RNA–Protein interactions for RNA: ENST00000493185.2

CLTA-208, Transcript of clathrin light chain A, humanhuman

TSL 3

Gene CLTA, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-208ENST00000493185 NRXN1Q9ULB1 1477 aa30.25■■■□□ 2.43
CLTA-208ENST00000493185 YTHDC2Q9H6S0 1430 aaKnown RBP30.23■■■□□ 2.43
CLTA-208ENST00000493185 NUTM2BA6NNL0 878 aaPredicted RBP30.23■■■□□ 2.43
CLTA-208ENST00000493185 NUTM2EB1AL46 878 aaPredicted RBP30.23■■■□□ 2.43
CLTA-208ENST00000493185 NUTM2AQ8IVF1 878 aaPredicted RBP30.23■■■□□ 2.43
CLTA-208ENST00000493185 ORAI2Q96SN7 254 aa30.23■■■□□ 2.43
CLTA-208ENST00000493185 C14orf93Q9H972 538 aaKnown RBP30.23■■■□□ 2.43
CLTA-208ENST00000493185 WAPLQ7Z5K2 1190 aa30.22■■■□□ 2.43
CLTA-208ENST00000493185 PNPLA6Q8IY17 1366 aa30.18■■■□□ 2.42
CLTA-208ENST00000493185 CFAP70Q5T0N1 1121 aa30.18■■■□□ 2.42
CLTA-208ENST00000493185 ZNF772Q68DY9 489 aaPredicted RBP30.18■■■□□ 2.42
CLTA-208ENST00000493185 DHX57Q6P158 1386 aaKnown RBP30.17■■■□□ 2.42
CLTA-208ENST00000493185 PLEKHH1Q9ULM0 1364 aa30.17■■■□□ 2.42
CLTA-208ENST00000493185 SOS2Q07890 1332 aaPredicted RBP30.16■■■□□ 2.42
CLTA-208ENST00000493185 ESCO1Q5FWF5 840 aa30.15■■■□□ 2.42
CLTA-208ENST00000493185 SIRT1Q96EB6 747 aa30.15■■■□□ 2.42
CLTA-208ENST00000493185 NPHP3Q7Z494 1330 aa30.11■■■□□ 2.41
CLTA-208ENST00000493185 FMN2Q9NZ56 1722 aa30.1■■■□□ 2.41
CLTA-208ENST00000493185 NUTM2FA1L443 756 aa30.09■■■□□ 2.41
CLTA-208ENST00000493185 DCAF11Q8TEB1 546 aa30.08■■■□□ 2.41
CLTA-208ENST00000493185 KDM2AQ9Y2K7 1162 aa30.08■■■□□ 2.41
CLTA-208ENST00000493185 STAC3Q96MF2 364 aa30.07■■■□□ 2.4
CLTA-208ENST00000493185 AFF2P51816 1311 aa30.06■■■□□ 2.4
CLTA-208ENST00000493185 FOXO3O43524 673 aa30.05■■■□□ 2.4
CLTA-208ENST00000493185 C8orf37Q96NL8 207 aa30.05■■■□□ 2.4
CLTA-208ENST00000493185 DLC1Q96QB1 1528 aa30.05■■■□□ 2.4
CLTA-208ENST00000493185 PRAM1Q96QH2 718 aa30.04■■■□□ 2.4
CLTA-208ENST00000493185 PXDNQ92626 1479 aa30.03■■■□□ 2.4
CLTA-208ENST00000493185 ADGRB1O14514 1584 aa30.03■■■□□ 2.4
CLTA-208ENST00000493185 KIF1AQ12756 1690 aa30.02■■■□□ 2.4
CLTA-208ENST00000493185 POGKQ9P215 609 aa30.02■■■□□ 2.4
CLTA-208ENST00000493185 COL22A1Q8NFW1 1626 aaPredicted RBP30.01■■■□□ 2.39
CLTA-208ENST00000493185 ADAMTS2O95450 1211 aa30.01■■■□□ 2.39
CLTA-208ENST00000493185 SAFB2Q14151 953 aaKnown RBP eCLIP30.01■■■□□ 2.39
CLTA-208ENST00000493185 RXRBP28702 533 aa29.99■■■□□ 2.39
CLTA-208ENST00000493185 XPCQ01831 940 aaPredicted RBP29.99■■■□□ 2.39
CLTA-208ENST00000493185 RGPD8O14715 1765 aaPredicted RBP29.98■■■□□ 2.39
CLTA-208ENST00000493185 NGLY1Q96IV0 654 aa29.97■■■□□ 2.39
CLTA-208ENST00000493185 TRAK1Q9UPV9 953 aa29.97■■■□□ 2.39
CLTA-208ENST00000493185 PHF8Q9UPP1 1060 aa29.93■■■□□ 2.38
CLTA-208ENST00000493185 ADGRB2O60241 1585 aa29.93■■■□□ 2.38
CLTA-208ENST00000493185 CDK12Q9NYV4 1490 aaPredicted RBP29.92■■■□□ 2.38
CLTA-208ENST00000493185 QTRT2Q9H974 415 aaKnown RBP29.91■■■□□ 2.38
CLTA-208ENST00000493185 ANKARQ7Z5J8 1434 aa29.89■■■□□ 2.38
CLTA-208ENST00000493185 KRT28Q7Z3Y7 464 aa29.89■■■□□ 2.38
CLTA-208ENST00000493185 SPATA31A3Q5VYP0 1347 aa29.88■■■□□ 2.37
CLTA-208ENST00000493185 RBM6P78332 1123 aaKnown RBP29.87■■■□□ 2.37
CLTA-208ENST00000493185 MINK1Q8N4C8 1332 aaPredicted RBP29.87■■■□□ 2.37
CLTA-208ENST00000493185 MARF1Q9Y4F3 1742 aaKnown RBP29.87■■■□□ 2.37
CLTA-208ENST00000493185 PSME1Q06323 249 aa29.86■■■□□ 2.37
CLTA-208ENST00000493185 HIRIP3Q9BW71 556 aaPredicted RBP29.86■■■□□ 2.37
CLTA-208ENST00000493185 USP21Q9UK80 565 aa29.86■■■□□ 2.37
CLTA-208ENST00000493185 EIF3AQ14152 1382 aaKnown RBP29.86■■■□□ 2.37
CLTA-208ENST00000493185 USP32Q8NFA0 1604 aa29.85■■■□□ 2.37
CLTA-208ENST00000493185 FNBP4Q8N3X1 1017 aaPredicted RBP29.84■■■□□ 2.37
CLTA-208ENST00000493185 ARHGEF28Q8N1W1 1705 aaKnown RBP29.84■■■□□ 2.37
CLTA-208ENST00000493185 KIAA1210Q9ULL0 1709 aa29.82■■■□□ 2.36
CLTA-208ENST00000493185 TNS3Q68CZ2 1445 aa29.82■■■□□ 2.36
CLTA-208ENST00000493185 TRPC5Q9UL62 973 aaPredicted RBP29.81■■■□□ 2.36
CLTA-208ENST00000493185 TULP4Q9NRJ4 1543 aa29.8■■■□□ 2.36
CLTA-208ENST00000493185 SBNO1A3KN83 1393 aa29.79■■■□□ 2.36
CLTA-208ENST00000493185 WASLO00401 505 aaPredicted RBP29.79■■■□□ 2.36
CLTA-208ENST00000493185 PMFBP1Q8TBY8 1022 aa29.79■■■□□ 2.36
CLTA-208ENST00000493185 RGS12O14924 1447 aa29.78■■■□□ 2.36
CLTA-208ENST00000493185 ATRNO75882 1429 aa29.75■■■□□ 2.35
CLTA-208ENST00000493185 HAP1P54257 671 aaPredicted RBP29.75■■■□□ 2.35
CLTA-208ENST00000493185 ARHGEF10O15013 1369 aa29.75■■■□□ 2.35
CLTA-208ENST00000493185 PRR36Q9H6K5 1346 aa29.74■■■□□ 2.35
CLTA-208ENST00000493185 LMOD2Q6P5Q4 547 aa29.74■■■□□ 2.35
CLTA-208ENST00000493185 UPF1Q92900 1129 aaKnown RBP eCLIP29.74■■■□□ 2.35
CLTA-208ENST00000493185 GPRASP1Q5JY77 1395 aa29.73■■■□□ 2.35
CLTA-208ENST00000493185 BCL9LQ86UU0 1499 aa29.72■■■□□ 2.35
CLTA-208ENST00000493185 ITSN1Q15811 1721 aa29.71■■■□□ 2.35
CLTA-208ENST00000493185 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.69■■■□□ 2.34
CLTA-208ENST00000493185 TRPM3Q9HCF6 1732 aaPredicted RBP29.69■■■□□ 2.34
CLTA-208ENST00000493185 PLEKHG5O94827 1062 aa29.68■■■□□ 2.34
CLTA-208ENST00000493185 NBPF1Q3BBV0 1214 aa29.68■■■□□ 2.34
CLTA-208ENST00000493185 NGDNQ8NEJ9 315 aaKnown RBP29.68■■■□□ 2.34
CLTA-208ENST00000493185 CABLES1Q8TDN4 633 aa29.68■■■□□ 2.34
CLTA-208ENST00000493185 ABCA3Q99758 1704 aa29.68■■■□□ 2.34
CLTA-208ENST00000493185 ATP7BP35670 1465 aa29.66■■■□□ 2.34
CLTA-208ENST00000493185 SLIT2O94813 1529 aa29.66■■■□□ 2.34
CLTA-208ENST00000493185 UNC5CLQ8IV45 518 aa29.65■■■□□ 2.34
CLTA-208ENST00000493185 L3MBTL2Q969R5 705 aa29.65■■■□□ 2.34
CLTA-208ENST00000493185 NUDT16Q96DE0 195 aaKnown RBP29.65■■■□□ 2.34
CLTA-208ENST00000493185 CDK19Q9BWU1 502 aa29.64■■■□□ 2.34
CLTA-208ENST00000493185 ALS2Q96Q42 1657 aa29.63■■■□□ 2.33
CLTA-208ENST00000493185 SIN3AQ96ST3 1273 aa29.63■■■□□ 2.33
CLTA-208ENST00000493185 GJD4Q96KN9 370 aaPredicted RBP29.62■■■□□ 2.33
CLTA-208ENST00000493185 NEUROD1Q13562 356 aa29.6■■■□□ 2.33
CLTA-208ENST00000493185 ATAD2Q6PL18 1390 aa29.6■■■□□ 2.33
CLTA-208ENST00000493185 PLCH1Q4KWH8 1693 aa29.6■■■□□ 2.33
CLTA-208ENST00000493185 NWD2Q9ULI1 1742 aa29.59■■■□□ 2.33
CLTA-208ENST00000493185 PAK3O75914 559 aaPredicted RBP29.59■■■□□ 2.33
CLTA-208ENST00000493185 CENPJQ9HC77 1338 aaPredicted RBP29.58■■■□□ 2.33
CLTA-208ENST00000493185 TOPAZ1Q8N9V7 1692 aa29.57■■■□□ 2.32
CLTA-208ENST00000493185 CCDC61Q9Y6R9 512 aa29.56■■■□□ 2.32
CLTA-208ENST00000493185 RALGAPBQ86X10 1494 aa29.55■■■□□ 2.32
CLTA-208ENST00000493185 QRICH2Q9H0J4 1663 aa29.54■■■□□ 2.32
CLTA-208ENST00000493185 TRPM1Q7Z4N2 1603 aa29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms