RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 LAMC1P11047 1609 aa18.71■□□□□ 0.58
SEC61A1-206ENST00000491668 CFAP70Q5T0N1 1121 aa18.7■□□□□ 0.58
SEC61A1-206ENST00000491668 YTHDC2Q9H6S0 1430 aaKnown RBP18.7■□□□□ 0.58
SEC61A1-206ENST00000491668 SPATA31A6Q5VVP1 1343 aa18.7■□□□□ 0.58
SEC61A1-206ENST00000491668 CDC42BPGQ6DT37 1551 aa18.69■□□□□ 0.58
SEC61A1-206ENST00000491668 DHX57Q6P158 1386 aaKnown RBP18.65■□□□□ 0.58
SEC61A1-206ENST00000491668 ADGRB1O14514 1584 aa18.64■□□□□ 0.58
SEC61A1-206ENST00000491668 LRRC59Q96AG4 307 aaKnown RBP18.64■□□□□ 0.57
SEC61A1-206ENST00000491668 SIRT1Q96EB6 747 aa18.64■□□□□ 0.57
SEC61A1-206ENST00000491668 SOS2Q07890 1332 aaPredicted RBP18.64■□□□□ 0.57
SEC61A1-206ENST00000491668 PNPLA6Q8IY17 1366 aa18.64■□□□□ 0.57
SEC61A1-206ENST00000491668 TRIM26Q12899 539 aaPredicted RBP18.63■□□□□ 0.57
SEC61A1-206ENST00000491668 NUTM2BA6NNL0 878 aaPredicted RBP18.61■□□□□ 0.57
SEC61A1-206ENST00000491668 NUTM2EB1AL46 878 aaPredicted RBP18.61■□□□□ 0.57
SEC61A1-206ENST00000491668 NUTM2AQ8IVF1 878 aaPredicted RBP18.61■□□□□ 0.57
SEC61A1-206ENST00000491668 DCAF11Q8TEB1 546 aa18.61■□□□□ 0.57
SEC61A1-206ENST00000491668 FMN2Q9NZ56 1722 aa18.6■□□□□ 0.57
SEC61A1-206ENST00000491668 KDM2AQ9Y2K7 1162 aa18.6■□□□□ 0.57
SEC61A1-206ENST00000491668 NUTM2FA1L443 756 aa18.59■□□□□ 0.57
SEC61A1-206ENST00000491668 ESCO1Q5FWF5 840 aa18.59■□□□□ 0.57
SEC61A1-206ENST00000491668 DLC1Q96QB1 1528 aa18.59■□□□□ 0.57
SEC61A1-206ENST00000491668 PXDNQ92626 1479 aa18.58■□□□□ 0.57
SEC61A1-206ENST00000491668 MEX3CQ5U5Q3 659 aaKnown RBP18.58■□□□□ 0.56
SEC61A1-206ENST00000491668 PRAM1Q96QH2 718 aa18.58■□□□□ 0.56
SEC61A1-206ENST00000491668 FOXO3O43524 673 aa18.56■□□□□ 0.56
SEC61A1-206ENST00000491668 XPCQ01831 940 aaPredicted RBP18.55■□□□□ 0.56
SEC61A1-206ENST00000491668 SAFB2Q14151 953 aaKnown RBP eCLIP18.55■□□□□ 0.56
SEC61A1-206ENST00000491668 RGPD8O14715 1765 aaPredicted RBP18.54■□□□□ 0.56
SEC61A1-206ENST00000491668 NPHP3Q7Z494 1330 aa18.53■□□□□ 0.56
SEC61A1-206ENST00000491668 COL22A1Q8NFW1 1626 aaPredicted RBP18.53■□□□□ 0.56
SEC61A1-206ENST00000491668 STAC3Q96MF2 364 aa18.53■□□□□ 0.56
SEC61A1-206ENST00000491668 TRAK1Q9UPV9 953 aa18.53■□□□□ 0.56
SEC61A1-206ENST00000491668 ZNF772Q68DY9 489 aaPredicted RBP18.52■□□□□ 0.56
SEC61A1-206ENST00000491668 USP32Q8NFA0 1604 aa18.52■□□□□ 0.55
SEC61A1-206ENST00000491668 AFF2P51816 1311 aa18.51■□□□□ 0.55
SEC61A1-206ENST00000491668 ADGRB2O60241 1585 aa18.51■□□□□ 0.55
SEC61A1-206ENST00000491668 ADAMTS2O95450 1211 aa18.5■□□□□ 0.55
SEC61A1-206ENST00000491668 C8orf37Q96NL8 207 aa18.5■□□□□ 0.55
SEC61A1-206ENST00000491668 POGKQ9P215 609 aa18.5■□□□□ 0.55
SEC61A1-206ENST00000491668 KIF1AQ12756 1690 aa18.5■□□□□ 0.55
SEC61A1-206ENST00000491668 HIRIP3Q9BW71 556 aaPredicted RBP18.48■□□□□ 0.55
SEC61A1-206ENST00000491668 ARHGEF28Q8N1W1 1705 aaKnown RBP18.47■□□□□ 0.55
SEC61A1-206ENST00000491668 PHF8Q9UPP1 1060 aa18.47■□□□□ 0.55
SEC61A1-206ENST00000491668 MINK1Q8N4C8 1332 aaPredicted RBP18.47■□□□□ 0.55
SEC61A1-206ENST00000491668 PCGF6Q9BYE7 350 aa18.46■□□□□ 0.55
SEC61A1-206ENST00000491668 SPATA31A3Q5VYP0 1347 aa18.46■□□□□ 0.55
SEC61A1-206ENST00000491668 PRR36Q9H6K5 1346 aa18.46■□□□□ 0.55
SEC61A1-206ENST00000491668 KRT28Q7Z3Y7 464 aa18.45■□□□□ 0.54
SEC61A1-206ENST00000491668 ANKARQ7Z5J8 1434 aa18.45■□□□□ 0.54
SEC61A1-206ENST00000491668 KIAA1210Q9ULL0 1709 aa18.44■□□□□ 0.54
SEC61A1-206ENST00000491668 NBPF1Q3BBV0 1214 aa18.44■□□□□ 0.54
SEC61A1-206ENST00000491668 NGLY1Q96IV0 654 aa18.44■□□□□ 0.54
SEC61A1-206ENST00000491668 RXRBP28702 533 aa18.43■□□□□ 0.54
SEC61A1-206ENST00000491668 SIN3AQ96ST3 1273 aa18.43■□□□□ 0.54
SEC61A1-206ENST00000491668 WASLO00401 505 aaPredicted RBP18.42■□□□□ 0.54
SEC61A1-206ENST00000491668 FNBP4Q8N3X1 1017 aaPredicted RBP18.42■□□□□ 0.54
SEC61A1-206ENST00000491668 QTRT2Q9H974 415 aaKnown RBP18.42■□□□□ 0.54
SEC61A1-206ENST00000491668 CDK12Q9NYV4 1490 aaPredicted RBP18.41■□□□□ 0.54
SEC61A1-206ENST00000491668 TULP4Q9NRJ4 1543 aa18.41■□□□□ 0.54
SEC61A1-206ENST00000491668 PMFBP1Q8TBY8 1022 aa18.41■□□□□ 0.54
SEC61A1-206ENST00000491668 L3MBTL2Q969R5 705 aa18.41■□□□□ 0.54
SEC61A1-206ENST00000491668 MARF1Q9Y4F3 1742 aaKnown RBP18.4■□□□□ 0.54
SEC61A1-206ENST00000491668 TNS3Q68CZ2 1445 aa18.4■□□□□ 0.54
SEC61A1-206ENST00000491668 BCL9LQ86UU0 1499 aa18.39■□□□□ 0.54
SEC61A1-206ENST00000491668 USP21Q9UK80 565 aa18.39■□□□□ 0.53
SEC61A1-206ENST00000491668 SBNO1A3KN83 1393 aa18.39■□□□□ 0.53
SEC61A1-206ENST00000491668 TRPM3Q9HCF6 1732 aaPredicted RBP18.38■□□□□ 0.53
SEC61A1-206ENST00000491668 RGS12O14924 1447 aa18.38■□□□□ 0.53
SEC61A1-206ENST00000491668 RBM6P78332 1123 aaKnown RBP18.37■□□□□ 0.53
SEC61A1-206ENST00000491668 PSME1Q06323 249 aa18.37■□□□□ 0.53
SEC61A1-206ENST00000491668 CABLES1Q8TDN4 633 aa18.37■□□□□ 0.53
SEC61A1-206ENST00000491668 ATP7BP35670 1465 aa18.37■□□□□ 0.53
SEC61A1-206ENST00000491668 ATRNO75882 1429 aa18.36■□□□□ 0.53
SEC61A1-206ENST00000491668 EIF3AQ14152 1382 aaKnown RBP18.35■□□□□ 0.53
SEC61A1-206ENST00000491668 ABCA3Q99758 1704 aa18.35■□□□□ 0.53
SEC61A1-206ENST00000491668 SLIT2O94813 1529 aa18.33■□□□□ 0.53
SEC61A1-206ENST00000491668 NEUROD1Q13562 356 aa18.33■□□□□ 0.52
SEC61A1-206ENST00000491668 UPF1Q92900 1129 aaKnown RBP eCLIP18.33■□□□□ 0.52
SEC61A1-206ENST00000491668 NUDT16Q96DE0 195 aaKnown RBP18.33■□□□□ 0.52
SEC61A1-206ENST00000491668 CDK19Q9BWU1 502 aa18.33■□□□□ 0.52
SEC61A1-206ENST00000491668 TRPC5Q9UL62 973 aaPredicted RBP18.33■□□□□ 0.52
SEC61A1-206ENST00000491668 ALS2Q96Q42 1657 aa18.33■□□□□ 0.52
SEC61A1-206ENST00000491668 ARHGEF10O15013 1369 aa18.31■□□□□ 0.52
SEC61A1-206ENST00000491668 PLEKHG5O94827 1062 aa18.31■□□□□ 0.52
SEC61A1-206ENST00000491668 TOPAZ1Q8N9V7 1692 aa18.31■□□□□ 0.52
SEC61A1-206ENST00000491668 TRPM1Q7Z4N2 1603 aa18.31■□□□□ 0.52
SEC61A1-206ENST00000491668 ITSN1Q15811 1721 aa18.3■□□□□ 0.52
SEC61A1-206ENST00000491668 LMOD2Q6P5Q4 547 aa18.3■□□□□ 0.52
SEC61A1-206ENST00000491668 GPRASP1Q5JY77 1395 aa18.3■□□□□ 0.52
SEC61A1-206ENST00000491668 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.29■□□□□ 0.52
SEC61A1-206ENST00000491668 EP400Q96L91 3159 aa18.29■□□□□ 0.52
SEC61A1-206ENST00000491668 NGDNQ8NEJ9 315 aaKnown RBP18.28■□□□□ 0.52
SEC61A1-206ENST00000491668 CENPJQ9HC77 1338 aaPredicted RBP18.27■□□□□ 0.52
SEC61A1-206ENST00000491668 CRYBG1Q9Y4K1 1723 aa18.27■□□□□ 0.52
SEC61A1-206ENST00000491668 GLI3P10071 1580 aa18.27■□□□□ 0.52
SEC61A1-206ENST00000491668 NBPF8Q3BBV2 869 aa18.27■□□□□ 0.52
SEC61A1-206ENST00000491668 POLR3AO14802 1390 aaPredicted RBP18.27■□□□□ 0.51
SEC61A1-206ENST00000491668 QRICH2Q9H0J4 1663 aa18.26■□□□□ 0.51
SEC61A1-206ENST00000491668 FAM83GA6ND36 823 aa18.26■□□□□ 0.51
SEC61A1-206ENST00000491668 UNC5CLQ8IV45 518 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms