RNA–Protein interactions for RNA: ENST00000492235.1

TREX1-204, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3

Gene TREX1, Length 696 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-204ENST00000492235 ATAD2Q6PL18 1390 aa18.86■□□□□ 0.61
TREX1-204ENST00000492235 FNBP4Q8N3X1 1017 aaPredicted RBP18.86■□□□□ 0.61
TREX1-204ENST00000492235 ESCO1Q5FWF5 840 aa18.85■□□□□ 0.61
TREX1-204ENST00000492235 CDC42BPGQ6DT37 1551 aa18.84■□□□□ 0.61
TREX1-204ENST00000492235 ATRNO75882 1429 aa18.83■□□□□ 0.61
TREX1-204ENST00000492235 NPHP3Q7Z494 1330 aa18.83■□□□□ 0.61
TREX1-204ENST00000492235 XPCQ01831 940 aaPredicted RBP18.82■□□□□ 0.6
TREX1-204ENST00000492235 FOXD1Q16676 465 aa18.82■□□□□ 0.6
TREX1-204ENST00000492235 MARF1Q9Y4F3 1742 aaKnown RBP18.82■□□□□ 0.6
TREX1-204ENST00000492235 MYOM2P54296 1465 aa18.82■□□□□ 0.6
TREX1-204ENST00000492235 PXDNQ92626 1479 aa18.82■□□□□ 0.6
TREX1-204ENST00000492235 NUTM2FA1L443 756 aa18.81■□□□□ 0.6
TREX1-204ENST00000492235 FOXO3O43524 673 aa18.81■□□□□ 0.6
TREX1-204ENST00000492235 SRCAPQ6ZRS2 3230 aa18.8■□□□□ 0.6
TREX1-204ENST00000492235 STK26Q9P289 416 aa18.8■□□□□ 0.6
TREX1-204ENST00000492235 ADGRF5Q8IZF2 1346 aa18.79■□□□□ 0.6
TREX1-204ENST00000492235 WAPLQ7Z5K2 1190 aa18.79■□□□□ 0.6
TREX1-204ENST00000492235 BCL9LQ86UU0 1499 aa18.78■□□□□ 0.6
TREX1-204ENST00000492235 RGL3Q3MIN7 710 aa18.77■□□□□ 0.6
TREX1-204ENST00000492235 LRPPRCP42704 1394 aaKnown RBP18.76■□□□□ 0.59
TREX1-204ENST00000492235 CCDC144AA2RUR9 1427 aa18.75■□□□□ 0.59
TREX1-204ENST00000492235 IFT172Q9UG01 1749 aa18.75■□□□□ 0.59
TREX1-204ENST00000492235 TMEM132EQ6IEE7 984 aa18.75■□□□□ 0.59
TREX1-204ENST00000492235 PLEKHH1Q9ULM0 1364 aa18.75■□□□□ 0.59
TREX1-204ENST00000492235 TECPR2O15040 1411 aa18.74■□□□□ 0.59
TREX1-204ENST00000492235 GJD4Q96KN9 370 aaPredicted RBP18.74■□□□□ 0.59
TREX1-204ENST00000492235 KNDC1Q76NI1 1749 aa18.74■□□□□ 0.59
TREX1-204ENST00000492235 ZRANB1Q9UGI0 708 aa18.73■□□□□ 0.59
TREX1-204ENST00000492235 FMN2Q9NZ56 1722 aa18.73■□□□□ 0.59
TREX1-204ENST00000492235 EP400Q96L91 3159 aa18.73■□□□□ 0.59
TREX1-204ENST00000492235 SPATA31E1Q6ZUB1 1445 aa18.73■□□□□ 0.59
TREX1-204ENST00000492235 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.72■□□□□ 0.59
TREX1-204ENST00000492235 ABCC11Q96J66 1382 aa18.71■□□□□ 0.59
TREX1-204ENST00000492235 ANKRD30BQ9BXX2 1392 aa18.71■□□□□ 0.59
TREX1-204ENST00000492235 KIF1AQ12756 1690 aa18.7■□□□□ 0.58
TREX1-204ENST00000492235 SPATA31A3Q5VYP0 1347 aa18.7■□□□□ 0.58
TREX1-204ENST00000492235 GLI3P10071 1580 aa18.69■□□□□ 0.58
TREX1-204ENST00000492235 PIK3C2GO75747 1445 aa18.69■□□□□ 0.58
TREX1-204ENST00000492235 CCDC125Q86Z20 511 aa18.69■□□□□ 0.58
TREX1-204ENST00000492235 UNC5CLQ8IV45 518 aa18.69■□□□□ 0.58
TREX1-204ENST00000492235 RALGAPBQ86X10 1494 aa18.69■□□□□ 0.58
TREX1-204ENST00000492235 YTHDC2Q9H6S0 1430 aaKnown RBP18.68■□□□□ 0.58
TREX1-204ENST00000492235 KRT28Q7Z3Y7 464 aa18.68■□□□□ 0.58
TREX1-204ENST00000492235 SLIT2O94813 1529 aa18.68■□□□□ 0.58
TREX1-204ENST00000492235 RGPD8O14715 1765 aaPredicted RBP18.68■□□□□ 0.58
TREX1-204ENST00000492235 USP32Q8NFA0 1604 aa18.67■□□□□ 0.58
TREX1-204ENST00000492235 MPHOSPH9Q99550 1183 aa18.67■□□□□ 0.58
TREX1-204ENST00000492235 PLEKHG5O94827 1062 aa18.66■□□□□ 0.58
TREX1-204ENST00000492235 BRWD3Q6RI45 1802 aa18.65■□□□□ 0.58
TREX1-204ENST00000492235 HAP1P54257 671 aaPredicted RBP18.65■□□□□ 0.58
TREX1-204ENST00000492235 CABLES1Q8TDN4 633 aa18.63■□□□□ 0.57
TREX1-204ENST00000492235 PHF8Q9UPP1 1060 aa18.63■□□□□ 0.57
TREX1-204ENST00000492235 TNS3Q68CZ2 1445 aa18.63■□□□□ 0.57
TREX1-204ENST00000492235 BLMP54132 1417 aaPredicted RBP18.62■□□□□ 0.57
TREX1-204ENST00000492235 PLCH1Q4KWH8 1693 aa18.62■□□□□ 0.57
TREX1-204ENST00000492235 PSME1Q06323 249 aa18.61■□□□□ 0.57
TREX1-204ENST00000492235 SIRT1Q96EB6 747 aa18.61■□□□□ 0.57
TREX1-204ENST00000492235 C14orf93Q9H972 538 aaKnown RBP18.61■□□□□ 0.57
TREX1-204ENST00000492235 ABCA3Q99758 1704 aa18.6■□□□□ 0.57
TREX1-204ENST00000492235 SAFB2Q14151 953 aaKnown RBP eCLIP18.6■□□□□ 0.57
TREX1-204ENST00000492235 CFAP70Q5T0N1 1121 aa18.6■□□□□ 0.57
TREX1-204ENST00000492235 LMOD2Q6P5Q4 547 aa18.6■□□□□ 0.57
TREX1-204ENST00000492235 SEPT12Q8IYM1 358 aa18.6■□□□□ 0.57
TREX1-204ENST00000492235 CCDC9Q9Y3X0 531 aaKnown RBP18.6■□□□□ 0.57
TREX1-204ENST00000492235 DHX57Q6P158 1386 aaKnown RBP18.59■□□□□ 0.57
TREX1-204ENST00000492235 VPS72Q15906 364 aa18.59■□□□□ 0.57
TREX1-204ENST00000492235 DEFB132Q7Z7B7 95 aa18.59■□□□□ 0.57
TREX1-204ENST00000492235 NWD2Q9ULI1 1742 aa18.59■□□□□ 0.57
TREX1-204ENST00000492235 NRXN1Q9ULB1 1477 aa18.58■□□□□ 0.57
TREX1-204ENST00000492235 PRAM1Q96QH2 718 aa18.58■□□□□ 0.56
TREX1-204ENST00000492235 SF3B2Q13435 895 aaKnown RBP18.57■□□□□ 0.56
TREX1-204ENST00000492235 SBNO1A3KN83 1393 aa18.56■□□□□ 0.56
TREX1-204ENST00000492235 PMFBP1Q8TBY8 1022 aa18.56■□□□□ 0.56
TREX1-204ENST00000492235 ARHGEF10O15013 1369 aa18.55■□□□□ 0.56
TREX1-204ENST00000492235 KRT27Q7Z3Y8 459 aa18.54■□□□□ 0.56
TREX1-204ENST00000492235 POGKQ9P215 609 aa18.54■□□□□ 0.56
TREX1-204ENST00000492235 FAM83GA6ND36 823 aa18.53■□□□□ 0.56
TREX1-204ENST00000492235 ONECUT3O60422 494 aaPredicted RBP18.53■□□□□ 0.56
TREX1-204ENST00000492235 A0A0G2JS52 829 aa18.52■□□□□ 0.56
TREX1-204ENST00000492235 MYT1Q01538 1121 aa18.52■□□□□ 0.56
TREX1-204ENST00000492235 ANKARQ7Z5J8 1434 aa18.51■□□□□ 0.55
TREX1-204ENST00000492235 DLC1Q96QB1 1528 aa18.51■□□□□ 0.55
TREX1-204ENST00000492235 NRAPQ86VF7 1730 aa18.51■□□□□ 0.55
TREX1-204ENST00000492235 TRPM3Q9HCF6 1732 aaPredicted RBP18.51■□□□□ 0.55
TREX1-204ENST00000492235 HIRIP3Q9BW71 556 aaPredicted RBP18.5■□□□□ 0.55
TREX1-204ENST00000492235 ADGRB2O60241 1585 aa18.5■□□□□ 0.55
TREX1-204ENST00000492235 FAM98CQ17RN3 349 aaKnown RBP18.49■□□□□ 0.55
TREX1-204ENST00000492235 BTG4Q9NY30 223 aa18.49■□□□□ 0.55
TREX1-204ENST00000492235 TRAK1Q9UPV9 953 aa18.48■□□□□ 0.55
TREX1-204ENST00000492235 ALS2Q96Q42 1657 aa18.47■□□□□ 0.55
TREX1-204ENST00000492235 ADGRB1O14514 1584 aa18.47■□□□□ 0.55
TREX1-204ENST00000492235 COL14A1Q05707 1796 aaKnown RBP18.47■□□□□ 0.55
TREX1-204ENST00000492235 MINK1Q8N4C8 1332 aaPredicted RBP18.47■□□□□ 0.55
TREX1-204ENST00000492235 GPRASP1Q5JY77 1395 aa18.46■□□□□ 0.55
TREX1-204ENST00000492235 ACIN1Q9UKV3 1341 aaKnown RBP18.46■□□□□ 0.55
TREX1-204ENST00000492235 LRP5O75197 1615 aa18.45■□□□□ 0.54
TREX1-204ENST00000492235 PSDA5PKW4 1024 aaPredicted RBP18.45■□□□□ 0.54
TREX1-204ENST00000492235 BAG6P46379 1132 aa18.45■□□□□ 0.54
TREX1-204ENST00000492235 PRR36Q9H6K5 1346 aa18.45■□□□□ 0.54
TREX1-204ENST00000492235 TULP4Q9NRJ4 1543 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms