RNA–Protein interactions for RNA: ENST00000491896.1

C3orf49-202, Transcript of chromosome 3 open reading frame 49, humanhuman

TSL 2

Gene C3orf49, Length 736 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf49-202ENST00000491896 C14orf37Q86TY3 774 aa17.36■□□□□ 0.37
C3orf49-202ENST00000491896 CLSPNQ9HAW4 1339 aa17.36■□□□□ 0.37
C3orf49-202ENST00000491896 SLAIN2Q9P270 581 aa17.35■□□□□ 0.37
C3orf49-202ENST00000491896 PIP4K2BP78356 416 aa17.34■□□□□ 0.37
C3orf49-202ENST00000491896 NHSL1Q5SYE7 1610 aa17.33■□□□□ 0.37
C3orf49-202ENST00000491896 CFAP70Q5T0N1 1121 aa17.32■□□□□ 0.36
C3orf49-202ENST00000491896 ARHGEF28Q8N1W1 1705 aaKnown RBP17.32■□□□□ 0.36
C3orf49-202ENST00000491896 FMN2Q9NZ56 1722 aa17.31■□□□□ 0.36
C3orf49-202ENST00000491896 COL16A1Q07092 1604 aaPredicted RBP17.31■□□□□ 0.36
C3orf49-202ENST00000491896 TRPM1Q7Z4N2 1603 aa17.3■□□□□ 0.36
C3orf49-202ENST00000491896 HSPA1LP34931 641 aa17.3■□□□□ 0.36
C3orf49-202ENST00000491896 RBM33Q96EV2 1170 aaKnown RBP17.3■□□□□ 0.36
C3orf49-202ENST00000491896 PHLPP1O60346 1717 aa17.3■□□□□ 0.36
C3orf49-202ENST00000491896 EIF3AQ14152 1382 aaKnown RBP17.29■□□□□ 0.36
C3orf49-202ENST00000491896 C1orf167Q5SNV9 1468 aa17.29■□□□□ 0.36
C3orf49-202ENST00000491896 KIF1AQ12756 1690 aa17.29■□□□□ 0.36
C3orf49-202ENST00000491896 TMEM132EQ6IEE7 984 aa17.28■□□□□ 0.36
C3orf49-202ENST00000491896 KDM2AQ9Y2K7 1162 aa17.27■□□□□ 0.36
C3orf49-202ENST00000491896 ANKARQ7Z5J8 1434 aa17.27■□□□□ 0.35
C3orf49-202ENST00000491896 SHPRHQ149N8 1683 aa17.26■□□□□ 0.35
C3orf49-202ENST00000491896 BRINP3Q76B58 766 aa17.26■□□□□ 0.35
C3orf49-202ENST00000491896 L3MBTL2Q969R5 705 aa17.26■□□□□ 0.35
C3orf49-202ENST00000491896 GPRASP1Q5JY77 1395 aa17.25■□□□□ 0.35
C3orf49-202ENST00000491896 TONSLQ96HA7 1378 aa17.25■□□□□ 0.35
C3orf49-202ENST00000491896 STK26Q9P289 416 aa17.24■□□□□ 0.35
C3orf49-202ENST00000491896 PLEKHH1Q9ULM0 1364 aa17.24■□□□□ 0.35
C3orf49-202ENST00000491896 MED1Q15648 1581 aaPredicted RBP17.23■□□□□ 0.35
C3orf49-202ENST00000491896 JCADQ9P266 1359 aa17.23■□□□□ 0.35
C3orf49-202ENST00000491896 RALGAPBQ86X10 1494 aa17.23■□□□□ 0.35
C3orf49-202ENST00000491896 PRAM1Q96QH2 718 aa17.22■□□□□ 0.35
C3orf49-202ENST00000491896 TIMELESSQ9UNS1 1208 aa17.22■□□□□ 0.35
C3orf49-202ENST00000491896 TULP4Q9NRJ4 1543 aa17.21■□□□□ 0.35
C3orf49-202ENST00000491896 SIN3AQ96ST3 1273 aa17.21■□□□□ 0.35
C3orf49-202ENST00000491896 WAPLQ7Z5K2 1190 aa17.2■□□□□ 0.34
C3orf49-202ENST00000491896 ITSN1Q15811 1721 aa17.2■□□□□ 0.34
C3orf49-202ENST00000491896 RNF39Q9H2S5 420 aa17.19■□□□□ 0.34
C3orf49-202ENST00000491896 POGKQ9P215 609 aa17.19■□□□□ 0.34
C3orf49-202ENST00000491896 SPATA31A6Q5VVP1 1343 aa17.18■□□□□ 0.34
C3orf49-202ENST00000491896 NPHP3Q7Z494 1330 aa17.18■□□□□ 0.34
C3orf49-202ENST00000491896 ROCK2O75116 1388 aaKnown RBP17.17■□□□□ 0.34
C3orf49-202ENST00000491896 SLC4A2P04920 1241 aa17.17■□□□□ 0.34
C3orf49-202ENST00000491896 NEUROD1Q13562 356 aa17.17■□□□□ 0.34
C3orf49-202ENST00000491896 TRAK1Q9UPV9 953 aa17.17■□□□□ 0.34
C3orf49-202ENST00000491896 USP32Q8NFA0 1604 aa17.17■□□□□ 0.34
C3orf49-202ENST00000491896 SBNO2Q9Y2G9 1366 aa17.16■□□□□ 0.34
C3orf49-202ENST00000491896 PCGF6Q9BYE7 350 aa17.16■□□□□ 0.34
C3orf49-202ENST00000491896 PXDNQ92626 1479 aa17.16■□□□□ 0.34
C3orf49-202ENST00000491896 QRICH2Q9H0J4 1663 aa17.16■□□□□ 0.34
C3orf49-202ENST00000491896 SOS2Q07890 1332 aaPredicted RBP17.16■□□□□ 0.34
C3orf49-202ENST00000491896 COL22A1Q8NFW1 1626 aaPredicted RBP17.15■□□□□ 0.34
C3orf49-202ENST00000491896 TOPAZ1Q8N9V7 1692 aa17.15■□□□□ 0.34
C3orf49-202ENST00000491896 ATP7BP35670 1465 aa17.14■□□□□ 0.33
C3orf49-202ENST00000491896 LRRC59Q96AG4 307 aaKnown RBP17.13■□□□□ 0.33
C3orf49-202ENST00000491896 CENPJQ9HC77 1338 aaPredicted RBP17.13■□□□□ 0.33
C3orf49-202ENST00000491896 NBPF1Q3BBV0 1214 aa17.12■□□□□ 0.33
C3orf49-202ENST00000491896 WASLO00401 505 aaPredicted RBP17.11■□□□□ 0.33
C3orf49-202ENST00000491896 ESCO1Q5FWF5 840 aa17.1■□□□□ 0.33
C3orf49-202ENST00000491896 ORAI2Q96SN7 254 aa17.1■□□□□ 0.33
C3orf49-202ENST00000491896 PNPLA6Q8IY17 1366 aa17.09■□□□□ 0.33
C3orf49-202ENST00000491896 RGPD8O14715 1765 aaPredicted RBP17.09■□□□□ 0.33
C3orf49-202ENST00000491896 DISP3Q9P2K9 1392 aa17.08■□□□□ 0.32
C3orf49-202ENST00000491896 SBNO1A3KN83 1393 aa17.07■□□□□ 0.32
C3orf49-202ENST00000491896 MINK1Q8N4C8 1332 aaPredicted RBP17.07■□□□□ 0.32
C3orf49-202ENST00000491896 SAFB2Q14151 953 aaKnown RBP eCLIP17.07■□□□□ 0.32
C3orf49-202ENST00000491896 NBPF8Q3BBV2 869 aa17.07■□□□□ 0.32
C3orf49-202ENST00000491896 SLC24A1O60721 1099 aa17.06■□□□□ 0.32
C3orf49-202ENST00000491896 PHF8Q9UPP1 1060 aa17.06■□□□□ 0.32
C3orf49-202ENST00000491896 TNS3Q68CZ2 1445 aa17.05■□□□□ 0.32
C3orf49-202ENST00000491896 POLR3AO14802 1390 aaPredicted RBP17.05■□□□□ 0.32
C3orf49-202ENST00000491896 BRD4O60885 1362 aaPredicted RBP17.05■□□□□ 0.32
C3orf49-202ENST00000491896 TRPM3Q9HCF6 1732 aaPredicted RBP17.05■□□□□ 0.32
C3orf49-202ENST00000491896 LRP6O75581 1613 aa17.05■□□□□ 0.32
C3orf49-202ENST00000491896 ARHGEF10O15013 1369 aa17.04■□□□□ 0.32
C3orf49-202ENST00000491896 PRR36Q9H6K5 1346 aa17.03■□□□□ 0.32
C3orf49-202ENST00000491896 HIRIP3Q9BW71 556 aaPredicted RBP17.03■□□□□ 0.32
C3orf49-202ENST00000491896 CARD11Q9BXL7 1154 aa17.03■□□□□ 0.32
C3orf49-202ENST00000491896 ALS2Q96Q42 1657 aa17.03■□□□□ 0.32
C3orf49-202ENST00000491896 EVC2Q86UK5 1308 aa17.02■□□□□ 0.32
C3orf49-202ENST00000491896 FOXO3O43524 673 aa17.02■□□□□ 0.32
C3orf49-202ENST00000491896 PSME1Q06323 249 aa17.02■□□□□ 0.32
C3orf49-202ENST00000491896 SPATA31A3Q5VYP0 1347 aa17.01■□□□□ 0.31
C3orf49-202ENST00000491896 CCDC61Q9Y6R9 512 aa17.01■□□□□ 0.31
C3orf49-202ENST00000491896 ATAD2Q6PL18 1390 aa17.01■□□□□ 0.31
C3orf49-202ENST00000491896 CCER1Q8TC90 406 aaPredicted RBP17■□□□□ 0.31
C3orf49-202ENST00000491896 NUDT16Q96DE0 195 aaKnown RBP17■□□□□ 0.31
C3orf49-202ENST00000491896 MARF1Q9Y4F3 1742 aaKnown RBP17■□□□□ 0.31
C3orf49-202ENST00000491896 ABCA3Q99758 1704 aa16.99■□□□□ 0.31
C3orf49-202ENST00000491896 PLEKHG3A1L390 1219 aa16.99■□□□□ 0.31
C3orf49-202ENST00000491896 PUS7Q96PZ0 661 aaKnown RBP16.99■□□□□ 0.31
C3orf49-202ENST00000491896 CDK19Q9BWU1 502 aa16.99■□□□□ 0.31
C3orf49-202ENST00000491896 NUTM2FA1L443 756 aa16.98■□□□□ 0.31
C3orf49-202ENST00000491896 DDX17Q92841 729 aaKnown RBP16.98■□□□□ 0.31
C3orf49-202ENST00000491896 NINLQ9Y2I6 1382 aa16.97■□□□□ 0.31
C3orf49-202ENST00000491896 PPIP5K1Q6PFW1 1433 aa16.96■□□□□ 0.31
C3orf49-202ENST00000491896 KRT28Q7Z3Y7 464 aa16.96■□□□□ 0.31
C3orf49-202ENST00000491896 CRYBG1Q9Y4K1 1723 aa16.96■□□□□ 0.3
C3orf49-202ENST00000491896 SRPK2P78362 688 aaKnown RBP16.95■□□□□ 0.3
C3orf49-202ENST00000491896 U3KPZ7 1027 aaPredicted RBP16.95■□□□□ 0.3
C3orf49-202ENST00000491896 USP47Q96K76 1375 aa16.94■□□□□ 0.3
C3orf49-202ENST00000491896 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms