00000493683 NAP1L1P55209 391 aaKnown RBP24.14■■□□□ 1.45
RNF40-203ENST00000493683 TSPY26PQ9H489 355 aa24.14■■□□□ 1.45
RNF40-203ENST00000493683 RAPGEF4Q8WZA2 1011 aa24.13■■□□□ 1.45
RNF40-203ENST00000493683 CWC22Q9HCG8 908 aaKnown RBP24.13■■□□□ 1.45
RNF40-203ENST00000493683 SART3Q15020 963 aaKnown RBP24.13■■□□□ 1.45
RNF40-203ENST00000493683 NECTIN2Q92692 538 aa24.13■■□□□ 1.45
RNF40-203ENST00000493683 FYCO1Q9BQS8 1478 aa24.12■■□□□ 1.45
RNF40-203ENST00000493683 RRBP1Q9P2E9 1410 aaKnown RBP24.12■■□□□ 1.45
RNF40-203ENST00000493683 ERC1Q8IUD2 1116 aa24.12■■□□□ 1.45
RNF40-203ENST00000493683 CCDC30Q5VVM6 783 aa24.12■■□□□ 1.45
RNF40-203ENST00000493683 R3HCC1Q9Y3T6 440 aaKnown RBP24.12■■□□□ 1.45
RNF40-203ENST00000493683 SMARCA4P51532 1647 aa24.12■■□□□ 1.45
RNF40-203ENST00000493683 CT47B1P0C2W7 299 aaPredicted RBP24.12■■□□□ 1.45
RNF40-203ENST00000493683 CCDC66A2RUB6 948 aa24.11■■□□□ 1.45
RNF40-203ENST00000493683 KINO60870 393 aaKnown RBP24.11■■□□□ 1.45
RNF40-203ENST00000493683 ANKRD50Q9ULJ7 1429 aa24.11■■□□□ 1.45
RNF40-203ENST00000493683 RDXP35241 583 aaKnown RBP24.11■■□□□ 1.45
RNF40-203ENST00000493683 CT47A1Q5JQC4 288 aaPredicted RBP24.11■■□□□ 1.45
RNF40-203ENST00000493683 WASHC4Q2M389 1173 aa24.11■■□□□ 1.45
RNF40-203ENST00000493683 SMARCE1Q969G3 411 aa24.11■■□□□ 1.45
RNF40-203ENST00000493683 ZNF396Q96N95 335 aaPredicted RBP24.11■■□□□ 1.45
RNF40-203ENST00000493683 GAS2L2Q8NHY3 880 aa24.1■■□□□ 1.45
RNF40-203ENST00000493683 RAD21O60216 631 aa24.1■■□□□ 1.45
RNF40-203ENST00000493683 OFD1O75665 1012 aa24.1■■□□□ 1.45
RNF40-203ENST00000493683 PATL2C9JE40 543 aaKnown RBP24.1■■□□□ 1.45
RNF40-203ENST00000493683 FILIP1LQ4L180 1135 aa24.09■■□□□ 1.45
RNF40-203ENST00000493683 TRIM5Q9C035 493 aa24.09■■□□□ 1.45
RNF40-203ENST00000493683 FSD1Q9BTV5 496 aa24.09■■□□□ 1.45
RNF40-203ENST00000493683 MSH5O43196 834 aa24.09■■□□□ 1.45
RNF40-203ENST00000493683 RUSC2Q8N2Y8 1516 aa24.09■■□□□ 1.45
RNF40-203ENST00000493683 NEUROD6Q96NK8 337 aa24.09■■□□□ 1.45
RNF40-203ENST00000493683 EPS15P42566 896 aa24.08■■□□□ 1.45
RNF40-203ENST00000493683 ADAMTS8Q9UP79 889 aa24.08■■□□□ 1.44
RNF40-203ENST00000493683 LRRC9Q6ZRR7 1453 aa24.07■■□□□ 1.44
RNF40-203ENST00000493683 OSCARQ8IYS5 282 aa24.07■■□□□ 1.44
RNF40-203ENST00000493683 ODF2Q5BJF6 829 aa24.07■■□□□ 1.44
RNF40-203ENST00000493683 TBC1D2BQ9UPU7 963 aa24.07■■□□□ 1.44
RNF40-203ENST00000493683 CAGE1Q8TC20 777 aa24.07■■□□□ 1.44
RNF40-203ENST00000493683 ANO8Q9HCE9 1232 aaPredicted RBP24.06■■□□□ 1.44
RNF40-203ENST00000493683 PDILTQ8N807 584 aa24.06■■□□□ 1.44
RNF40-203ENST00000493683 CAVIN1Q6NZI2 390 aaKnown RBP24.06■■□□□ 1.44
RNF40-203ENST00000493683 AEBP1Q8IUX7 1158 aa24.06■■□□□ 1.44
RNF40-203ENST00000493683 TCP11L2Q8N4U5 519 aa24.06■■□□□ 1.44
RNF40-203ENST00000493683 HMOX1P09601 288 aa24.05■■□□□ 1.44
RNF40-203ENST00000493683 JMYQ8N9B5 988 aa24.05■■□□□ 1.44
RNF40-203ENST00000493683 FBXW7Q969H0 707 aa24.04■■□□□ 1.44
RNF40-203ENST00000493683 NEK4P51957 841 aa24.04■■□□□ 1.44
RNF40-203ENST00000493683 ANKRD1Q15327 319 aa24.04■■□□□ 1.44
RNF40-203ENST00000493683 RBM33Q96EV2 1170 aaKnown RBP24.04■■□□□ 1.44
RNF40-203ENST00000493683 PDZRN3Q9UPQ7 1066 aa24.04■■□□□ 1.44
RNF40-203ENST00000493683 GAPVD1Q14C86 1478 aa24.03■■□□□ 1.44
RNF40-203ENST00000493683 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.03■■□□□ 1.44
RNF40-203ENST00000493683 TXLNAP40222 546 aa24.03■■□□□ 1.44
RNF40-203ENST00000493683 CCDC191Q8NCU4 936 aa24.03■■□□□ 1.44
RNF40-203ENST00000493683 GGNBP2Q9H3C7 697 aa24.03■■□□□ 1.44
RNF40-203ENST00000493683 IGF1RP08069 1367 aa24.03■■□□□ 1.44
RNF40-203ENST00000493683 CALRP27797 417 aaKnown RBP24.02■■□□□ 1.44
RNF40-203ENST00000493683 PPP2R1AP30153 589 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms