RNA–Protein interactions for RNA: ENST00000493426.1

EWSR1-220, Transcript of EWS RNA binding protein 1, humanhuman

TSL 3

Gene EWSR1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-220ENST00000493426 WDR43Q15061 677 aaKnown RBP eCLIP8.53□□□□□ -1.04
EWSR1-220ENST00000493426 AMER1Q5JTC6 1135 aaPredicted RBP8.53□□□□□ -1.04
EWSR1-220ENST00000493426 RSPH4AQ5TD94 716 aa8.53□□□□□ -1.04
EWSR1-220ENST00000493426 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.53□□□□□ -1.04
EWSR1-220ENST00000493426 ZSCAN30Q86W11 494 aa8.53□□□□□ -1.04
EWSR1-220ENST00000493426 TRIM44Q96DX7 344 aaPredicted RBP8.53□□□□□ -1.04
EWSR1-220ENST00000493426 SLKQ9H2G2 1235 aaPredicted RBP8.53□□□□□ -1.04
EWSR1-220ENST00000493426 PODXL2Q9NZ53 605 aa8.53□□□□□ -1.04
EWSR1-220ENST00000493426 ERBB4Q15303 1308 aa8.53□□□□□ -1.04
EWSR1-220ENST00000493426 CROCC2H7BZ55 1655 aa8.53□□□□□ -1.04
EWSR1-220ENST00000493426 ZNF500O60304 480 aaPredicted RBP8.52□□□□□ -1.05
EWSR1-220ENST00000493426 SLC24A1O60721 1099 aa8.52□□□□□ -1.05
EWSR1-220ENST00000493426 MCM5P33992 734 aa8.52□□□□□ -1.05
EWSR1-220ENST00000493426 CDCA8Q53HL2 280 aa8.52□□□□□ -1.05
EWSR1-220ENST00000493426 ZNF326Q5BKZ1 582 aaKnown RBP8.52□□□□□ -1.05
EWSR1-220ENST00000493426 UTP14CQ5TAP6 766 aaKnown RBP8.52□□□□□ -1.05
EWSR1-220ENST00000493426 CFDP1Q9UEE9 299 aaPredicted RBP8.52□□□□□ -1.05
EWSR1-220ENST00000493426 ABCA8O94911 1581 aa8.52□□□□□ -1.05
EWSR1-220ENST00000493426 ERCC6L2Q5T890 1561 aa8.52□□□□□ -1.05
EWSR1-220ENST00000493426 CCDC141Q6ZP82 1450 aa8.51□□□□□ -1.05
EWSR1-220ENST00000493426 WDR7Q9Y4E6 1490 aa8.51□□□□□ -1.05
EWSR1-220ENST00000493426 RBM25P49756 843 aaKnown RBP8.51□□□□□ -1.05
EWSR1-220ENST00000493426 RIPK4P57078 832 aa8.51□□□□□ -1.05
EWSR1-220ENST00000493426 RWDD1Q9H446 243 aaPredicted RBP8.51□□□□□ -1.05
EWSR1-220ENST00000493426 EIF2AK4Q9P2K8 1649 aaKnown RBP8.51□□□□□ -1.05
EWSR1-220ENST00000493426 DISP3Q9P2K9 1392 aa8.5□□□□□ -1.05
EWSR1-220ENST00000493426 SENP3-EIF4A1A0A087X0R7 540 aa8.5□□□□□ -1.05
EWSR1-220ENST00000493426 PLEKHD1A6NEE1 506 aa8.5□□□□□ -1.05
EWSR1-220ENST00000493426 SPDYE4A6NLX3 237 aa8.5□□□□□ -1.05
EWSR1-220ENST00000493426 CNGB1Q14028 1251 aaPredicted RBP8.5□□□□□ -1.05
EWSR1-220ENST00000493426 CC2D1BQ5T0F9 858 aaKnown RBP8.5□□□□□ -1.05
EWSR1-220ENST00000493426 KIAA1211Q6ZU35 1233 aa8.5□□□□□ -1.05
EWSR1-220ENST00000493426 AKT1S1Q96B36 256 aa8.5□□□□□ -1.05
EWSR1-220ENST00000493426 GBP4Q96PP9 640 aa8.5□□□□□ -1.05
EWSR1-220ENST00000493426 PDZRN3Q9UPQ7 1066 aa8.5□□□□□ -1.05
EWSR1-220ENST00000493426 DYNC1I1O14576 645 aa8.49□□□□□ -1.05
EWSR1-220ENST00000493426 CT47B1P0C2W7 299 aaPredicted RBP8.49□□□□□ -1.05
EWSR1-220ENST00000493426 RAB3GAP1Q15042 981 aa8.49□□□□□ -1.05
EWSR1-220ENST00000493426 C22orf23Q9BZE7 217 aa8.49□□□□□ -1.05
EWSR1-220ENST00000493426 ASXL1Q8IXJ9 1541 aa8.49□□□□□ -1.05
EWSR1-220ENST00000493426 PRG4Q92954 1404 aaPredicted RBP8.48□□□□□ -1.05
EWSR1-220ENST00000493426 BCAR3O75815 825 aa8.48□□□□□ -1.05
EWSR1-220ENST00000493426 ZNF445P59923 1031 aa8.48□□□□□ -1.05
EWSR1-220ENST00000493426 HDAC1Q13547 482 aaPredicted RBP8.48□□□□□ -1.05
EWSR1-220ENST00000493426 CSPP1Q1MSJ5 1256 aa8.48□□□□□ -1.05
EWSR1-220ENST00000493426 CCDC27Q2M243 656 aa8.48□□□□□ -1.05
EWSR1-220ENST00000493426 GAS2L3Q86XJ1 694 aa8.48□□□□□ -1.05
EWSR1-220ENST00000493426 WDR63Q8IWG1 891 aa8.48□□□□□ -1.05
EWSR1-220ENST00000493426 NOL7Q9UMY1 257 aaKnown RBP8.48□□□□□ -1.05
EWSR1-220ENST00000493426 KNSTRNQ9Y448 316 aa8.48□□□□□ -1.05
EWSR1-220ENST00000493426 MAGI2Q86UL8 1455 aa8.48□□□□□ -1.05
EWSR1-220ENST00000493426 ARHGEF5Q12774 1597 aa8.48□□□□□ -1.05
EWSR1-220ENST00000493426 A2MP01023 1474 aa8.47□□□□□ -1.05
EWSR1-220ENST00000493426 NCLP19338 710 aaKnown RBP8.47□□□□□ -1.05
EWSR1-220ENST00000493426 NBPF1Q3BBV0 1214 aa8.47□□□□□ -1.05
EWSR1-220ENST00000493426 HSCBQ8IWL3 235 aa8.47□□□□□ -1.05
EWSR1-220ENST00000493426 PDLIM2Q96JY6 352 aa8.47□□□□□ -1.05
EWSR1-220ENST00000493426 KDM2AQ9Y2K7 1162 aa8.47□□□□□ -1.05
EWSR1-220ENST00000493426 PCDHB15Q9Y5E8 787 aa8.47□□□□□ -1.05
EWSR1-220ENST00000493426 POLR3AO14802 1390 aaPredicted RBP8.47□□□□□ -1.05
EWSR1-220ENST00000493426 C9orf84Q5VXU9 1444 aa8.46□□□□□ -1.05
EWSR1-220ENST00000493426 ATP10BO94823 1461 aa8.46□□□□□ -1.05
EWSR1-220ENST00000493426 PLA2R1Q13018 1463 aa8.46□□□□□ -1.05
EWSR1-220ENST00000493426 PLB1Q6P1J6 1458 aa8.46□□□□□ -1.05
EWSR1-220ENST00000493426 RARSP54136 660 aaKnown RBP8.46□□□□□ -1.06
EWSR1-220ENST00000493426 KLHL40Q2TBA0 621 aa8.46□□□□□ -1.06
EWSR1-220ENST00000493426 SYNMO15061 1565 aa8.46□□□□□ -1.06
EWSR1-220ENST00000493426 APAF1O14727 1248 aa8.45□□□□□ -1.06
EWSR1-220ENST00000493426 ANP32BQ92688 251 aaKnown RBP8.45□□□□□ -1.06
EWSR1-220ENST00000493426 TNPO1Q92973 898 aaKnown RBP8.45□□□□□ -1.06
EWSR1-220ENST00000493426 GZF1Q9H116 711 aaPredicted RBP8.45□□□□□ -1.06
EWSR1-220ENST00000493426 KIF16BQ96L93 1317 aa8.45□□□□□ -1.06
EWSR1-220ENST00000493426 HSP90AB1P08238 724 aaKnown RBP8.44□□□□□ -1.06
EWSR1-220ENST00000493426 TSPY4P0CV99 314 aa8.44□□□□□ -1.06
EWSR1-220ENST00000493426 TSPY10P0CW01 314 aa8.44□□□□□ -1.06
EWSR1-220ENST00000493426 RBM10P98175 930 aaKnown RBP8.44□□□□□ -1.06
EWSR1-220ENST00000493426 WWC1Q8IX03 1113 aa8.44□□□□□ -1.06
EWSR1-220ENST00000493426 KLHL34Q8N239 644 aa8.44□□□□□ -1.06
EWSR1-220ENST00000493426 SSUH2Q9Y2M2 353 aa8.44□□□□□ -1.06
EWSR1-220ENST00000493426 COG6Q9Y2V7 657 aa8.44□□□□□ -1.06
EWSR1-220ENST00000493426 FAM135AQ9P2D6 1515 aa8.44□□□□□ -1.06
EWSR1-220ENST00000493426 RNF17Q9BXT8 1623 aaKnown RBP8.43□□□□□ -1.06
EWSR1-220ENST00000493426 MSNP26038 577 aaKnown RBP8.43□□□□□ -1.06
EWSR1-220ENST00000493426 NASPP49321 788 aaPredicted RBP8.43□□□□□ -1.06
EWSR1-220ENST00000493426 GTPBP4Q9BZE4 634 aaKnown RBP8.43□□□□□ -1.06
EWSR1-220ENST00000493426 GOLGA6L22H0YM25 854 aa8.42□□□□□ -1.06
EWSR1-220ENST00000493426 DMTNQ08495 405 aa8.42□□□□□ -1.06
EWSR1-220ENST00000493426 PANK1Q8TE04 598 aa8.42□□□□□ -1.06
EWSR1-220ENST00000493426 YEATS2Q9ULM3 1422 aa8.42□□□□□ -1.06
EWSR1-220ENST00000493426 CDC42BPAQ5VT25 1732 aa8.41□□□□□ -1.06
EWSR1-220ENST00000493426 UNC13BO14795 1591 aa8.41□□□□□ -1.06
EWSR1-220ENST00000493426 KIF20AO95235 890 aa8.41□□□□□ -1.06
EWSR1-220ENST00000493426 MVPQ14764 893 aaKnown RBP8.41□□□□□ -1.06
EWSR1-220ENST00000493426 SASS6Q6UVJ0 657 aa8.41□□□□□ -1.06
EWSR1-220ENST00000493426 CFAP44Q96MT7 982 aa8.41□□□□□ -1.06
EWSR1-220ENST00000493426 CCDC94Q9BW85 323 aaPredicted RBP8.41□□□□□ -1.06
EWSR1-220ENST00000493426 ZKSCAN5Q9Y2L8 839 aa8.41□□□□□ -1.06
EWSR1-220ENST00000493426 KIF13AQ9H1H9 1805 aa8.4□□□□□ -1.06
EWSR1-220ENST00000493426 MAST1Q9Y2H9 1570 aa8.4□□□□□ -1.06
EWSR1-220ENST00000493426 UHRF1BP1LA0JNW5 1464 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms