RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 CPS1P31327 1500 aa30.61■■■□□ 2.49
PSPC1-204ENST00000492741 EVC2Q86UK5 1308 aa30.58■■■□□ 2.49
PSPC1-204ENST00000492741 DMRT2Q9Y5R5 561 aa30.58■■■□□ 2.49
PSPC1-204ENST00000492741 CHD2O14647 1828 aaKnown RBP30.57■■■□□ 2.49
PSPC1-204ENST00000492741 PTCH1Q13635 1447 aa30.57■■■□□ 2.48
PSPC1-204ENST00000492741 XRN1Q8IZH2 1706 aaKnown RBP30.56■■■□□ 2.48
PSPC1-204ENST00000492741 DIEXFQ68CQ4 756 aaKnown RBP30.55■■■□□ 2.48
PSPC1-204ENST00000492741 SRPK2P78362 688 aaKnown RBP30.51■■■□□ 2.47
PSPC1-204ENST00000492741 CDK19Q9BWU1 502 aa30.48■■■□□ 2.47
PSPC1-204ENST00000492741 PROSER2Q86WR7 435 aaPredicted RBP30.47■■■□□ 2.47
PSPC1-204ENST00000492741 CABP2Q9NPB3 220 aa30.47■■■□□ 2.47
PSPC1-204ENST00000492741 TULP4Q9NRJ4 1543 aa30.46■■■□□ 2.47
PSPC1-204ENST00000492741 RBM33Q96EV2 1170 aaKnown RBP30.45■■■□□ 2.47
PSPC1-204ENST00000492741 NWD1Q149M9 1564 aa30.45■■■□□ 2.47
PSPC1-204ENST00000492741 WASLO00401 505 aaPredicted RBP30.44■■■□□ 2.46
PSPC1-204ENST00000492741 C14orf37Q86TY3 774 aa30.44■■■□□ 2.46
PSPC1-204ENST00000492741 PUS7Q96PZ0 661 aaKnown RBP30.44■■■□□ 2.46
PSPC1-204ENST00000492741 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.42■■■□□ 2.46
PSPC1-204ENST00000492741 TMC1Q8TDI8 760 aa30.41■■■□□ 2.46
PSPC1-204ENST00000492741 NKTRP30414 1462 aaKnown RBP30.41■■■□□ 2.46
PSPC1-204ENST00000492741 ZNF335Q9H4Z2 1342 aaPredicted RBP30.38■■■□□ 2.45
PSPC1-204ENST00000492741 ATAD2Q6PL18 1390 aa30.37■■■□□ 2.45
PSPC1-204ENST00000492741 STRCP1A6NGW2 1772 aa30.34■■■□□ 2.45
PSPC1-204ENST00000492741 ADGRB2O60241 1585 aa30.34■■■□□ 2.45
PSPC1-204ENST00000492741 PANK3Q9H999 370 aa30.34■■■□□ 2.45
PSPC1-204ENST00000492741 NUTM2FA1L443 756 aa30.33■■■□□ 2.45
PSPC1-204ENST00000492741 SLC12A5Q9H2X9 1139 aa30.33■■■□□ 2.45
PSPC1-204ENST00000492741 NUDT16Q96DE0 195 aaKnown RBP30.32■■■□□ 2.44
PSPC1-204ENST00000492741 TMEM94Q12767 1356 aa30.31■■■□□ 2.44
PSPC1-204ENST00000492741 ADGRL3Q9HAR2 1447 aa30.31■■■□□ 2.44
PSPC1-204ENST00000492741 CABP1Q9NZU7 370 aa30.27■■■□□ 2.44
PSPC1-204ENST00000492741 CCDC61Q9Y6R9 512 aa30.27■■■□□ 2.44
PSPC1-204ENST00000492741 NALCNQ8IZF0 1738 aa30.27■■■□□ 2.44
PSPC1-204ENST00000492741 C19orf44Q9H6X5 657 aa30.27■■■□□ 2.44
PSPC1-204ENST00000492741 NINLQ9Y2I6 1382 aa30.27■■■□□ 2.44
PSPC1-204ENST00000492741 MYOM1P52179 1685 aa30.26■■■□□ 2.44
PSPC1-204ENST00000492741 NCOA3Q9Y6Q9 1424 aa30.25■■■□□ 2.43
PSPC1-204ENST00000492741 PRR36Q9H6K5 1346 aa30.23■■■□□ 2.43
PSPC1-204ENST00000492741 TERF2IPQ9NYB0 399 aa30.22■■■□□ 2.43
PSPC1-204ENST00000492741 CDC42BPGQ6DT37 1551 aa30.22■■■□□ 2.43
PSPC1-204ENST00000492741 PPIP5K1Q6PFW1 1433 aa30.22■■■□□ 2.43
PSPC1-204ENST00000492741 ANP32CO43423 234 aa30.22■■■□□ 2.43
PSPC1-204ENST00000492741 KNSTRNQ9Y448 316 aa30.22■■■□□ 2.43
PSPC1-204ENST00000492741 ATF3P18847 181 aa30.21■■■□□ 2.43
PSPC1-204ENST00000492741 ATP7BP35670 1465 aa30.21■■■□□ 2.43
PSPC1-204ENST00000492741 LRRC7Q96NW7 1537 aa30.21■■■□□ 2.43
PSPC1-204ENST00000492741 CNGB1Q14028 1251 aaPredicted RBP30.2■■■□□ 2.43
PSPC1-204ENST00000492741 HDGFL2Q7Z4V5 671 aaPredicted RBP30.2■■■□□ 2.43
PSPC1-204ENST00000492741 MSH6P52701 1360 aa30.19■■■□□ 2.42
PSPC1-204ENST00000492741 PER1O15534 1290 aaPredicted RBP30.18■■■□□ 2.42
PSPC1-204ENST00000492741 ANKRD36BQ8N2N9 1353 aa30.18■■■□□ 2.42
PSPC1-204ENST00000492741 ANKARQ7Z5J8 1434 aa30.17■■■□□ 2.42
PSPC1-204ENST00000492741 FMN2Q9NZ56 1722 aa30.16■■■□□ 2.42
PSPC1-204ENST00000492741 CARD14Q9BXL6 1004 aa30.15■■■□□ 2.42
PSPC1-204ENST00000492741 CADPS2Q86UW7 1296 aa30.14■■■□□ 2.42
PSPC1-204ENST00000492741 MIER1Q8N108 512 aa30.14■■■□□ 2.42
PSPC1-204ENST00000492741 A0A1W2PP64 1363 aa30.14■■■□□ 2.41
PSPC1-204ENST00000492741 PMFBP1Q8TBY8 1022 aa30.13■■■□□ 2.41
PSPC1-204ENST00000492741 PLEKHG3A1L390 1219 aa30.12■■■□□ 2.41
PSPC1-204ENST00000492741 DCCP43146 1447 aa30.12■■■□□ 2.41
PSPC1-204ENST00000492741 USP32Q8NFA0 1604 aa30.12■■■□□ 2.41
PSPC1-204ENST00000492741 ESCO1Q5FWF5 840 aa30.1■■■□□ 2.41
PSPC1-204ENST00000492741 NSD3Q9BZ95 1437 aa30.1■■■□□ 2.41
PSPC1-204ENST00000492741 NGDNQ8NEJ9 315 aaKnown RBP30.1■■■□□ 2.41
PSPC1-204ENST00000492741 ACEP12821 1306 aa30.09■■■□□ 2.41
PSPC1-204ENST00000492741 ZNF692Q9BU19 519 aaPredicted RBP30.09■■■□□ 2.41
PSPC1-204ENST00000492741 XIRP1Q702N8 1843 aaKnown RBP30.09■■■□□ 2.41
PSPC1-204ENST00000492741 RGPD8O14715 1765 aaPredicted RBP30.09■■■□□ 2.41
PSPC1-204ENST00000492741 CD163L1Q9NR16 1453 aa30.09■■■□□ 2.41
PSPC1-204ENST00000492741 ITSN1Q15811 1721 aa30.09■■■□□ 2.41
PSPC1-204ENST00000492741 CC2D1BQ5T0F9 858 aaKnown RBP30.08■■■□□ 2.41
PSPC1-204ENST00000492741 KTN1Q86UP2 1357 aaKnown RBP30.08■■■□□ 2.41
PSPC1-204ENST00000492741 TOPAZ1Q8N9V7 1692 aa30.07■■■□□ 2.4
PSPC1-204ENST00000492741 PHF8Q9UPP1 1060 aa30.07■■■□□ 2.4
PSPC1-204ENST00000492741 CPSF1Q10570 1443 aaKnown RBP30.05■■■□□ 2.4
PSPC1-204ENST00000492741 PRKRIP1Q9H875 184 aaPredicted RBP30.05■■■□□ 2.4
PSPC1-204ENST00000492741 CGNL1Q0VF96 1302 aa30.04■■■□□ 2.4
PSPC1-204ENST00000492741 AMER1Q5JTC6 1135 aaPredicted RBP30.04■■■□□ 2.4
PSPC1-204ENST00000492741 ORAI2Q96SN7 254 aa30.04■■■□□ 2.4
PSPC1-204ENST00000492741 LTBP4Q8N2S1 1624 aa30.03■■■□□ 2.4
PSPC1-204ENST00000492741 C1orf167Q5SNV9 1468 aa30.03■■■□□ 2.4
PSPC1-204ENST00000492741 MST1RQ04912 1400 aa30.01■■■□□ 2.39
PSPC1-204ENST00000492741 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.01■■■□□ 2.39
PSPC1-204ENST00000492741 POLR3AO14802 1390 aaPredicted RBP29.99■■■□□ 2.39
PSPC1-204ENST00000492741 RALBP1Q15311 655 aa29.98■■■□□ 2.39
PSPC1-204ENST00000492741 EDC4Q6P2E9 1401 aaKnown RBP29.98■■■□□ 2.39
PSPC1-204ENST00000492741 SLAIN2Q9P270 581 aa29.97■■■□□ 2.39
PSPC1-204ENST00000492741 NPC1L1Q9UHC9 1359 aa29.97■■■□□ 2.39
PSPC1-204ENST00000492741 PSME1Q06323 249 aa29.96■■■□□ 2.39
PSPC1-204ENST00000492741 AKAP12Q02952 1782 aa29.95■■■□□ 2.39
PSPC1-204ENST00000492741 USP6P35125 1406 aa29.95■■■□□ 2.39
PSPC1-204ENST00000492741 FOXO3O43524 673 aa29.94■■■□□ 2.38
PSPC1-204ENST00000492741 FYB1O15117 783 aa29.92■■■□□ 2.38
PSPC1-204ENST00000492741 MORC1Q86VD1 984 aa29.92■■■□□ 2.38
PSPC1-204ENST00000492741 GGNBP2Q9H3C7 697 aa29.92■■■□□ 2.38
PSPC1-204ENST00000492741 MON2Q7Z3U7 1717 aa29.92■■■□□ 2.38
PSPC1-204ENST00000492741 TTC21BQ7Z4L5 1316 aa29.91■■■□□ 2.38
PSPC1-204ENST00000492741 NSD2O96028 1365 aa29.91■■■□□ 2.38
PSPC1-204ENST00000492741 PARD3Q8TEW0 1356 aa29.9■■■□□ 2.38
PSPC1-204ENST00000492741 PAK3O75914 559 aaPredicted RBP29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms