RNA–Protein interactions for RNA: ENST00000493583.5

TFE3-204, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 3,279 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-204ENST00000493583 HSP90AA1P07900 732 aaKnown RBP17.52■□□□□ 0.4
TFE3-204ENST00000493583 NUTM2FA1L443 756 aa17.51■□□□□ 0.39
TFE3-204ENST00000493583 ADGRL1O94910 1474 aa17.51■□□□□ 0.39
TFE3-204ENST00000493583 APBB1O00213 710 aa17.51■□□□□ 0.39
TFE3-204ENST00000493583 C22orf23Q9BZE7 217 aa17.51■□□□□ 0.39
TFE3-204ENST00000493583 RBM42Q9BTD8 480 aaKnown RBP17.5■□□□□ 0.39
TFE3-204ENST00000493583 PREX2Q70Z35 1606 aa17.5■□□□□ 0.39
TFE3-204ENST00000493583 TRAK2O60296 914 aa17.5■□□□□ 0.39
TFE3-204ENST00000493583 FBXO31Q5XUX0 539 aaPredicted RBP17.5■□□□□ 0.39
TFE3-204ENST00000493583 ASXL2Q76L83 1435 aa17.49■□□□□ 0.39
TFE3-204ENST00000493583 SRPK2P78362 688 aaKnown RBP17.49■□□□□ 0.39
TFE3-204ENST00000493583 EXOSC9Q06265 439 aaKnown RBP17.49■□□□□ 0.39
TFE3-204ENST00000493583 TRMT2AQ8IZ69 625 aaKnown RBP17.49■□□□□ 0.39
TFE3-204ENST00000493583 ANTXR1Q9H6X2 564 aa17.49■□□□□ 0.39
TFE3-204ENST00000493583 MINK1Q8N4C8 1332 aaPredicted RBP17.49■□□□□ 0.39
TFE3-204ENST00000493583 MCM4P33991 863 aa17.49■□□□□ 0.39
TFE3-204ENST00000493583 HSP90AA2PQ14568 343 aaPredicted RBP17.48■□□□□ 0.39
TFE3-204ENST00000493583 TBC1D32Q96NH3 1257 aa17.48■□□□□ 0.39
TFE3-204ENST00000493583 PNNQ9H307 717 aaKnown RBP17.48■□□□□ 0.39
TFE3-204ENST00000493583 CDCA8Q53HL2 280 aa17.48■□□□□ 0.39
TFE3-204ENST00000493583 GGNBP2Q9H3C7 697 aa17.48■□□□□ 0.39
TFE3-204ENST00000493583 ZCCHC11Q5TAX3 1644 aaKnown RBP17.47■□□□□ 0.39
TFE3-204ENST00000493583 THUMPD2Q9BTF0 503 aaKnown RBP17.47■□□□□ 0.39
TFE3-204ENST00000493583 MAPK8IP3Q9UPT6 1336 aa17.46■□□□□ 0.39
TFE3-204ENST00000493583 FOXD4L5Q5VV16 416 aaPredicted RBP17.46■□□□□ 0.39
TFE3-204ENST00000493583 FOXD4L4Q8WXT5 416 aaPredicted RBP17.46■□□□□ 0.39
TFE3-204ENST00000493583 TRPM1Q7Z4N2 1603 aa17.46■□□□□ 0.39
TFE3-204ENST00000493583 SOX12O15370 315 aa17.46■□□□□ 0.39
TFE3-204ENST00000493583 NCLP19338 710 aaKnown RBP17.46■□□□□ 0.39
TFE3-204ENST00000493583 PDE3AQ14432 1141 aa17.46■□□□□ 0.39
TFE3-204ENST00000493583 RWDD1Q9H446 243 aaPredicted RBP17.45■□□□□ 0.38
TFE3-204ENST00000493583 CHAMP1Q96JM3 812 aa17.45■□□□□ 0.38
TFE3-204ENST00000493583 EIF3AQ14152 1382 aaKnown RBP17.44■□□□□ 0.38
TFE3-204ENST00000493583 GPRASP1Q5JY77 1395 aa17.44■□□□□ 0.38
TFE3-204ENST00000493583 E9PCH4 1651 aa17.44■□□□□ 0.38
TFE3-204ENST00000493583 PMFBP1Q8TBY8 1022 aa17.44■□□□□ 0.38
TFE3-204ENST00000493583 MYO5CQ9NQX4 1742 aa17.44■□□□□ 0.38
TFE3-204ENST00000493583 ARHGEF5Q12774 1597 aa17.43■□□□□ 0.38
TFE3-204ENST00000493583 NOB1Q9ULX3 412 aaKnown RBP17.43■□□□□ 0.38
TFE3-204ENST00000493583 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.43■□□□□ 0.38
TFE3-204ENST00000493583 DZIP1LQ8IYY4 767 aaKnown RBP17.43■□□□□ 0.38
TFE3-204ENST00000493583 SSH1Q8WYL5 1049 aa17.43■□□□□ 0.38
TFE3-204ENST00000493583 RUNDC1Q96C34 613 aa17.43■□□□□ 0.38
TFE3-204ENST00000493583 NOS1P29475 1434 aa17.43■□□□□ 0.38
TFE3-204ENST00000493583 DUOX2Q9NRD8 1548 aa17.43■□□□□ 0.38
TFE3-204ENST00000493583 CD2BP2O95400 341 aaKnown RBP17.42■□□□□ 0.38
TFE3-204ENST00000493583 HSP90AB1P08238 724 aaKnown RBP17.42■□□□□ 0.38
TFE3-204ENST00000493583 TRIM27P14373 513 aa17.42■□□□□ 0.38
TFE3-204ENST00000493583 FAM69CQ0P6D2 419 aa17.42■□□□□ 0.38
TFE3-204ENST00000493583 GAS2L3Q86XJ1 694 aa17.41■□□□□ 0.38
TFE3-204ENST00000493583 HSCBQ8IWL3 235 aa17.41■□□□□ 0.38
TFE3-204ENST00000493583 TMEM57Q8N5G2 664 aa17.41■□□□□ 0.38
TFE3-204ENST00000493583 L1TD1Q5T7N2 865 aaKnown RBP17.41■□□□□ 0.38
TFE3-204ENST00000493583 MPNDQ8N594 471 aa17.41■□□□□ 0.38
TFE3-204ENST00000493583 NSD3Q9BZ95 1437 aa17.41■□□□□ 0.38
TFE3-204ENST00000493583 ERBB4Q15303 1308 aa17.4■□□□□ 0.38
TFE3-204ENST00000493583 CD109Q6YHK3 1445 aa17.4■□□□□ 0.38
TFE3-204ENST00000493583 FOXD4L6Q3SYB3 417 aaPredicted RBP17.4■□□□□ 0.38
TFE3-204ENST00000493583 ZKSCAN2Q63HK3 967 aa17.4■□□□□ 0.38
TFE3-204ENST00000493583 FOXD4L3Q6VB84 417 aaPredicted RBP17.4■□□□□ 0.38
TFE3-204ENST00000493583 ATP10AO60312 1499 aa17.4■□□□□ 0.38
TFE3-204ENST00000493583 IDI1Q13907 227 aa17.39■□□□□ 0.38
TFE3-204ENST00000493583 MVPQ14764 893 aaKnown RBP17.39■□□□□ 0.38
TFE3-204ENST00000493583 ANKRD45Q5TZF3 282 aa17.39■□□□□ 0.37
TFE3-204ENST00000493583 MYH16Q9H6N6 1097 aa17.39■□□□□ 0.37
TFE3-204ENST00000493583 INSRP06213 1382 aa17.38■□□□□ 0.37
TFE3-204ENST00000493583 ASXL1Q8IXJ9 1541 aa17.38■□□□□ 0.37
TFE3-204ENST00000493583 PRDM15P57071 1507 aaPredicted RBP17.37■□□□□ 0.37
TFE3-204ENST00000493583 HMOX1P09601 288 aa17.36■□□□□ 0.37
TFE3-204ENST00000493583 TRIM44Q96DX7 344 aaPredicted RBP17.36■□□□□ 0.37
TFE3-204ENST00000493583 CHMP5Q9NZZ3 219 aa17.36■□□□□ 0.37
TFE3-204ENST00000493583 ATAD2Q6PL18 1390 aa17.36■□□□□ 0.37
TFE3-204ENST00000493583 TNPO1Q92973 898 aaKnown RBP17.36■□□□□ 0.37
TFE3-204ENST00000493583 GRPEL1Q9HAV7 217 aa17.35■□□□□ 0.37
TFE3-204ENST00000493583 RBM10P98175 930 aaKnown RBP17.35■□□□□ 0.37
TFE3-204ENST00000493583 WAPLQ7Z5K2 1190 aa17.34■□□□□ 0.37
TFE3-204ENST00000493583 ABCC1P33527 1531 aa17.34■□□□□ 0.37
TFE3-204ENST00000493583 RIPK4P57078 832 aa17.34■□□□□ 0.37
TFE3-204ENST00000493583 NOL8Q76FK4 1167 aaKnown RBP17.34■□□□□ 0.37
TFE3-204ENST00000493583 MAST1Q9Y2H9 1570 aa17.34■□□□□ 0.37
TFE3-204ENST00000493583 DTNBO60941 627 aa17.34■□□□□ 0.37
TFE3-204ENST00000493583 CFAP53Q96M91 514 aa17.33■□□□□ 0.37
TFE3-204ENST00000493583 SSFA2P28290 1259 aa17.33■□□□□ 0.36
TFE3-204ENST00000493583 PRAM1Q96QH2 718 aa17.33■□□□□ 0.36
TFE3-204ENST00000493583 SCAF11Q99590 1463 aaKnown RBP17.32■□□□□ 0.36
TFE3-204ENST00000493583 NCKAP5LQ9HCH0 1330 aa17.32■□□□□ 0.36
TFE3-204ENST00000493583 NLRP1Q9C000 1473 aa17.31■□□□□ 0.36
TFE3-204ENST00000493583 ATP7AQ04656 1500 aa17.31■□□□□ 0.36
TFE3-204ENST00000493583 PIK3C2GO75747 1445 aa17.29■□□□□ 0.36
TFE3-204ENST00000493583 ESPNB1AK53 854 aa17.29■□□□□ 0.36
TFE3-204ENST00000493583 PKP1Q13835 747 aa17.28■□□□□ 0.36
TFE3-204ENST00000493583 ATF7IPQ6VMQ6 1270 aa17.28■□□□□ 0.36
TFE3-204ENST00000493583 C16orf71Q8IYS4 520 aaPredicted RBP17.28■□□□□ 0.36
TFE3-204ENST00000493583 CLTCL1P53675 1640 aa17.28■□□□□ 0.36
TFE3-204ENST00000493583 DCTN1Q14203 1278 aa17.27■□□□□ 0.36
TFE3-204ENST00000493583 TSPYL6Q8N831 410 aa17.27■□□□□ 0.36
TFE3-204ENST00000493583 ZFYVE16Q7Z3T8 1539 aa17.27■□□□□ 0.36
TFE3-204ENST00000493583 UHRF1BP1LA0JNW5 1464 aa17.27■□□□□ 0.36
TFE3-204ENST00000493583 TMPOP42166 694 aaKnown RBP17.27■□□□□ 0.36
TFE3-204ENST00000493583 ESF1Q9H501 851 aaKnown RBP17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms