RNA–Protein interactions for RNA: ENST00000493358.1

SNED1-212, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 578 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-212ENST00000493358 FMN2Q9NZ56 1722 aa19.73■□□□□ 0.75
SNED1-212ENST00000493358 DDX17Q92841 729 aaKnown RBP19.71■□□□□ 0.75
SNED1-212ENST00000493358 PNPLA6Q8IY17 1366 aa19.7■□□□□ 0.74
SNED1-212ENST00000493358 YTHDC2Q9H6S0 1430 aaKnown RBP19.7■□□□□ 0.74
SNED1-212ENST00000493358 KIF1AQ12756 1690 aa19.7■□□□□ 0.74
SNED1-212ENST00000493358 ABCC11Q96J66 1382 aa19.7■□□□□ 0.74
SNED1-212ENST00000493358 ORAI2Q96SN7 254 aa19.69■□□□□ 0.74
SNED1-212ENST00000493358 RGPD8O14715 1765 aaPredicted RBP19.69■□□□□ 0.74
SNED1-212ENST00000493358 NRXN1Q9ULB1 1477 aa19.68■□□□□ 0.74
SNED1-212ENST00000493358 TMEM132EQ6IEE7 984 aa19.68■□□□□ 0.74
SNED1-212ENST00000493358 MARF1Q9Y4F3 1742 aaKnown RBP19.68■□□□□ 0.74
SNED1-212ENST00000493358 COL22A1Q8NFW1 1626 aaPredicted RBP19.67■□□□□ 0.74
SNED1-212ENST00000493358 NPHP3Q7Z494 1330 aa19.67■□□□□ 0.74
SNED1-212ENST00000493358 DHX57Q6P158 1386 aaKnown RBP19.67■□□□□ 0.74
SNED1-212ENST00000493358 ESCO1Q5FWF5 840 aa19.66■□□□□ 0.74
SNED1-212ENST00000493358 SOS2Q07890 1332 aaPredicted RBP19.66■□□□□ 0.74
SNED1-212ENST00000493358 WAPLQ7Z5K2 1190 aa19.65■□□□□ 0.74
SNED1-212ENST00000493358 AFF2P51816 1311 aa19.65■□□□□ 0.74
SNED1-212ENST00000493358 C8orf37Q96NL8 207 aa19.64■□□□□ 0.73
SNED1-212ENST00000493358 C14orf93Q9H972 538 aaKnown RBP19.64■□□□□ 0.73
SNED1-212ENST00000493358 PLEKHH1Q9ULM0 1364 aa19.62■□□□□ 0.73
SNED1-212ENST00000493358 RXRBP28702 533 aa19.62■□□□□ 0.73
SNED1-212ENST00000493358 NUTM2FA1L443 756 aa19.61■□□□□ 0.73
SNED1-212ENST00000493358 HRCP23327 699 aa19.61■□□□□ 0.73
SNED1-212ENST00000493358 CFAP70Q5T0N1 1121 aa19.61■□□□□ 0.73
SNED1-212ENST00000493358 DLC1Q96QB1 1528 aa19.61■□□□□ 0.73
SNED1-212ENST00000493358 PXDNQ92626 1479 aa19.6■□□□□ 0.73
SNED1-212ENST00000493358 ADAMTS2O95450 1211 aa19.6■□□□□ 0.73
SNED1-212ENST00000493358 SIRT1Q96EB6 747 aa19.6■□□□□ 0.73
SNED1-212ENST00000493358 CDK12Q9NYV4 1490 aaPredicted RBP19.6■□□□□ 0.73
SNED1-212ENST00000493358 NGLY1Q96IV0 654 aa19.59■□□□□ 0.73
SNED1-212ENST00000493358 FOXO3O43524 673 aa19.58■□□□□ 0.72
SNED1-212ENST00000493358 POGKQ9P215 609 aa19.57■□□□□ 0.72
SNED1-212ENST00000493358 ADGRB2O60241 1585 aa19.57■□□□□ 0.72
SNED1-212ENST00000493358 KDM2AQ9Y2K7 1162 aa19.56■□□□□ 0.72
SNED1-212ENST00000493358 ADGRB1O14514 1584 aa19.56■□□□□ 0.72
SNED1-212ENST00000493358 XPCQ01831 940 aaPredicted RBP19.55■□□□□ 0.72
SNED1-212ENST00000493358 SAFB2Q14151 953 aaKnown RBP eCLIP19.55■□□□□ 0.72
SNED1-212ENST00000493358 DCAF11Q8TEB1 546 aa19.55■□□□□ 0.72
SNED1-212ENST00000493358 STAC3Q96MF2 364 aa19.55■□□□□ 0.72
SNED1-212ENST00000493358 PRAM1Q96QH2 718 aa19.55■□□□□ 0.72
SNED1-212ENST00000493358 ARHGEF28Q8N1W1 1705 aaKnown RBP19.54■□□□□ 0.72
SNED1-212ENST00000493358 QTRT2Q9H974 415 aaKnown RBP19.54■□□□□ 0.72
SNED1-212ENST00000493358 ITSN1Q15811 1721 aa19.54■□□□□ 0.72
SNED1-212ENST00000493358 RBM6P78332 1123 aaKnown RBP19.53■□□□□ 0.72
SNED1-212ENST00000493358 KIAA1210Q9ULL0 1709 aa19.52■□□□□ 0.72
SNED1-212ENST00000493358 USP21Q9UK80 565 aa19.52■□□□□ 0.72
SNED1-212ENST00000493358 EIF3AQ14152 1382 aaKnown RBP19.52■□□□□ 0.72
SNED1-212ENST00000493358 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.51■□□□□ 0.71
SNED1-212ENST00000493358 USP32Q8NFA0 1604 aa19.51■□□□□ 0.71
SNED1-212ENST00000493358 PSME1Q06323 249 aa19.5■□□□□ 0.71
SNED1-212ENST00000493358 PHF8Q9UPP1 1060 aa19.5■□□□□ 0.71
SNED1-212ENST00000493358 TRAK1Q9UPV9 953 aa19.5■□□□□ 0.71
SNED1-212ENST00000493358 ANKARQ7Z5J8 1434 aa19.5■□□□□ 0.71
SNED1-212ENST00000493358 ABCA3Q99758 1704 aa19.49■□□□□ 0.71
SNED1-212ENST00000493358 TRPC5Q9UL62 973 aaPredicted RBP19.49■□□□□ 0.71
SNED1-212ENST00000493358 RGS12O14924 1447 aa19.49■□□□□ 0.71
SNED1-212ENST00000493358 KRT28Q7Z3Y7 464 aa19.48■□□□□ 0.71
SNED1-212ENST00000493358 TNS3Q68CZ2 1445 aa19.48■□□□□ 0.71
SNED1-212ENST00000493358 SPATA31A3Q5VYP0 1347 aa19.48■□□□□ 0.71
SNED1-212ENST00000493358 HAP1P54257 671 aaPredicted RBP19.47■□□□□ 0.71
SNED1-212ENST00000493358 TULP4Q9NRJ4 1543 aa19.46■□□□□ 0.71
SNED1-212ENST00000493358 FNBP4Q8N3X1 1017 aaPredicted RBP19.45■□□□□ 0.7
SNED1-212ENST00000493358 PLCH1Q4KWH8 1693 aa19.45■□□□□ 0.7
SNED1-212ENST00000493358 MINK1Q8N4C8 1332 aaPredicted RBP19.45■□□□□ 0.7
SNED1-212ENST00000493358 UPF1Q92900 1129 aaKnown RBP eCLIP19.44■□□□□ 0.7
SNED1-212ENST00000493358 HIRIP3Q9BW71 556 aaPredicted RBP19.44■□□□□ 0.7
SNED1-212ENST00000493358 TRPM3Q9HCF6 1732 aaPredicted RBP19.44■□□□□ 0.7
SNED1-212ENST00000493358 NWD2Q9ULI1 1742 aa19.44■□□□□ 0.7
SNED1-212ENST00000493358 SBNO1A3KN83 1393 aa19.44■□□□□ 0.7
SNED1-212ENST00000493358 ARHGEF10O15013 1369 aa19.44■□□□□ 0.7
SNED1-212ENST00000493358 ATRNO75882 1429 aa19.43■□□□□ 0.7
SNED1-212ENST00000493358 LMOD2Q6P5Q4 547 aa19.43■□□□□ 0.7
SNED1-212ENST00000493358 ALS2Q96Q42 1657 aa19.41■□□□□ 0.7
SNED1-212ENST00000493358 PMFBP1Q8TBY8 1022 aa19.41■□□□□ 0.7
SNED1-212ENST00000493358 GPRASP1Q5JY77 1395 aa19.41■□□□□ 0.7
SNED1-212ENST00000493358 ATAD2Q6PL18 1390 aa19.4■□□□□ 0.7
SNED1-212ENST00000493358 WASLO00401 505 aaPredicted RBP19.39■□□□□ 0.69
SNED1-212ENST00000493358 BCL9LQ86UU0 1499 aa19.39■□□□□ 0.69
SNED1-212ENST00000493358 PLEKHG5O94827 1062 aa19.38■□□□□ 0.69
SNED1-212ENST00000493358 TOPAZ1Q8N9V7 1692 aa19.36■□□□□ 0.69
SNED1-212ENST00000493358 SLIT2O94813 1529 aa19.36■□□□□ 0.69
SNED1-212ENST00000493358 NGDNQ8NEJ9 315 aaKnown RBP19.36■□□□□ 0.69
SNED1-212ENST00000493358 BRWD3Q6RI45 1802 aa19.35■□□□□ 0.69
SNED1-212ENST00000493358 UNC5CLQ8IV45 518 aa19.35■□□□□ 0.69
SNED1-212ENST00000493358 QRICH2Q9H0J4 1663 aa19.35■□□□□ 0.69
SNED1-212ENST00000493358 ATP7BP35670 1465 aa19.35■□□□□ 0.69
SNED1-212ENST00000493358 PRR36Q9H6K5 1346 aa19.34■□□□□ 0.69
SNED1-212ENST00000493358 GJD4Q96KN9 370 aaPredicted RBP19.34■□□□□ 0.69
SNED1-212ENST00000493358 COL14A1Q05707 1796 aaKnown RBP19.34■□□□□ 0.69
SNED1-212ENST00000493358 CRYBG1Q9Y4K1 1723 aa19.34■□□□□ 0.69
SNED1-212ENST00000493358 GLI3P10071 1580 aa19.33■□□□□ 0.69
SNED1-212ENST00000493358 CABLES1Q8TDN4 633 aa19.33■□□□□ 0.68
SNED1-212ENST00000493358 RALGAPBQ86X10 1494 aa19.32■□□□□ 0.68
SNED1-212ENST00000493358 NRAPQ86VF7 1730 aa19.31■□□□□ 0.68
SNED1-212ENST00000493358 PAK3O75914 559 aaPredicted RBP19.31■□□□□ 0.68
SNED1-212ENST00000493358 NUDT16Q96DE0 195 aaKnown RBP19.3■□□□□ 0.68
SNED1-212ENST00000493358 CCDC9Q9Y3X0 531 aaKnown RBP19.3■□□□□ 0.68
SNED1-212ENST00000493358 PHRF1Q9P1Y6 1649 aaKnown RBP19.29■□□□□ 0.68
SNED1-212ENST00000493358 TRPM1Q7Z4N2 1603 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms