RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 USP21Q9UK80 565 aa18.54■□□□□ 0.56
SAMM50-205ENST00000493621 ESCO1Q5FWF5 840 aa18.53■□□□□ 0.56
SAMM50-205ENST00000493621 IFT172Q9UG01 1749 aa18.52■□□□□ 0.55
SAMM50-205ENST00000493621 MARF1Q9Y4F3 1742 aaKnown RBP18.52■□□□□ 0.55
SAMM50-205ENST00000493621 ADGRF5Q8IZF2 1346 aa18.51■□□□□ 0.55
SAMM50-205ENST00000493621 TRPC5Q9UL62 973 aaPredicted RBP18.51■□□□□ 0.55
SAMM50-205ENST00000493621 NPHP3Q7Z494 1330 aa18.5■□□□□ 0.55
SAMM50-205ENST00000493621 RGL3Q3MIN7 710 aa18.5■□□□□ 0.55
SAMM50-205ENST00000493621 FNBP4Q8N3X1 1017 aaPredicted RBP18.5■□□□□ 0.55
SAMM50-205ENST00000493621 STK26Q9P289 416 aa18.5■□□□□ 0.55
SAMM50-205ENST00000493621 PXDNQ92626 1479 aa18.5■□□□□ 0.55
SAMM50-205ENST00000493621 CCDC144AA2RUR9 1427 aa18.49■□□□□ 0.55
SAMM50-205ENST00000493621 XPCQ01831 940 aaPredicted RBP18.49■□□□□ 0.55
SAMM50-205ENST00000493621 ATAD2Q6PL18 1390 aa18.49■□□□□ 0.55
SAMM50-205ENST00000493621 MYOM2P54296 1465 aa18.49■□□□□ 0.55
SAMM50-205ENST00000493621 ATRNO75882 1429 aa18.49■□□□□ 0.55
SAMM50-205ENST00000493621 NUTM2FA1L443 756 aa18.48■□□□□ 0.55
SAMM50-205ENST00000493621 FOXO3O43524 673 aa18.48■□□□□ 0.55
SAMM50-205ENST00000493621 WAPLQ7Z5K2 1190 aa18.48■□□□□ 0.55
SAMM50-205ENST00000493621 KNDC1Q76NI1 1749 aa18.48■□□□□ 0.55
SAMM50-205ENST00000493621 TECPR2O15040 1411 aa18.47■□□□□ 0.55
SAMM50-205ENST00000493621 SPATA31E1Q6ZUB1 1445 aa18.47■□□□□ 0.55
SAMM50-205ENST00000493621 LRPPRCP42704 1394 aaKnown RBP18.46■□□□□ 0.55
SAMM50-205ENST00000493621 ANKRD30BQ9BXX2 1392 aa18.45■□□□□ 0.54
SAMM50-205ENST00000493621 TMEM132EQ6IEE7 984 aa18.45■□□□□ 0.54
SAMM50-205ENST00000493621 FMN2Q9NZ56 1722 aa18.45■□□□□ 0.54
SAMM50-205ENST00000493621 PLEKHH1Q9ULM0 1364 aa18.44■□□□□ 0.54
SAMM50-205ENST00000493621 BCL9LQ86UU0 1499 aa18.44■□□□□ 0.54
SAMM50-205ENST00000493621 ABCC11Q96J66 1382 aa18.43■□□□□ 0.54
SAMM50-205ENST00000493621 MPHOSPH9Q99550 1183 aa18.43■□□□□ 0.54
SAMM50-205ENST00000493621 PIK3C2GO75747 1445 aa18.42■□□□□ 0.54
SAMM50-205ENST00000493621 KIF1AQ12756 1690 aa18.42■□□□□ 0.54
SAMM50-205ENST00000493621 RGPD8O14715 1765 aaPredicted RBP18.42■□□□□ 0.54
SAMM50-205ENST00000493621 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.41■□□□□ 0.54
SAMM50-205ENST00000493621 YTHDC2Q9H6S0 1430 aaKnown RBP18.4■□□□□ 0.54
SAMM50-205ENST00000493621 GJD4Q96KN9 370 aaPredicted RBP18.39■□□□□ 0.53
SAMM50-205ENST00000493621 EP400Q96L91 3159 aa18.39■□□□□ 0.53
SAMM50-205ENST00000493621 SPATA31A3Q5VYP0 1347 aa18.38■□□□□ 0.53
SAMM50-205ENST00000493621 KRT28Q7Z3Y7 464 aa18.36■□□□□ 0.53
SAMM50-205ENST00000493621 USP32Q8NFA0 1604 aa18.36■□□□□ 0.53
SAMM50-205ENST00000493621 GLI3P10071 1580 aa18.35■□□□□ 0.53
SAMM50-205ENST00000493621 SLIT2O94813 1529 aa18.35■□□□□ 0.53
SAMM50-205ENST00000493621 UNC5CLQ8IV45 518 aa18.35■□□□□ 0.53
SAMM50-205ENST00000493621 BRWD3Q6RI45 1802 aa18.35■□□□□ 0.53
SAMM50-205ENST00000493621 RALGAPBQ86X10 1494 aa18.34■□□□□ 0.53
SAMM50-205ENST00000493621 CCDC125Q86Z20 511 aa18.33■□□□□ 0.52
SAMM50-205ENST00000493621 SIRT1Q96EB6 747 aa18.33■□□□□ 0.52
SAMM50-205ENST00000493621 C14orf93Q9H972 538 aaKnown RBP18.33■□□□□ 0.52
SAMM50-205ENST00000493621 ZRANB1Q9UGI0 708 aa18.33■□□□□ 0.52
SAMM50-205ENST00000493621 TNS3Q68CZ2 1445 aa18.32■□□□□ 0.52
SAMM50-205ENST00000493621 DHX57Q6P158 1386 aaKnown RBP18.32■□□□□ 0.52
SAMM50-205ENST00000493621 PLEKHG5O94827 1062 aa18.32■□□□□ 0.52
SAMM50-205ENST00000493621 HAP1P54257 671 aaPredicted RBP18.32■□□□□ 0.52
SAMM50-205ENST00000493621 CFAP70Q5T0N1 1121 aa18.32■□□□□ 0.52
SAMM50-205ENST00000493621 PHF8Q9UPP1 1060 aa18.32■□□□□ 0.52
SAMM50-205ENST00000493621 NRXN1Q9ULB1 1477 aa18.32■□□□□ 0.52
SAMM50-205ENST00000493621 PLCH1Q4KWH8 1693 aa18.31■□□□□ 0.52
SAMM50-205ENST00000493621 SRCAPQ6ZRS2 3230 aa18.31■□□□□ 0.52
SAMM50-205ENST00000493621 SAFB2Q14151 953 aaKnown RBP eCLIP18.31■□□□□ 0.52
SAMM50-205ENST00000493621 ABCA3Q99758 1704 aa18.31■□□□□ 0.52
SAMM50-205ENST00000493621 PSME1Q06323 249 aa18.3■□□□□ 0.52
SAMM50-205ENST00000493621 CABLES1Q8TDN4 633 aa18.3■□□□□ 0.52
SAMM50-205ENST00000493621 PRAM1Q96QH2 718 aa18.3■□□□□ 0.52
SAMM50-205ENST00000493621 NWD2Q9ULI1 1742 aa18.29■□□□□ 0.52
SAMM50-205ENST00000493621 LMOD2Q6P5Q4 547 aa18.28■□□□□ 0.52
SAMM50-205ENST00000493621 SBNO1A3KN83 1393 aa18.27■□□□□ 0.51
SAMM50-205ENST00000493621 ACIN1Q9UKV3 1341 aaKnown RBP18.26■□□□□ 0.51
SAMM50-205ENST00000493621 BLMP54132 1417 aaPredicted RBP18.26■□□□□ 0.51
SAMM50-205ENST00000493621 POGKQ9P215 609 aa18.26■□□□□ 0.51
SAMM50-205ENST00000493621 DLC1Q96QB1 1528 aa18.26■□□□□ 0.51
SAMM50-205ENST00000493621 VPS72Q15906 364 aa18.25■□□□□ 0.51
SAMM50-205ENST00000493621 SEPT12Q8IYM1 358 aa18.25■□□□□ 0.51
SAMM50-205ENST00000493621 PMFBP1Q8TBY8 1022 aa18.25■□□□□ 0.51
SAMM50-205ENST00000493621 CCDC9Q9Y3X0 531 aaKnown RBP18.25■□□□□ 0.51
SAMM50-205ENST00000493621 ARHGEF10O15013 1369 aa18.25■□□□□ 0.51
SAMM50-205ENST00000493621 ADGRB2O60241 1585 aa18.24■□□□□ 0.51
SAMM50-205ENST00000493621 ANKARQ7Z5J8 1434 aa18.23■□□□□ 0.51
SAMM50-205ENST00000493621 TRPM3Q9HCF6 1732 aaPredicted RBP18.23■□□□□ 0.51
SAMM50-205ENST00000493621 ADGRB1O14514 1584 aa18.21■□□□□ 0.51
SAMM50-205ENST00000493621 FAM83GA6ND36 823 aa18.21■□□□□ 0.51
SAMM50-205ENST00000493621 DEFB132Q7Z7B7 95 aa18.21■□□□□ 0.51
SAMM50-205ENST00000493621 HIRIP3Q9BW71 556 aaPredicted RBP18.21■□□□□ 0.51
SAMM50-205ENST00000493621 NRAPQ86VF7 1730 aa18.2■□□□□ 0.5
SAMM50-205ENST00000493621 ALS2Q96Q42 1657 aa18.2■□□□□ 0.5
SAMM50-205ENST00000493621 SF3B2Q13435 895 aaKnown RBP18.2■□□□□ 0.5
SAMM50-205ENST00000493621 TRAK1Q9UPV9 953 aa18.2■□□□□ 0.5
SAMM50-205ENST00000493621 RAB3GAP2Q9H2M9 1393 aa18.19■□□□□ 0.5
SAMM50-205ENST00000493621 ONECUT3O60422 494 aaPredicted RBP18.19■□□□□ 0.5
SAMM50-205ENST00000493621 KRT27Q7Z3Y8 459 aa18.19■□□□□ 0.5
SAMM50-205ENST00000493621 MINK1Q8N4C8 1332 aaPredicted RBP18.19■□□□□ 0.5
SAMM50-205ENST00000493621 A0A0G2JS52 829 aa18.18■□□□□ 0.5
SAMM50-205ENST00000493621 MYT1Q01538 1121 aa18.18■□□□□ 0.5
SAMM50-205ENST00000493621 COL14A1Q05707 1796 aaKnown RBP18.17■□□□□ 0.5
SAMM50-205ENST00000493621 KDM2AQ9Y2K7 1162 aa18.17■□□□□ 0.5
SAMM50-205ENST00000493621 GPRASP1Q5JY77 1395 aa18.17■□□□□ 0.5
SAMM50-205ENST00000493621 BTG4Q9NY30 223 aa18.16■□□□□ 0.5
SAMM50-205ENST00000493621 TULP4Q9NRJ4 1543 aa18.16■□□□□ 0.5
SAMM50-205ENST00000493621 PRR36Q9H6K5 1346 aa18.16■□□□□ 0.5
SAMM50-205ENST00000493621 EIF3AQ14152 1382 aaKnown RBP18.16■□□□□ 0.5
SAMM50-205ENST00000493621 DCAF11Q8TEB1 546 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms