RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 NRXN1Q9ULB1 1477 aa19.76■□□□□ 0.75
IRF1-210ENST00000493208 ESCO1Q5FWF5 840 aa19.76■□□□□ 0.75
IRF1-210ENST00000493208 TMEM132EQ6IEE7 984 aa19.76■□□□□ 0.75
IRF1-210ENST00000493208 DCAF11Q8TEB1 546 aa19.75■□□□□ 0.75
IRF1-210ENST00000493208 POGKQ9P215 609 aa19.75■□□□□ 0.75
IRF1-210ENST00000493208 KNDC1Q76NI1 1749 aa19.74■□□□□ 0.75
IRF1-210ENST00000493208 NHSL1Q5SYE7 1610 aa19.74■□□□□ 0.75
IRF1-210ENST00000493208 CFAP70Q5T0N1 1121 aa19.73■□□□□ 0.75
IRF1-210ENST00000493208 NUTM2BA6NNL0 878 aaPredicted RBP19.72■□□□□ 0.75
IRF1-210ENST00000493208 NUTM2EB1AL46 878 aaPredicted RBP19.72■□□□□ 0.75
IRF1-210ENST00000493208 NUTM2AQ8IVF1 878 aaPredicted RBP19.72■□□□□ 0.75
IRF1-210ENST00000493208 EIF3AQ14152 1382 aaKnown RBP19.71■□□□□ 0.75
IRF1-210ENST00000493208 WAPLQ7Z5K2 1190 aa19.71■□□□□ 0.75
IRF1-210ENST00000493208 KDM2AQ9Y2K7 1162 aa19.71■□□□□ 0.75
IRF1-210ENST00000493208 ORAI2Q96SN7 254 aa19.7■□□□□ 0.74
IRF1-210ENST00000493208 SOS2Q07890 1332 aaPredicted RBP19.7■□□□□ 0.74
IRF1-210ENST00000493208 RGS17Q9UGC6 210 aaPredicted RBP19.69■□□□□ 0.74
IRF1-210ENST00000493208 DLC1Q96QB1 1528 aa19.67■□□□□ 0.74
IRF1-210ENST00000493208 PRAM1Q96QH2 718 aa19.67■□□□□ 0.74
IRF1-210ENST00000493208 PNPLA6Q8IY17 1366 aa19.67■□□□□ 0.74
IRF1-210ENST00000493208 PSME1Q06323 249 aa19.66■□□□□ 0.74
IRF1-210ENST00000493208 POTEAQ6S8J7 498 aa19.64■□□□□ 0.73
IRF1-210ENST00000493208 DDX17Q92841 729 aaKnown RBP19.64■□□□□ 0.73
IRF1-210ENST00000493208 LRP6O75581 1613 aa19.64■□□□□ 0.73
IRF1-210ENST00000493208 PLEKHH1Q9ULM0 1364 aa19.63■□□□□ 0.73
IRF1-210ENST00000493208 NUTM2FA1L443 756 aa19.63■□□□□ 0.73
IRF1-210ENST00000493208 FOXO3O43524 673 aa19.63■□□□□ 0.73
IRF1-210ENST00000493208 C8orf37Q96NL8 207 aa19.63■□□□□ 0.73
IRF1-210ENST00000493208 TRAK1Q9UPV9 953 aa19.63■□□□□ 0.73
IRF1-210ENST00000493208 KIF1AQ12756 1690 aa19.62■□□□□ 0.73
IRF1-210ENST00000493208 RXRBP28702 533 aa19.62■□□□□ 0.73
IRF1-210ENST00000493208 NGLY1Q96IV0 654 aa19.62■□□□□ 0.73
IRF1-210ENST00000493208 ANKARQ7Z5J8 1434 aa19.61■□□□□ 0.73
IRF1-210ENST00000493208 AFF2P51816 1311 aa19.61■□□□□ 0.73
IRF1-210ENST00000493208 SAFB2Q14151 953 aaKnown RBP eCLIP19.61■□□□□ 0.73
IRF1-210ENST00000493208 PHF8Q9UPP1 1060 aa19.61■□□□□ 0.73
IRF1-210ENST00000493208 ADAMTS2O95450 1211 aa19.59■□□□□ 0.73
IRF1-210ENST00000493208 HAP1P54257 671 aaPredicted RBP19.59■□□□□ 0.73
IRF1-210ENST00000493208 FMN2Q9NZ56 1722 aa19.59■□□□□ 0.73
IRF1-210ENST00000493208 ADGRB1O14514 1584 aa19.57■□□□□ 0.72
IRF1-210ENST00000493208 KRT28Q7Z3Y7 464 aa19.56■□□□□ 0.72
IRF1-210ENST00000493208 GPRASP1Q5JY77 1395 aa19.56■□□□□ 0.72
IRF1-210ENST00000493208 PXDNQ92626 1479 aa19.55■□□□□ 0.72
IRF1-210ENST00000493208 ADGRB2O60241 1585 aa19.55■□□□□ 0.72
IRF1-210ENST00000493208 ARHGEF10O15013 1369 aa19.55■□□□□ 0.72
IRF1-210ENST00000493208 RBM6P78332 1123 aaKnown RBP19.54■□□□□ 0.72
IRF1-210ENST00000493208 CDK12Q9NYV4 1490 aaPredicted RBP19.54■□□□□ 0.72
IRF1-210ENST00000493208 MINK1Q8N4C8 1332 aaPredicted RBP19.53■□□□□ 0.72
IRF1-210ENST00000493208 WASLO00401 505 aaPredicted RBP19.53■□□□□ 0.72
IRF1-210ENST00000493208 XPCQ01831 940 aaPredicted RBP19.53■□□□□ 0.72
IRF1-210ENST00000493208 QTRT2Q9H974 415 aaKnown RBP19.53■□□□□ 0.72
IRF1-210ENST00000493208 USP21Q9UK80 565 aa19.53■□□□□ 0.72
IRF1-210ENST00000493208 TRPC5Q9UL62 973 aaPredicted RBP19.53■□□□□ 0.72
IRF1-210ENST00000493208 COL22A1Q8NFW1 1626 aaPredicted RBP19.53■□□□□ 0.72
IRF1-210ENST00000493208 SPATA31A3Q5VYP0 1347 aa19.52■□□□□ 0.72
IRF1-210ENST00000493208 SBNO1A3KN83 1393 aa19.52■□□□□ 0.72
IRF1-210ENST00000493208 KIAA1210Q9ULL0 1709 aa19.51■□□□□ 0.71
IRF1-210ENST00000493208 LMOD2Q6P5Q4 547 aa19.51■□□□□ 0.71
IRF1-210ENST00000493208 HIRIP3Q9BW71 556 aaPredicted RBP19.51■□□□□ 0.71
IRF1-210ENST00000493208 TNS3Q68CZ2 1445 aa19.51■□□□□ 0.71
IRF1-210ENST00000493208 NGDNQ8NEJ9 315 aaKnown RBP19.5■□□□□ 0.71
IRF1-210ENST00000493208 TULP4Q9NRJ4 1543 aa19.5■□□□□ 0.71
IRF1-210ENST00000493208 FNBP4Q8N3X1 1017 aaPredicted RBP19.49■□□□□ 0.71
IRF1-210ENST00000493208 PMFBP1Q8TBY8 1022 aa19.47■□□□□ 0.71
IRF1-210ENST00000493208 TRIM26Q12899 539 aaPredicted RBP19.46■□□□□ 0.71
IRF1-210ENST00000493208 NEUROD1Q13562 356 aa19.45■□□□□ 0.7
IRF1-210ENST00000493208 CENPJQ9HC77 1338 aaPredicted RBP19.44■□□□□ 0.7
IRF1-210ENST00000493208 L3MBTL2Q969R5 705 aa19.43■□□□□ 0.7
IRF1-210ENST00000493208 NUDT16Q96DE0 195 aaKnown RBP19.42■□□□□ 0.7
IRF1-210ENST00000493208 CCDC61Q9Y6R9 512 aa19.42■□□□□ 0.7
IRF1-210ENST00000493208 ARHGEF28Q8N1W1 1705 aaKnown RBP19.42■□□□□ 0.7
IRF1-210ENST00000493208 PAK3O75914 559 aaPredicted RBP19.41■□□□□ 0.7
IRF1-210ENST00000493208 CDK19Q9BWU1 502 aa19.41■□□□□ 0.7
IRF1-210ENST00000493208 ITSN1Q15811 1721 aa19.41■□□□□ 0.7
IRF1-210ENST00000493208 SRPK2P78362 688 aaKnown RBP19.4■□□□□ 0.7
IRF1-210ENST00000493208 UNC5CLQ8IV45 518 aa19.4■□□□□ 0.7
IRF1-210ENST00000493208 ROCK2O75116 1388 aaKnown RBP19.4■□□□□ 0.7
IRF1-210ENST00000493208 ATRNO75882 1429 aa19.38■□□□□ 0.69
IRF1-210ENST00000493208 NBPF1Q3BBV0 1214 aa19.38■□□□□ 0.69
IRF1-210ENST00000493208 ATAD2Q6PL18 1390 aa19.38■□□□□ 0.69
IRF1-210ENST00000493208 TONSLQ96HA7 1378 aa19.38■□□□□ 0.69
IRF1-210ENST00000493208 RGPD8O14715 1765 aaPredicted RBP19.37■□□□□ 0.69
IRF1-210ENST00000493208 USP32Q8NFA0 1604 aa19.37■□□□□ 0.69
IRF1-210ENST00000493208 PRR36Q9H6K5 1346 aa19.37■□□□□ 0.69
IRF1-210ENST00000493208 GJD4Q96KN9 370 aaPredicted RBP19.37■□□□□ 0.69
IRF1-210ENST00000493208 SIN3AQ96ST3 1273 aa19.37■□□□□ 0.69
IRF1-210ENST00000493208 MARF1Q9Y4F3 1742 aaKnown RBP19.37■□□□□ 0.69
IRF1-210ENST00000493208 ATP7BP35670 1465 aa19.36■□□□□ 0.69
IRF1-210ENST00000493208 EVC2Q86UK5 1308 aa19.36■□□□□ 0.69
IRF1-210ENST00000493208 RGS12O14924 1447 aa19.35■□□□□ 0.69
IRF1-210ENST00000493208 CCDC9Q9Y3X0 531 aaKnown RBP19.35■□□□□ 0.69
IRF1-210ENST00000493208 BRD4O60885 1362 aaPredicted RBP19.34■□□□□ 0.69
IRF1-210ENST00000493208 PLEKHG5O94827 1062 aa19.34■□□□□ 0.69
IRF1-210ENST00000493208 UPF1Q92900 1129 aaKnown RBP eCLIP19.34■□□□□ 0.69
IRF1-210ENST00000493208 BCL9LQ86UU0 1499 aa19.34■□□□□ 0.69
IRF1-210ENST00000493208 PLEKHG3A1L390 1219 aa19.33■□□□□ 0.68
IRF1-210ENST00000493208 CABLES1Q8TDN4 633 aa19.33■□□□□ 0.68
IRF1-210ENST00000493208 SLIT2O94813 1529 aa19.33■□□□□ 0.68
IRF1-210ENST00000493208 POLR3AO14802 1390 aaPredicted RBP19.32■□□□□ 0.68
IRF1-210ENST00000493208 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms