RNA–Protein interactions for RNA: ENST00000493564.1

SGIP1-213, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-213ENST00000493564 NBPF1Q3BBV0 1214 aa13.64□□□□□ -0.23
SGIP1-213ENST00000493564 SIRT1Q96EB6 747 aa13.64□□□□□ -0.23
SGIP1-213ENST00000493564 TECPR2O15040 1411 aa13.64□□□□□ -0.23
SGIP1-213ENST00000493564 C1orf167Q5SNV9 1468 aa13.63□□□□□ -0.23
SGIP1-213ENST00000493564 ESCO1Q5FWF5 840 aa13.63□□□□□ -0.23
SGIP1-213ENST00000493564 ILDR2Q71H61 639 aa13.63□□□□□ -0.23
SGIP1-213ENST00000493564 HIRIP3Q9BW71 556 aaPredicted RBP13.63□□□□□ -0.23
SGIP1-213ENST00000493564 PRAG1Q86YV5 1406 aa13.63□□□□□ -0.23
SGIP1-213ENST00000493564 PHLPP1O60346 1717 aa13.61□□□□□ -0.23
SGIP1-213ENST00000493564 MINK1Q8N4C8 1332 aaPredicted RBP13.61□□□□□ -0.23
SGIP1-213ENST00000493564 ADGRB1O14514 1584 aa13.6□□□□□ -0.23
SGIP1-213ENST00000493564 FOXO3O43524 673 aa13.59□□□□□ -0.23
SGIP1-213ENST00000493564 XPCQ01831 940 aaPredicted RBP13.59□□□□□ -0.23
SGIP1-213ENST00000493564 JCADQ9P266 1359 aa13.58□□□□□ -0.23
SGIP1-213ENST00000493564 MED1Q15648 1581 aaPredicted RBP13.58□□□□□ -0.23
SGIP1-213ENST00000493564 LAMC1P11047 1609 aa13.58□□□□□ -0.24
SGIP1-213ENST00000493564 NUTM2BA6NNL0 878 aaPredicted RBP13.58□□□□□ -0.24
SGIP1-213ENST00000493564 NUTM2EB1AL46 878 aaPredicted RBP13.58□□□□□ -0.24
SGIP1-213ENST00000493564 NUTM2AQ8IVF1 878 aaPredicted RBP13.58□□□□□ -0.24
SGIP1-213ENST00000493564 KNDC1Q76NI1 1749 aa13.57□□□□□ -0.24
SGIP1-213ENST00000493564 LRRC59Q96AG4 307 aaKnown RBP13.57□□□□□ -0.24
SGIP1-213ENST00000493564 COL16A1Q07092 1604 aaPredicted RBP13.56□□□□□ -0.24
SGIP1-213ENST00000493564 AHDC1Q5TGY3 1603 aaPredicted RBP13.55□□□□□ -0.24
SGIP1-213ENST00000493564 NBPF8Q3BBV2 869 aa13.55□□□□□ -0.24
SGIP1-213ENST00000493564 PMFBP1Q8TBY8 1022 aa13.55□□□□□ -0.24
SGIP1-213ENST00000493564 RGS17Q9UGC6 210 aaPredicted RBP13.55□□□□□ -0.24
SGIP1-213ENST00000493564 DLC1Q96QB1 1528 aa13.54□□□□□ -0.24
SGIP1-213ENST00000493564 WASLO00401 505 aaPredicted RBP13.54□□□□□ -0.24
SGIP1-213ENST00000493564 MEX3CQ5U5Q3 659 aaKnown RBP13.54□□□□□ -0.24
SGIP1-213ENST00000493564 CDC42BPGQ6DT37 1551 aa13.54□□□□□ -0.24
SGIP1-213ENST00000493564 PHF8Q9UPP1 1060 aa13.53□□□□□ -0.24
SGIP1-213ENST00000493564 SOS2Q07890 1332 aaPredicted RBP13.53□□□□□ -0.24
SGIP1-213ENST00000493564 TONSLQ96HA7 1378 aa13.53□□□□□ -0.24
SGIP1-213ENST00000493564 PLEKHG5O94827 1062 aa13.52□□□□□ -0.25
SGIP1-213ENST00000493564 KRT28Q7Z3Y7 464 aa13.52□□□□□ -0.25
SGIP1-213ENST00000493564 CDK19Q9BWU1 502 aa13.52□□□□□ -0.25
SGIP1-213ENST00000493564 SPATA31A6Q5VVP1 1343 aa13.52□□□□□ -0.25
SGIP1-213ENST00000493564 NPHP3Q7Z494 1330 aa13.52□□□□□ -0.25
SGIP1-213ENST00000493564 NHSL1Q5SYE7 1610 aa13.5□□□□□ -0.25
SGIP1-213ENST00000493564 PRR36Q9H6K5 1346 aa13.5□□□□□ -0.25
SGIP1-213ENST00000493564 PSME1Q06323 249 aa13.5□□□□□ -0.25
SGIP1-213ENST00000493564 FMN2Q9NZ56 1722 aa13.5□□□□□ -0.25
SGIP1-213ENST00000493564 ROCK2O75116 1388 aaKnown RBP13.49□□□□□ -0.25
SGIP1-213ENST00000493564 PNPLA6Q8IY17 1366 aa13.49□□□□□ -0.25
SGIP1-213ENST00000493564 ADAMTS2O95450 1211 aa13.49□□□□□ -0.25
SGIP1-213ENST00000493564 POTEAQ6S8J7 498 aa13.49□□□□□ -0.25
SGIP1-213ENST00000493564 NUDT16Q96DE0 195 aaKnown RBP13.49□□□□□ -0.25
SGIP1-213ENST00000493564 RGPD8O14715 1765 aaPredicted RBP13.49□□□□□ -0.25
SGIP1-213ENST00000493564 LRP6O75581 1613 aa13.49□□□□□ -0.25
SGIP1-213ENST00000493564 CENPJQ9HC77 1338 aaPredicted RBP13.48□□□□□ -0.25
SGIP1-213ENST00000493564 LMOD2Q6P5Q4 547 aa13.48□□□□□ -0.25
SGIP1-213ENST00000493564 ARHGEF28Q8N1W1 1705 aaKnown RBP13.47□□□□□ -0.25
SGIP1-213ENST00000493564 KIAA1210Q9ULL0 1709 aa13.47□□□□□ -0.25
SGIP1-213ENST00000493564 C8orf37Q96NL8 207 aa13.47□□□□□ -0.25
SGIP1-213ENST00000493564 CABP2Q9NPB3 220 aa13.47□□□□□ -0.25
SGIP1-213ENST00000493564 SRPK2P78362 688 aaKnown RBP13.46□□□□□ -0.25
SGIP1-213ENST00000493564 NGDNQ8NEJ9 315 aaKnown RBP13.46□□□□□ -0.25
SGIP1-213ENST00000493564 PXDNQ92626 1479 aa13.46□□□□□ -0.25
SGIP1-213ENST00000493564 SHPRHQ149N8 1683 aa13.45□□□□□ -0.26
SGIP1-213ENST00000493564 CARD11Q9BXL7 1154 aa13.45□□□□□ -0.26
SGIP1-213ENST00000493564 SPATA31A3Q5VYP0 1347 aa13.44□□□□□ -0.26
SGIP1-213ENST00000493564 USP32Q8NFA0 1604 aa13.44□□□□□ -0.26
SGIP1-213ENST00000493564 PAK3O75914 559 aaPredicted RBP13.44□□□□□ -0.26
SGIP1-213ENST00000493564 CCER1Q8TC90 406 aaPredicted RBP13.44□□□□□ -0.26
SGIP1-213ENST00000493564 CABLES1Q8TDN4 633 aa13.44□□□□□ -0.26
SGIP1-213ENST00000493564 NGLY1Q96IV0 654 aa13.44□□□□□ -0.26
SGIP1-213ENST00000493564 TRPM1Q7Z4N2 1603 aa13.43□□□□□ -0.26
SGIP1-213ENST00000493564 ADGRB2O60241 1585 aa13.43□□□□□ -0.26
SGIP1-213ENST00000493564 ANKARQ7Z5J8 1434 aa13.43□□□□□ -0.26
SGIP1-213ENST00000493564 AFF2P51816 1311 aa13.42□□□□□ -0.26
SGIP1-213ENST00000493564 CCDC61Q9Y6R9 512 aa13.42□□□□□ -0.26
SGIP1-213ENST00000493564 TULP4Q9NRJ4 1543 aa13.42□□□□□ -0.26
SGIP1-213ENST00000493564 EIF3AQ14152 1382 aaKnown RBP13.42□□□□□ -0.26
SGIP1-213ENST00000493564 SOCS7O14512 581 aa13.41□□□□□ -0.26
SGIP1-213ENST00000493564 ZNF772Q68DY9 489 aaPredicted RBP13.41□□□□□ -0.26
SGIP1-213ENST00000493564 GPRASP1Q5JY77 1395 aa13.41□□□□□ -0.26
SGIP1-213ENST00000493564 KIF1AQ12756 1690 aa13.4□□□□□ -0.26
SGIP1-213ENST00000493564 HAP1P54257 671 aaPredicted RBP13.4□□□□□ -0.26
SGIP1-213ENST00000493564 QTRT2Q9H974 415 aaKnown RBP13.4□□□□□ -0.26
SGIP1-213ENST00000493564 CABP1Q9NZU7 370 aa13.4□□□□□ -0.26
SGIP1-213ENST00000493564 ACEP12821 1306 aa13.39□□□□□ -0.27
SGIP1-213ENST00000493564 NUTM2GQ5VZR2 741 aa13.39□□□□□ -0.27
SGIP1-213ENST00000493564 ATP7BP35670 1465 aa13.39□□□□□ -0.27
SGIP1-213ENST00000493564 EVC2Q86UK5 1308 aa13.39□□□□□ -0.27
SGIP1-213ENST00000493564 SBNO1A3KN83 1393 aa13.38□□□□□ -0.27
SGIP1-213ENST00000493564 PLEKHG3A1L390 1219 aa13.38□□□□□ -0.27
SGIP1-213ENST00000493564 USP21Q9UK80 565 aa13.38□□□□□ -0.27
SGIP1-213ENST00000493564 TNS3Q68CZ2 1445 aa13.38□□□□□ -0.27
SGIP1-213ENST00000493564 QRICH2Q9H0J4 1663 aa13.37□□□□□ -0.27
SGIP1-213ENST00000493564 ST20-MTHFSA0A0A6YYL1 179 aa13.36□□□□□ -0.27
SGIP1-213ENST00000493564 RXRBP28702 533 aa13.36□□□□□ -0.27
SGIP1-213ENST00000493564 PPIP5K1Q6PFW1 1433 aa13.36□□□□□ -0.27
SGIP1-213ENST00000493564 CLSPNQ9HAW4 1339 aa13.36□□□□□ -0.27
SGIP1-213ENST00000493564 RALGAPBQ86X10 1494 aa13.36□□□□□ -0.27
SGIP1-213ENST00000493564 FNBP4Q8N3X1 1017 aaPredicted RBP13.35□□□□□ -0.27
SGIP1-213ENST00000493564 ARHGEF10O15013 1369 aa13.34□□□□□ -0.27
SGIP1-213ENST00000493564 COL22A1Q8NFW1 1626 aaPredicted RBP13.34□□□□□ -0.27
SGIP1-213ENST00000493564 POLR3AO14802 1390 aaPredicted RBP13.33□□□□□ -0.27
SGIP1-213ENST00000493564 FAM83GA6ND36 823 aa13.33□□□□□ -0.28
SGIP1-213ENST00000493564 ABTB2Q8N961 1025 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms