RNA–Protein interactions for RNA: ENST00000491734.6

EXD3-212, Transcript of exonuclease 3'-5' domain containing 3, humanhuman

TSL 1 (best)

Gene EXD3, Length 2,176 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3-212ENST00000491734 ALKQ9UM73 1620 aa23.9■■□□□ 1.42
EXD3-212ENST00000491734 TNRQ92752 1358 aa23.9■■□□□ 1.42
EXD3-212ENST00000491734 SLC12A5Q9H2X9 1139 aa23.9■■□□□ 1.42
EXD3-212ENST00000491734 RIMS2Q9UQ26 1411 aa23.9■■□□□ 1.42
EXD3-212ENST00000491734 SAFB2Q14151 953 aaKnown RBP eCLIP23.89■■□□□ 1.41
EXD3-212ENST00000491734 FER1L4A9Z1Z3 1794 aa23.87■■□□□ 1.41
EXD3-212ENST00000491734 ADAMTS8Q9UP79 889 aa23.87■■□□□ 1.41
EXD3-212ENST00000491734 BLMP54132 1417 aaPredicted RBP23.87■■□□□ 1.41
EXD3-212ENST00000491734 SETD1AO15047 1707 aaKnown RBP23.87■■□□□ 1.41
EXD3-212ENST00000491734 UBR1Q8IWV7 1749 aa23.87■■□□□ 1.41
EXD3-212ENST00000491734 C3P01024 1663 aa23.86■■□□□ 1.41
EXD3-212ENST00000491734 ZBTB47Q9UFB7 747 aaPredicted RBP23.85■■□□□ 1.41
EXD3-212ENST00000491734 TULP4Q9NRJ4 1543 aa23.83■■□□□ 1.41
EXD3-212ENST00000491734 EVC2Q86UK5 1308 aa23.83■■□□□ 1.41
EXD3-212ENST00000491734 INSRP06213 1382 aa23.83■■□□□ 1.41
EXD3-212ENST00000491734 NBR1Q14596 966 aa23.83■■□□□ 1.41
EXD3-212ENST00000491734 YTHDC2Q9H6S0 1430 aaKnown RBP23.83■■□□□ 1.41
EXD3-212ENST00000491734 PTPRMP28827 1452 aa23.83■■□□□ 1.4
EXD3-212ENST00000491734 NRXN3Q9Y4C0 1643 aa23.83■■□□□ 1.4
EXD3-212ENST00000491734 CABP2Q9NPB3 220 aa23.82■■□□□ 1.4
EXD3-212ENST00000491734 NSD3Q9BZ95 1437 aa23.82■■□□□ 1.4
EXD3-212ENST00000491734 NLRP1Q9C000 1473 aa23.81■■□□□ 1.4
EXD3-212ENST00000491734 WDR43Q15061 677 aaKnown RBP eCLIP23.8■■□□□ 1.4
EXD3-212ENST00000491734 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.8■■□□□ 1.4
EXD3-212ENST00000491734 TCERG1O14776 1098 aaKnown RBP23.79■■□□□ 1.4
EXD3-212ENST00000491734 CDCA7LQ96GN5 454 aa23.79■■□□□ 1.4
EXD3-212ENST00000491734 PUS7Q96PZ0 661 aaKnown RBP23.79■■□□□ 1.4
EXD3-212ENST00000491734 PRAM1Q96QH2 718 aa23.79■■□□□ 1.4
EXD3-212ENST00000491734 RTL5Q5HYW3 569 aaPredicted RBP23.78■■□□□ 1.4
EXD3-212ENST00000491734 RRP1P56182 461 aaKnown RBP23.78■■□□□ 1.4
EXD3-212ENST00000491734 TMEM2Q9UHN6 1383 aa23.76■■□□□ 1.39
EXD3-212ENST00000491734 MINK1Q8N4C8 1332 aaPredicted RBP23.76■■□□□ 1.39
EXD3-212ENST00000491734 DLC1Q96QB1 1528 aa23.76■■□□□ 1.39
EXD3-212ENST00000491734 PDE3BQ13370 1112 aa23.75■■□□□ 1.39
EXD3-212ENST00000491734 CEBPAP49715 358 aaPredicted RBP23.75■■□□□ 1.39
EXD3-212ENST00000491734 POGKQ9P215 609 aa23.75■■□□□ 1.39
EXD3-212ENST00000491734 MS4A1P11836 297 aa23.74■■□□□ 1.39
EXD3-212ENST00000491734 HDGFP51858 240 aaKnown RBP23.74■■□□□ 1.39
EXD3-212ENST00000491734 MORC1Q86VD1 984 aa23.74■■□□□ 1.39
EXD3-212ENST00000491734 TNNT2P45379 298 aaPredicted RBP23.73■■□□□ 1.39
EXD3-212ENST00000491734 SRPK2P78362 688 aaKnown RBP23.73■■□□□ 1.39
EXD3-212ENST00000491734 ANKRD36BQ8N2N9 1353 aa23.71■■□□□ 1.39
EXD3-212ENST00000491734 CCDC146Q8IYE0 955 aa23.7■■□□□ 1.38
EXD3-212ENST00000491734 USP35Q9P2H5 1018 aa23.7■■□□□ 1.38
EXD3-212ENST00000491734 ABCC11Q96J66 1382 aa23.69■■□□□ 1.38
EXD3-212ENST00000491734 PLEKHH1Q9ULM0 1364 aa23.68■■□□□ 1.38
EXD3-212ENST00000491734 KNDC1Q76NI1 1749 aa23.68■■□□□ 1.38
EXD3-212ENST00000491734 RCAN3Q9UKA8 241 aa23.68■■□□□ 1.38
EXD3-212ENST00000491734 CGNL1Q0VF96 1302 aa23.67■■□□□ 1.38
EXD3-212ENST00000491734 USP32Q8NFA0 1604 aa23.67■■□□□ 1.38
EXD3-212ENST00000491734 WAPLQ7Z5K2 1190 aa23.67■■□□□ 1.38
EXD3-212ENST00000491734 SLIT1O75093 1534 aa23.66■■□□□ 1.38
EXD3-212ENST00000491734 METP08581 1390 aa23.66■■□□□ 1.38
EXD3-212ENST00000491734 ARHGAP23Q9P227 1491 aa23.65■■□□□ 1.38
EXD3-212ENST00000491734 EXOC6Q8TAG9 804 aa23.65■■□□□ 1.38
EXD3-212ENST00000491734 BACH2Q9BYV9 841 aa23.65■■□□□ 1.38
EXD3-212ENST00000491734 PDE4AP27815 886 aa23.64■■□□□ 1.38
EXD3-212ENST00000491734 CDK19Q9BWU1 502 aa23.64■■□□□ 1.38
EXD3-212ENST00000491734 A0A1W2PP64 1363 aa23.64■■□□□ 1.37
EXD3-212ENST00000491734 POLR3AO14802 1390 aaPredicted RBP23.64■■□□□ 1.37
EXD3-212ENST00000491734 NINLQ9Y2I6 1382 aa23.63■■□□□ 1.37
EXD3-212ENST00000491734 RIMS1Q86UR5 1692 aaKnown RBP23.63■■□□□ 1.37
EXD3-212ENST00000491734 PLEKHG1Q9ULL1 1385 aa23.63■■□□□ 1.37
EXD3-212ENST00000491734 TECPR2O15040 1411 aa23.63■■□□□ 1.37
EXD3-212ENST00000491734 ADAMTS13Q76LX8 1427 aa23.63■■□□□ 1.37
EXD3-212ENST00000491734 ADAMTSL3P82987 1691 aa23.62■■□□□ 1.37
EXD3-212ENST00000491734 ATAD2Q6PL18 1390 aa23.61■■□□□ 1.37
EXD3-212ENST00000491734 LTKP29376 864 aa23.61■■□□□ 1.37
EXD3-212ENST00000491734 CPS1P31327 1500 aa23.61■■□□□ 1.37
EXD3-212ENST00000491734 ZNF521Q96K83 1311 aa23.61■■□□□ 1.37
EXD3-212ENST00000491734 APAF1O14727 1248 aa23.61■■□□□ 1.37
EXD3-212ENST00000491734 MTHFSP49914 203 aa23.59■■□□□ 1.37
EXD3-212ENST00000491734 MED14O60244 1454 aa23.59■■□□□ 1.37
EXD3-212ENST00000491734 FAM135BQ49AJ0 1406 aa23.59■■□□□ 1.37
EXD3-212ENST00000491734 SIRT1Q96EB6 747 aa23.58■■□□□ 1.37
EXD3-212ENST00000491734 CD163L1Q9NR16 1453 aa23.58■■□□□ 1.37
EXD3-212ENST00000491734 CABP1Q9NZU7 370 aa23.57■■□□□ 1.36
EXD3-212ENST00000491734 TXNDC2Q86VQ3 553 aa23.57■■□□□ 1.36
EXD3-212ENST00000491734 GGNBP2Q9H3C7 697 aa23.57■■□□□ 1.36
EXD3-212ENST00000491734 NSD2O96028 1365 aa23.56■■□□□ 1.36
EXD3-212ENST00000491734 PPM1GO15355 546 aaPredicted RBP23.56■■□□□ 1.36
EXD3-212ENST00000491734 PLPPR3Q6T4P5 718 aa23.56■■□□□ 1.36
EXD3-212ENST00000491734 TERF2IPQ9NYB0 399 aa23.56■■□□□ 1.36
EXD3-212ENST00000491734 CEP170BQ9Y4F5 1589 aaPredicted RBP23.55■■□□□ 1.36
EXD3-212ENST00000491734 GOLGA2Q08379 1002 aa23.55■■□□□ 1.36
EXD3-212ENST00000491734 THEMISQ8N1K5 641 aaPredicted RBP23.55■■□□□ 1.36
EXD3-212ENST00000491734 EID1Q9Y6B2 187 aa23.55■■□□□ 1.36
EXD3-212ENST00000491734 DUSP27Q5VZP5 1158 aa23.54■■□□□ 1.36
EXD3-212ENST00000491734 FYB1O15117 783 aa23.52■■□□□ 1.36
EXD3-212ENST00000491734 SHPRHQ149N8 1683 aa23.52■■□□□ 1.36
EXD3-212ENST00000491734 PLIN1O60240 522 aa23.51■■□□□ 1.35
EXD3-212ENST00000491734 HDGFL2Q7Z4V5 671 aaPredicted RBP23.51■■□□□ 1.35
EXD3-212ENST00000491734 SPINK5Q9NQ38 1064 aaPredicted RBP23.51■■□□□ 1.35
EXD3-212ENST00000491734 SLFN5Q08AF3 891 aa23.51■■□□□ 1.35
EXD3-212ENST00000491734 ZNF142P52746 1687 aaPredicted RBP23.51■■□□□ 1.35
EXD3-212ENST00000491734 DDRGK1Q96HY6 314 aa23.5■■□□□ 1.35
EXD3-212ENST00000491734 CFAP53Q96M91 514 aa23.5■■□□□ 1.35
EXD3-212ENST00000491734 DIP2AQ14689 1571 aa23.49■■□□□ 1.35
EXD3-212ENST00000491734 NPM2Q86SE8 214 aaKnown RBP23.49■■□□□ 1.35
EXD3-212ENST00000491734 NEFMP07197 916 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms