RNA–Protein interactions for RNA: ENST00000493609.1

SMG7-208, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG7, Length 624 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-208ENST00000493609 GRIPAP1Q4V328 841 aa12.1□□□□□ -0.47
SMG7-208ENST00000493609 TUSC1Q2TAM9 212 aa12.09□□□□□ -0.47
SMG7-208ENST00000493609 CABLES1Q8TDN4 633 aa12.09□□□□□ -0.47
SMG7-208ENST00000493609 LILRB3O75022 631 aa12.07□□□□□ -0.48
SMG7-208ENST00000493609 PRR14Q9BWN1 585 aa12.07□□□□□ -0.48
SMG7-208ENST00000493609 NUTM2BA6NNL0 878 aaPredicted RBP12.06□□□□□ -0.48
SMG7-208ENST00000493609 NUTM2EB1AL46 878 aaPredicted RBP12.06□□□□□ -0.48
SMG7-208ENST00000493609 RFC5P40937 340 aa12.06□□□□□ -0.48
SMG7-208ENST00000493609 RTL5Q5HYW3 569 aaPredicted RBP12.06□□□□□ -0.48
SMG7-208ENST00000493609 MORN1Q5T089 497 aa12.06□□□□□ -0.48
SMG7-208ENST00000493609 NUTM2DQ5VT03 806 aaPredicted RBP12.06□□□□□ -0.48
SMG7-208ENST00000493609 PPP1R18Q6NYC8 613 aa12.06□□□□□ -0.48
SMG7-208ENST00000493609 C14orf37Q86TY3 774 aa12.06□□□□□ -0.48
SMG7-208ENST00000493609 NUTM2AQ8IVF1 878 aaPredicted RBP12.06□□□□□ -0.48
SMG7-208ENST00000493609 HRCP23327 699 aa12.05□□□□□ -0.48
SMG7-208ENST00000493609 PPP2R2DQ66LE6 453 aa12.05□□□□□ -0.48
SMG7-208ENST00000493609 SLC27A5Q9Y2P5 690 aa12.05□□□□□ -0.48
SMG7-208ENST00000493609 NKX2-3Q8TAU0 364 aa12.04□□□□□ -0.48
SMG7-208ENST00000493609 SYMPKQ92797 1274 aaKnown RBP12.04□□□□□ -0.48
SMG7-208ENST00000493609 ZBTB3Q9H5J0 574 aa12.04□□□□□ -0.48
SMG7-208ENST00000493609 PRPF38BQ5VTL8 546 aaKnown RBP12.03□□□□□ -0.48
SMG7-208ENST00000493609 PCDHB3Q9Y5E6 796 aa12.03□□□□□ -0.48
SMG7-208ENST00000493609 C6orf229H3BNL8 230 aa12.02□□□□□ -0.49
SMG7-208ENST00000493609 COPS2P61201 443 aa12.02□□□□□ -0.49
SMG7-208ENST00000493609 MTMR2Q13614 643 aa12.01□□□□□ -0.49
SMG7-208ENST00000493609 BLOC1S3Q6QNY0 202 aa12.01□□□□□ -0.49
SMG7-208ENST00000493609 Q6ZNB5 142 aa12.01□□□□□ -0.49
SMG7-208ENST00000493609 PRKD2Q9BZL6 878 aa12.01□□□□□ -0.49
SMG7-208ENST00000493609 EIF4ENIF1Q9NRA8 985 aaKnown RBP12□□□□□ -0.49
SMG7-208ENST00000493609 SCUBE3Q8IX30 993 aa11.99□□□□□ -0.49
SMG7-208ENST00000493609 RNF19BQ6ZMZ0 732 aa11.98□□□□□ -0.49
SMG7-208ENST00000493609 AP1G2O75843 785 aa11.97□□□□□ -0.49
SMG7-208ENST00000493609 FLIIQ13045 1269 aa11.97□□□□□ -0.49
SMG7-208ENST00000493609 TMEM259Q4ZIN3 620 aa11.97□□□□□ -0.49
SMG7-208ENST00000493609 CFAP99D6REC4 459 aa11.96□□□□□ -0.49
SMG7-208ENST00000493609 GFRA3O60609 400 aa11.96□□□□□ -0.49
SMG7-208ENST00000493609 ERICH6Q7L0X2 663 aa11.96□□□□□ -0.49
SMG7-208ENST00000493609 SNRKQ9NRH2 765 aa11.96□□□□□ -0.49
SMG7-208ENST00000493609 NR1I2O75469 434 aa11.95□□□□□ -0.5
SMG7-208ENST00000493609 MCM6Q14566 821 aa11.95□□□□□ -0.5
SMG7-208ENST00000493609 Q3C1V9 767 aa11.95□□□□□ -0.5
SMG7-208ENST00000493609 TSC1Q92574 1164 aa11.95□□□□□ -0.5
SMG7-208ENST00000493609 SPDYE5A6NIY4 337 aa11.94□□□□□ -0.5
SMG7-208ENST00000493609 ZPR1O75312 459 aa11.94□□□□□ -0.5
SMG7-208ENST00000493609 BRICD5Q6PL45 260 aa11.94□□□□□ -0.5
SMG7-208ENST00000493609 BANK1Q8NDB2 785 aa11.94□□□□□ -0.5
SMG7-208ENST00000493609 PRR7Q8TB68 274 aa11.94□□□□□ -0.5
SMG7-208ENST00000493609 THAP11Q96EK4 314 aa11.93□□□□□ -0.5
SMG7-208ENST00000493609 V9GY48 417 aaPredicted RBP11.93□□□□□ -0.5
SMG7-208ENST00000493609 CTDSPL2Q05D32 466 aa11.92□□□□□ -0.5
SMG7-208ENST00000493609 LAPTM4AQ15012 233 aa11.92□□□□□ -0.5
SMG7-208ENST00000493609 RETREG3Q86VR2 466 aa11.92□□□□□ -0.5
SMG7-208ENST00000493609 LCE2BO14633 110 aa11.91□□□□□ -0.5
SMG7-208ENST00000493609 FMNL1O95466 1100 aaPredicted RBP11.91□□□□□ -0.5
SMG7-208ENST00000493609 SALL2Q9Y467 1007 aaPredicted RBP11.91□□□□□ -0.5
SMG7-208ENST00000493609 USP17L8P0C7I0 530 aa11.9□□□□□ -0.5
SMG7-208ENST00000493609 USB1Q9BQ65 265 aaKnown RBP11.9□□□□□ -0.5
SMG7-208ENST00000493609 GGCXP38435 758 aa11.89□□□□□ -0.51
SMG7-208ENST00000493609 HELBQ8NG08 1087 aaPredicted RBP11.89□□□□□ -0.51
SMG7-208ENST00000493609 MTMR14Q8NCE2 650 aa11.88□□□□□ -0.51
SMG7-208ENST00000493609 TLL1O43897 1013 aa11.87□□□□□ -0.51
SMG7-208ENST00000493609 UBTFP17480 764 aaKnown RBP11.87□□□□□ -0.51
SMG7-208ENST00000493609 SPSB2Q99619 263 aa11.87□□□□□ -0.51
SMG7-208ENST00000493609 ZMYND15Q9H091 742 aa11.87□□□□□ -0.51
SMG7-208ENST00000493609 LRRN4Q8WUT4 740 aa11.86□□□□□ -0.51
SMG7-208ENST00000493609 CLUAP1Q96AJ1 413 aa11.86□□□□□ -0.51
SMG7-208ENST00000493609 PER1O15534 1290 aaPredicted RBP11.85□□□□□ -0.51
SMG7-208ENST00000493609 TRAF7Q6Q0C0 670 aa11.85□□□□□ -0.51
SMG7-208ENST00000493609 FAM160A2Q8N612 972 aaPredicted RBP11.85□□□□□ -0.51
SMG7-208ENST00000493609 NRG2O14511 850 aaPredicted RBP11.84□□□□□ -0.51
SMG7-208ENST00000493609 POM121Q96HA1 1249 aa11.84□□□□□ -0.51
SMG7-208ENST00000493609 HMX1Q9NP08 348 aaPredicted RBP11.84□□□□□ -0.51
SMG7-208ENST00000493609 RNF223E7ERA6 249 aa11.83□□□□□ -0.52
SMG7-208ENST00000493609 DESI1Q6ICB0 168 aa11.82□□□□□ -0.52
SMG7-208ENST00000493609 PRDM9Q9NQV7 894 aa11.82□□□□□ -0.52
SMG7-208ENST00000493609 EMID1Q96A84 441 aaPredicted RBP11.81□□□□□ -0.52
SMG7-208ENST00000493609 PDZRN3Q9UPQ7 1066 aa11.81□□□□□ -0.52
SMG7-208ENST00000493609 ADH1BP00325 375 aa11.8□□□□□ -0.52
SMG7-208ENST00000493609 MSS51Q4VC12 460 aa11.8□□□□□ -0.52
SMG7-208ENST00000493609 LYPD8Q6UX82 237 aa11.8□□□□□ -0.52
SMG7-208ENST00000493609 PPEF1O14829 653 aaPredicted RBP11.79□□□□□ -0.52
SMG7-208ENST00000493609 JUNDP17535 347 aa11.79□□□□□ -0.52
SMG7-208ENST00000493609 GJD4Q96KN9 370 aaPredicted RBP11.79□□□□□ -0.52
SMG7-208ENST00000493609 COG6Q9Y2V7 657 aa11.79□□□□□ -0.52
SMG7-208ENST00000493609 EPS8L1Q8TE68 723 aa11.78□□□□□ -0.52
SMG7-208ENST00000493609 TRIM34Q9BYJ4 488 aa11.78□□□□□ -0.52
SMG7-208ENST00000493609 GDPD2Q9HCC8 539 aa11.78□□□□□ -0.52
SMG7-208ENST00000493609 RAD21O60216 631 aa11.77□□□□□ -0.53
SMG7-208ENST00000493609 S1PR4O95977 384 aa11.77□□□□□ -0.53
SMG7-208ENST00000493609 SLC19A1P41440 591 aa11.77□□□□□ -0.53
SMG7-208ENST00000493609 SUPT5HO00267 1087 aaKnown RBP11.76□□□□□ -0.53
SMG7-208ENST00000493609 SOCS7O14512 581 aa11.76□□□□□ -0.53
SMG7-208ENST00000493609 DXOO77932 396 aaKnown RBP11.76□□□□□ -0.53
SMG7-208ENST00000493609 NR6A1Q15406 480 aa11.76□□□□□ -0.53
SMG7-208ENST00000493609 TBC1D2BQ9UPU7 963 aa11.76□□□□□ -0.53
SMG7-208ENST00000493609 A6NJR5 290 aa11.75□□□□□ -0.53
SMG7-208ENST00000493609 MMP16P51512 607 aa11.75□□□□□ -0.53
SMG7-208ENST00000493609 SLC6A16Q9GZN6 736 aa11.75□□□□□ -0.53
SMG7-208ENST00000493609 APBB1O00213 710 aa11.74□□□□□ -0.53
SMG7-208ENST00000493609 TRIM67Q6ZTA4 783 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms