RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 YTHDC2Q9H6S0 1430 aaKnown RBP19.17■□□□□ 0.66
MSH6-208ENST00000493177 NRXN1Q9ULB1 1477 aa19.16■□□□□ 0.66
MSH6-208ENST00000493177 CFAP70Q5T0N1 1121 aa19.16■□□□□ 0.66
MSH6-208ENST00000493177 SHPRHQ149N8 1683 aa19.15■□□□□ 0.66
MSH6-208ENST00000493177 C14orf93Q9H972 538 aaKnown RBP19.15■□□□□ 0.66
MSH6-208ENST00000493177 TECPR2O15040 1411 aa19.15■□□□□ 0.66
MSH6-208ENST00000493177 C1orf167Q5SNV9 1468 aa19.15■□□□□ 0.66
MSH6-208ENST00000493177 CDC42BPGQ6DT37 1551 aa19.15■□□□□ 0.66
MSH6-208ENST00000493177 WAPLQ7Z5K2 1190 aa19.14■□□□□ 0.65
MSH6-208ENST00000493177 ABCC11Q96J66 1382 aa19.14■□□□□ 0.65
MSH6-208ENST00000493177 MEX3CQ5U5Q3 659 aaKnown RBP19.13■□□□□ 0.65
MSH6-208ENST00000493177 STAC3Q96MF2 364 aa19.12■□□□□ 0.65
MSH6-208ENST00000493177 PLEKHH1Q9ULM0 1364 aa19.1■□□□□ 0.65
MSH6-208ENST00000493177 NUTM2FA1L443 756 aa19.1■□□□□ 0.65
MSH6-208ENST00000493177 POGKQ9P215 609 aa19.1■□□□□ 0.65
MSH6-208ENST00000493177 FMN2Q9NZ56 1722 aa19.09■□□□□ 0.65
MSH6-208ENST00000493177 SPATA31A6Q5VVP1 1343 aa19.09■□□□□ 0.65
MSH6-208ENST00000493177 SAFB2Q14151 953 aaKnown RBP eCLIP19.09■□□□□ 0.65
MSH6-208ENST00000493177 DDX17Q92841 729 aaKnown RBP19.09■□□□□ 0.65
MSH6-208ENST00000493177 NBPF8Q3BBV2 869 aa19.08■□□□□ 0.64
MSH6-208ENST00000493177 ESCO1Q5FWF5 840 aa19.08■□□□□ 0.64
MSH6-208ENST00000493177 LRRC59Q96AG4 307 aaKnown RBP19.08■□□□□ 0.64
MSH6-208ENST00000493177 ORAI2Q96SN7 254 aa19.08■□□□□ 0.64
MSH6-208ENST00000493177 NUTM2BA6NNL0 878 aaPredicted RBP19.07■□□□□ 0.64
MSH6-208ENST00000493177 NUTM2EB1AL46 878 aaPredicted RBP19.07■□□□□ 0.64
MSH6-208ENST00000493177 NUTM2AQ8IVF1 878 aaPredicted RBP19.07■□□□□ 0.64
MSH6-208ENST00000493177 SOCS7O14512 581 aa19.06■□□□□ 0.64
MSH6-208ENST00000493177 PRAM1Q96QH2 718 aa19.06■□□□□ 0.64
MSH6-208ENST00000493177 TRAK1Q9UPV9 953 aa19.06■□□□□ 0.64
MSH6-208ENST00000493177 DLC1Q96QB1 1528 aa19.05■□□□□ 0.64
MSH6-208ENST00000493177 SIRT1Q96EB6 747 aa19.05■□□□□ 0.64
MSH6-208ENST00000493177 RGPD8O14715 1765 aaPredicted RBP19.05■□□□□ 0.64
MSH6-208ENST00000493177 ADGRB1O14514 1584 aa19.04■□□□□ 0.64
MSH6-208ENST00000493177 KIF1AQ12756 1690 aa19.03■□□□□ 0.64
MSH6-208ENST00000493177 LRP6O75581 1613 aa19.03■□□□□ 0.64
MSH6-208ENST00000493177 KIAA1210Q9ULL0 1709 aa19.02■□□□□ 0.63
MSH6-208ENST00000493177 NPHP3Q7Z494 1330 aa19.01■□□□□ 0.63
MSH6-208ENST00000493177 ARHGEF28Q8N1W1 1705 aaKnown RBP19.01■□□□□ 0.63
MSH6-208ENST00000493177 ROCK2O75116 1388 aaKnown RBP18.99■□□□□ 0.63
MSH6-208ENST00000493177 PNPLA6Q8IY17 1366 aa18.99■□□□□ 0.63
MSH6-208ENST00000493177 RGS17Q9UGC6 210 aaPredicted RBP18.99■□□□□ 0.63
MSH6-208ENST00000493177 RALGAPBQ86X10 1494 aa18.98■□□□□ 0.63
MSH6-208ENST00000493177 FOXO3O43524 673 aa18.98■□□□□ 0.63
MSH6-208ENST00000493177 TRPM1Q7Z4N2 1603 aa18.98■□□□□ 0.63
MSH6-208ENST00000493177 SOS2Q07890 1332 aaPredicted RBP18.98■□□□□ 0.63
MSH6-208ENST00000493177 MINK1Q8N4C8 1332 aaPredicted RBP18.98■□□□□ 0.63
MSH6-208ENST00000493177 XPCQ01831 940 aaPredicted RBP18.97■□□□□ 0.63
MSH6-208ENST00000493177 NBPF1Q3BBV0 1214 aa18.97■□□□□ 0.63
MSH6-208ENST00000493177 HIRIP3Q9BW71 556 aaPredicted RBP18.97■□□□□ 0.63
MSH6-208ENST00000493177 ADGRB2O60241 1585 aa18.97■□□□□ 0.63
MSH6-208ENST00000493177 CARD11Q9BXL7 1154 aa18.96■□□□□ 0.63
MSH6-208ENST00000493177 ZNF772Q68DY9 489 aaPredicted RBP18.95■□□□□ 0.62
MSH6-208ENST00000493177 POTEAQ6S8J7 498 aa18.95■□□□□ 0.62
MSH6-208ENST00000493177 EIF3AQ14152 1382 aaKnown RBP18.94■□□□□ 0.62
MSH6-208ENST00000493177 C8orf37Q96NL8 207 aa18.94■□□□□ 0.62
MSH6-208ENST00000493177 PHF8Q9UPP1 1060 aa18.94■□□□□ 0.62
MSH6-208ENST00000493177 PXDNQ92626 1479 aa18.93■□□□□ 0.62
MSH6-208ENST00000493177 ADAMTS2O95450 1211 aa18.93■□□□□ 0.62
MSH6-208ENST00000493177 COL22A1Q8NFW1 1626 aaPredicted RBP18.92■□□□□ 0.62
MSH6-208ENST00000493177 ITSN1Q15811 1721 aa18.92■□□□□ 0.62
MSH6-208ENST00000493177 USP32Q8NFA0 1604 aa18.92■□□□□ 0.62
MSH6-208ENST00000493177 ANKARQ7Z5J8 1434 aa18.91■□□□□ 0.62
MSH6-208ENST00000493177 PSME1Q06323 249 aa18.9■□□□□ 0.62
MSH6-208ENST00000493177 KRT28Q7Z3Y7 464 aa18.9■□□□□ 0.62
MSH6-208ENST00000493177 PMFBP1Q8TBY8 1022 aa18.9■□□□□ 0.62
MSH6-208ENST00000493177 AFF2P51816 1311 aa18.9■□□□□ 0.62
MSH6-208ENST00000493177 GPRASP1Q5JY77 1395 aa18.9■□□□□ 0.62
MSH6-208ENST00000493177 TULP4Q9NRJ4 1543 aa18.9■□□□□ 0.62
MSH6-208ENST00000493177 MARF1Q9Y4F3 1742 aaKnown RBP18.89■□□□□ 0.61
MSH6-208ENST00000493177 HAP1P54257 671 aaPredicted RBP18.89■□□□□ 0.61
MSH6-208ENST00000493177 LMOD2Q6P5Q4 547 aa18.89■□□□□ 0.61
MSH6-208ENST00000493177 NGLY1Q96IV0 654 aa18.89■□□□□ 0.61
MSH6-208ENST00000493177 WASLO00401 505 aaPredicted RBP18.88■□□□□ 0.61
MSH6-208ENST00000493177 PLEKHG5O94827 1062 aa18.87■□□□□ 0.61
MSH6-208ENST00000493177 QRICH2Q9H0J4 1663 aa18.87■□□□□ 0.61
MSH6-208ENST00000493177 EIF4G2P78344 907 aaKnown RBP eCLIP18.86■□□□□ 0.61
MSH6-208ENST00000493177 TNS3Q68CZ2 1445 aa18.85■□□□□ 0.61
MSH6-208ENST00000493177 USP47Q96K76 1375 aa18.85■□□□□ 0.61
MSH6-208ENST00000493177 SPATA31A3Q5VYP0 1347 aa18.84■□□□□ 0.61
MSH6-208ENST00000493177 RXRBP28702 533 aa18.84■□□□□ 0.61
MSH6-208ENST00000493177 NGDNQ8NEJ9 315 aaKnown RBP18.84■□□□□ 0.61
MSH6-208ENST00000493177 CENPJQ9HC77 1338 aaPredicted RBP18.83■□□□□ 0.61
MSH6-208ENST00000493177 HSPA5P11021 654 aaKnown RBP18.83■□□□□ 0.6
MSH6-208ENST00000493177 CDK19Q9BWU1 502 aa18.82■□□□□ 0.6
MSH6-208ENST00000493177 PRR36Q9H6K5 1346 aa18.81■□□□□ 0.6
MSH6-208ENST00000493177 USP21Q9UK80 565 aa18.81■□□□□ 0.6
MSH6-208ENST00000493177 ATP7BP35670 1465 aa18.8■□□□□ 0.6
MSH6-208ENST00000493177 SRPK2P78362 688 aaKnown RBP18.8■□□□□ 0.6
MSH6-208ENST00000493177 NUDT16Q96DE0 195 aaKnown RBP18.8■□□□□ 0.6
MSH6-208ENST00000493177 QTRT2Q9H974 415 aaKnown RBP18.8■□□□□ 0.6
MSH6-208ENST00000493177 SBNO1A3KN83 1393 aa18.8■□□□□ 0.6
MSH6-208ENST00000493177 ARHGEF10O15013 1369 aa18.8■□□□□ 0.6
MSH6-208ENST00000493177 PAK3O75914 559 aaPredicted RBP18.79■□□□□ 0.6
MSH6-208ENST00000493177 ABCA3Q99758 1704 aa18.79■□□□□ 0.6
MSH6-208ENST00000493177 TRPM3Q9HCF6 1732 aaPredicted RBP18.79■□□□□ 0.6
MSH6-208ENST00000493177 TOPAZ1Q8N9V7 1692 aa18.79■□□□□ 0.6
MSH6-208ENST00000493177 ST20-MTHFSA0A0A6YYL1 179 aa18.78■□□□□ 0.6
MSH6-208ENST00000493177 TRPC5Q9UL62 973 aaPredicted RBP18.76■□□□□ 0.59
MSH6-208ENST00000493177 ALS2Q96Q42 1657 aa18.76■□□□□ 0.59
MSH6-208ENST00000493177 RBM6P78332 1123 aaKnown RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms