RNA–Protein interactions for RNA: ENST00000492314.3

PBX3-210, Transcript of PBX homeobox 3, humanhuman

Gene PBX3, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-210ENST00000492314 PRAG1Q86YV5 1406 aa14.13□□□□□ -0.15
PBX3-210ENST00000492314 C1orf167Q5SNV9 1468 aa14.12□□□□□ -0.15
PBX3-210ENST00000492314 DDX17Q92841 729 aaKnown RBP14.12□□□□□ -0.15
PBX3-210ENST00000492314 SPHKAPQ2M3C7 1700 aa14.12□□□□□ -0.15
PBX3-210ENST00000492314 NEXMIFQ5QGS0 1516 aa14.11□□□□□ -0.15
PBX3-210ENST00000492314 C8orf37Q96NL8 207 aa14.11□□□□□ -0.15
PBX3-210ENST00000492314 SOS2Q07890 1332 aaPredicted RBP14.11□□□□□ -0.15
PBX3-210ENST00000492314 PTCH1Q13635 1447 aa14.09□□□□□ -0.15
PBX3-210ENST00000492314 FNBP4Q8N3X1 1017 aaPredicted RBP14.08□□□□□ -0.16
PBX3-210ENST00000492314 NGLY1Q96IV0 654 aa14.07□□□□□ -0.16
PBX3-210ENST00000492314 CLTCL1P53675 1640 aa14.07□□□□□ -0.16
PBX3-210ENST00000492314 COL22A1Q8NFW1 1626 aaPredicted RBP14.07□□□□□ -0.16
PBX3-210ENST00000492314 ATAD2Q6PL18 1390 aa14.07□□□□□ -0.16
PBX3-210ENST00000492314 ATRNO75882 1429 aa14.07□□□□□ -0.16
PBX3-210ENST00000492314 ZNF219Q9P2Y4 722 aaPredicted RBP14.06□□□□□ -0.16
PBX3-210ENST00000492314 ROBO2Q9HCK4 1378 aa14.06□□□□□ -0.16
PBX3-210ENST00000492314 DSG3P32926 999 aa14.05□□□□□ -0.16
PBX3-210ENST00000492314 MYOM2P54296 1465 aa14.05□□□□□ -0.16
PBX3-210ENST00000492314 EP400Q96L91 3159 aa14.04□□□□□ -0.16
PBX3-210ENST00000492314 ADAMTS2O95450 1211 aa14.04□□□□□ -0.16
PBX3-210ENST00000492314 ZNF326Q5BKZ1 582 aaKnown RBP14.04□□□□□ -0.16
PBX3-210ENST00000492314 ORAI2Q96SN7 254 aa14.04□□□□□ -0.16
PBX3-210ENST00000492314 TRPC5Q9UL62 973 aaPredicted RBP14.04□□□□□ -0.16
PBX3-210ENST00000492314 ITGAEP38570 1179 aa14.03□□□□□ -0.16
PBX3-210ENST00000492314 USP21Q9UK80 565 aa14.03□□□□□ -0.16
PBX3-210ENST00000492314 BCL9LQ86UU0 1499 aa14.03□□□□□ -0.16
PBX3-210ENST00000492314 PXDNQ92626 1479 aa14□□□□□ -0.17
PBX3-210ENST00000492314 HFM1A2PYH4 1435 aa14□□□□□ -0.17
PBX3-210ENST00000492314 CCDC125Q86Z20 511 aa14□□□□□ -0.17
PBX3-210ENST00000492314 KIF1BO60333 1816 aa13.99□□□□□ -0.17
PBX3-210ENST00000492314 VGFO15240 615 aaPredicted RBP13.99□□□□□ -0.17
PBX3-210ENST00000492314 CDC42BPGQ6DT37 1551 aa13.99□□□□□ -0.17
PBX3-210ENST00000492314 ZBTB22O15209 634 aa13.98□□□□□ -0.17
PBX3-210ENST00000492314 ZRANB1Q9UGI0 708 aa13.98□□□□□ -0.17
PBX3-210ENST00000492314 RPGRIP1LQ68CZ1 1315 aa13.97□□□□□ -0.17
PBX3-210ENST00000492314 MARF1Q9Y4F3 1742 aaKnown RBP13.97□□□□□ -0.17
PBX3-210ENST00000492314 NPHP3Q7Z494 1330 aa13.96□□□□□ -0.17
PBX3-210ENST00000492314 RRBP1Q9P2E9 1410 aaKnown RBP13.96□□□□□ -0.18
PBX3-210ENST00000492314 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.95□□□□□ -0.18
PBX3-210ENST00000492314 ABCB7O75027 752 aa13.95□□□□□ -0.18
PBX3-210ENST00000492314 GJD4Q96KN9 370 aaPredicted RBP13.95□□□□□ -0.18
PBX3-210ENST00000492314 NAIPQ13075 1403 aa13.95□□□□□ -0.18
PBX3-210ENST00000492314 PPLO60437 1756 aa13.94□□□□□ -0.18
PBX3-210ENST00000492314 TECPR2O15040 1411 aa13.94□□□□□ -0.18
PBX3-210ENST00000492314 SLIT2O94813 1529 aa13.94□□□□□ -0.18
PBX3-210ENST00000492314 GLI3P10071 1580 aa13.92□□□□□ -0.18
PBX3-210ENST00000492314 BLMP54132 1417 aaPredicted RBP13.91□□□□□ -0.18
PBX3-210ENST00000492314 ESCO1Q5FWF5 840 aa13.91□□□□□ -0.18
PBX3-210ENST00000492314 RALGAPBQ86X10 1494 aa13.91□□□□□ -0.18
PBX3-210ENST00000492314 FOXO3O43524 673 aa13.9□□□□□ -0.18
PBX3-210ENST00000492314 LRPPRCP42704 1394 aaKnown RBP13.89□□□□□ -0.19
PBX3-210ENST00000492314 ABCC11Q96J66 1382 aa13.89□□□□□ -0.19
PBX3-210ENST00000492314 UNC5CLQ8IV45 518 aa13.89□□□□□ -0.19
PBX3-210ENST00000492314 SPATA31A3Q5VYP0 1347 aa13.89□□□□□ -0.19
PBX3-210ENST00000492314 XPCQ01831 940 aaPredicted RBP13.88□□□□□ -0.19
PBX3-210ENST00000492314 ONECUT3O60422 494 aaPredicted RBP13.87□□□□□ -0.19
PBX3-210ENST00000492314 BRWD3Q6RI45 1802 aa13.87□□□□□ -0.19
PBX3-210ENST00000492314 ADGRF5Q8IZF2 1346 aa13.87□□□□□ -0.19
PBX3-210ENST00000492314 USP32Q8NFA0 1604 aa13.86□□□□□ -0.19
PBX3-210ENST00000492314 CCDC144AA2RUR9 1427 aa13.86□□□□□ -0.19
PBX3-210ENST00000492314 SPATA31E1Q6ZUB1 1445 aa13.86□□□□□ -0.19
PBX3-210ENST00000492314 KNDC1Q76NI1 1749 aa13.86□□□□□ -0.19
PBX3-210ENST00000492314 FMN2Q9NZ56 1722 aa13.86□□□□□ -0.19
PBX3-210ENST00000492314 LRP5O75197 1615 aa13.86□□□□□ -0.19
PBX3-210ENST00000492314 KIF1AQ12756 1690 aa13.85□□□□□ -0.19
PBX3-210ENST00000492314 WAPLQ7Z5K2 1190 aa13.85□□□□□ -0.19
PBX3-210ENST00000492314 PLEKHH1Q9ULM0 1364 aa13.84□□□□□ -0.19
PBX3-210ENST00000492314 IFT172Q9UG01 1749 aa13.84□□□□□ -0.19
PBX3-210ENST00000492314 VPS72Q15906 364 aa13.83□□□□□ -0.2
PBX3-210ENST00000492314 DEFB132Q7Z7B7 95 aa13.83□□□□□ -0.2
PBX3-210ENST00000492314 SIRT1Q96EB6 747 aa13.83□□□□□ -0.2
PBX3-210ENST00000492314 NWD2Q9ULI1 1742 aa13.83□□□□□ -0.2
PBX3-210ENST00000492314 ANKRD30BQ9BXX2 1392 aa13.83□□□□□ -0.2
PBX3-210ENST00000492314 PIK3C2GO75747 1445 aa13.82□□□□□ -0.2
PBX3-210ENST00000492314 SEPT12Q8IYM1 358 aa13.82□□□□□ -0.2
PBX3-210ENST00000492314 TNS3Q68CZ2 1445 aa13.81□□□□□ -0.2
PBX3-210ENST00000492314 KRT28Q7Z3Y7 464 aa13.81□□□□□ -0.2
PBX3-210ENST00000492314 SBNO1A3KN83 1393 aa13.81□□□□□ -0.2
PBX3-210ENST00000492314 PLCH1Q4KWH8 1693 aa13.8□□□□□ -0.2
PBX3-210ENST00000492314 NUTM2FA1L443 756 aa13.8□□□□□ -0.2
PBX3-210ENST00000492314 STK26Q9P289 416 aa13.8□□□□□ -0.2
PBX3-210ENST00000492314 YTHDC2Q9H6S0 1430 aaKnown RBP13.8□□□□□ -0.2
PBX3-210ENST00000492314 ABCA3Q99758 1704 aa13.79□□□□□ -0.2
PBX3-210ENST00000492314 TMEM132EQ6IEE7 984 aa13.79□□□□□ -0.2
PBX3-210ENST00000492314 ATF5Q9Y2D1 282 aaPredicted RBP13.79□□□□□ -0.2
PBX3-210ENST00000492314 NRXN1Q9ULB1 1477 aa13.79□□□□□ -0.2
PBX3-210ENST00000492314 RGPD8O14715 1765 aaPredicted RBP13.77□□□□□ -0.21
PBX3-210ENST00000492314 KRT27Q7Z3Y8 459 aa13.77□□□□□ -0.21
PBX3-210ENST00000492314 PHF8Q9UPP1 1060 aa13.77□□□□□ -0.21
PBX3-210ENST00000492314 ARHGEF10O15013 1369 aa13.76□□□□□ -0.21
PBX3-210ENST00000492314 FAM83GA6ND36 823 aa13.76□□□□□ -0.21
PBX3-210ENST00000492314 PSME1Q06323 249 aa13.76□□□□□ -0.21
PBX3-210ENST00000492314 POLA2Q14181 598 aa13.76□□□□□ -0.21
PBX3-210ENST00000492314 CABLES1Q8TDN4 633 aa13.76□□□□□ -0.21
PBX3-210ENST00000492314 C14orf93Q9H972 538 aaKnown RBP13.76□□□□□ -0.21
PBX3-210ENST00000492314 NRAPQ86VF7 1730 aa13.76□□□□□ -0.21
PBX3-210ENST00000492314 SF3B2Q13435 895 aaKnown RBP13.75□□□□□ -0.21
PBX3-210ENST00000492314 HRCP23327 699 aa13.74□□□□□ -0.21
PBX3-210ENST00000492314 RGL3Q3MIN7 710 aa13.74□□□□□ -0.21
PBX3-210ENST00000492314 DISP2A7MBM2 1401 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms