RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, humanhuman

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-208ENST00000491502 ASXL1Q8IXJ9 1541 aa19.06■□□□□ 0.64
NUP188-208ENST00000491502 PHLPP1O60346 1717 aa19.06■□□□□ 0.64
NUP188-208ENST00000491502 KNDC1Q76NI1 1749 aa19.05■□□□□ 0.64
NUP188-208ENST00000491502 MED1Q15648 1581 aaPredicted RBP19.04■□□□□ 0.64
NUP188-208ENST00000491502 JCADQ9P266 1359 aa19.04■□□□□ 0.64
NUP188-208ENST00000491502 AHDC1Q5TGY3 1603 aaPredicted RBP19.03■□□□□ 0.64
NUP188-208ENST00000491502 C1orf167Q5SNV9 1468 aa19.03■□□□□ 0.64
NUP188-208ENST00000491502 PHF23Q9BUL5 403 aaPredicted RBP19.01■□□□□ 0.63
NUP188-208ENST00000491502 POGKQ9P215 609 aa19.01■□□□□ 0.63
NUP188-208ENST00000491502 PLEKHH1Q9ULM0 1364 aa19■□□□□ 0.63
NUP188-208ENST00000491502 COL16A1Q07092 1604 aaPredicted RBP19■□□□□ 0.63
NUP188-208ENST00000491502 DLC1Q96QB1 1528 aa19■□□□□ 0.63
NUP188-208ENST00000491502 CDC42BPGQ6DT37 1551 aa18.99■□□□□ 0.63
NUP188-208ENST00000491502 LRRC59Q96AG4 307 aaKnown RBP18.99■□□□□ 0.63
NUP188-208ENST00000491502 PRAM1Q96QH2 718 aa18.99■□□□□ 0.63
NUP188-208ENST00000491502 ADGRB1O14514 1584 aa18.98■□□□□ 0.63
NUP188-208ENST00000491502 ORAI2Q96SN7 254 aa18.98■□□□□ 0.63
NUP188-208ENST00000491502 TRAK1Q9UPV9 953 aa18.98■□□□□ 0.63
NUP188-208ENST00000491502 SPATA31A6Q5VVP1 1343 aa18.98■□□□□ 0.63
NUP188-208ENST00000491502 ESCO1Q5FWF5 840 aa18.96■□□□□ 0.63
NUP188-208ENST00000491502 NHSL1Q5SYE7 1610 aa18.96■□□□□ 0.63
NUP188-208ENST00000491502 EIF4G2P78344 907 aaKnown RBP eCLIP18.94■□□□□ 0.622e-12■■■■■ 51.9
NUP188-208ENST00000491502 SAFB2Q14151 953 aaKnown RBP eCLIP18.94■□□□□ 0.62
NUP188-208ENST00000491502 ILDR2Q71H61 639 aa18.94■□□□□ 0.62
NUP188-208ENST00000491502 NBPF8Q3BBV2 869 aa18.93■□□□□ 0.62
NUP188-208ENST00000491502 NPHP3Q7Z494 1330 aa18.93■□□□□ 0.62
NUP188-208ENST00000491502 KIAA1210Q9ULL0 1709 aa18.92■□□□□ 0.62
NUP188-208ENST00000491502 DDX17Q92841 729 aaKnown RBP18.92■□□□□ 0.62
NUP188-208ENST00000491502 SOS2Q07890 1332 aaPredicted RBP18.92■□□□□ 0.62
NUP188-208ENST00000491502 NUTM2FA1L443 756 aa18.91■□□□□ 0.62
NUP188-208ENST00000491502 SHPRHQ149N8 1683 aa18.91■□□□□ 0.62
NUP188-208ENST00000491502 FMN2Q9NZ56 1722 aa18.9■□□□□ 0.62
NUP188-208ENST00000491502 FOXO3O43524 673 aa18.88■□□□□ 0.61
NUP188-208ENST00000491502 NBPF1Q3BBV0 1214 aa18.88■□□□□ 0.61
NUP188-208ENST00000491502 MINK1Q8N4C8 1332 aaPredicted RBP18.88■□□□□ 0.61
NUP188-208ENST00000491502 EIF3AQ14152 1382 aaKnown RBP18.88■□□□□ 0.61
NUP188-208ENST00000491502 RALGAPBQ86X10 1494 aa18.88■□□□□ 0.61
NUP188-208ENST00000491502 MEX3CQ5U5Q3 659 aaKnown RBP18.87■□□□□ 0.61
NUP188-208ENST00000491502 WASLO00401 505 aaPredicted RBP18.86■□□□□ 0.61
NUP188-208ENST00000491502 CARD11Q9BXL7 1154 aa18.86■□□□□ 0.61
NUP188-208ENST00000491502 PHF8Q9UPP1 1060 aa18.86■□□□□ 0.61
NUP188-208ENST00000491502 ADGRB2O60241 1585 aa18.85■□□□□ 0.61
NUP188-208ENST00000491502 ANKARQ7Z5J8 1434 aa18.85■□□□□ 0.61
NUP188-208ENST00000491502 ROCK2O75116 1388 aaKnown RBP18.85■□□□□ 0.61
NUP188-208ENST00000491502 PNPLA6Q8IY17 1366 aa18.85■□□□□ 0.61
NUP188-208ENST00000491502 NUTM2BA6NNL0 878 aaPredicted RBP18.85■□□□□ 0.61
NUP188-208ENST00000491502 NUTM2EB1AL46 878 aaPredicted RBP18.85■□□□□ 0.61
NUP188-208ENST00000491502 NUTM2AQ8IVF1 878 aaPredicted RBP18.85■□□□□ 0.61
NUP188-208ENST00000491502 HIRIP3Q9BW71 556 aaPredicted RBP18.85■□□□□ 0.61
NUP188-208ENST00000491502 RGS17Q9UGC6 210 aaPredicted RBP18.85■□□□□ 0.61
NUP188-208ENST00000491502 PSME1Q06323 249 aa18.84■□□□□ 0.61
NUP188-208ENST00000491502 KIF1AQ12756 1690 aa18.83■□□□□ 0.61
NUP188-208ENST00000491502 ARHGEF28Q8N1W1 1705 aaKnown RBP18.83■□□□□ 0.6
NUP188-208ENST00000491502 SOCS7O14512 581 aa18.82■□□□□ 0.6
NUP188-208ENST00000491502 HSPA5P11021 654 aaKnown RBP18.82■□□□□ 0.6
NUP188-208ENST00000491502 DIEXFQ68CQ4 756 aaKnown RBP18.82■□□□□ 0.6
NUP188-208ENST00000491502 KRT28Q7Z3Y7 464 aa18.82■□□□□ 0.6
NUP188-208ENST00000491502 LRP6O75581 1613 aa18.82■□□□□ 0.6
NUP188-208ENST00000491502 PXDNQ92626 1479 aa18.81■□□□□ 0.6
NUP188-208ENST00000491502 GPRASP1Q5JY77 1395 aa18.81■□□□□ 0.6
NUP188-208ENST00000491502 XPCQ01831 940 aaPredicted RBP18.8■□□□□ 0.6
NUP188-208ENST00000491502 ZNF772Q68DY9 489 aaPredicted RBP18.8■□□□□ 0.6
NUP188-208ENST00000491502 RGPD8O14715 1765 aaPredicted RBP18.8■□□□□ 0.6
NUP188-208ENST00000491502 CENPJQ9HC77 1338 aaPredicted RBP18.79■□□□□ 0.6
NUP188-208ENST00000491502 USP47Q96K76 1375 aa18.79■□□□□ 0.6
NUP188-208ENST00000491502 TULP4Q9NRJ4 1543 aa18.79■□□□□ 0.6
NUP188-208ENST00000491502 PMFBP1Q8TBY8 1022 aa18.78■□□□□ 0.6
NUP188-208ENST00000491502 CDK19Q9BWU1 502 aa18.78■□□□□ 0.6
NUP188-208ENST00000491502 SPATA31A3Q5VYP0 1347 aa18.77■□□□□ 0.6
NUP188-208ENST00000491502 POTEAQ6S8J7 498 aa18.77■□□□□ 0.6
NUP188-208ENST00000491502 NUDT16Q96DE0 195 aaKnown RBP18.77■□□□□ 0.6
NUP188-208ENST00000491502 PRR36Q9H6K5 1346 aa18.76■□□□□ 0.59
NUP188-208ENST00000491502 TRPM1Q7Z4N2 1603 aa18.76■□□□□ 0.59
NUP188-208ENST00000491502 SLC24A1O60721 1099 aa18.76■□□□□ 0.59
NUP188-208ENST00000491502 USP32Q8NFA0 1604 aa18.75■□□□□ 0.59
NUP188-208ENST00000491502 SBNO1A3KN83 1393 aa18.75■□□□□ 0.59
NUP188-208ENST00000491502 COL22A1Q8NFW1 1626 aaPredicted RBP18.74■□□□□ 0.59
NUP188-208ENST00000491502 ADAMTS2O95450 1211 aa18.74■□□□□ 0.59
NUP188-208ENST00000491502 NGDNQ8NEJ9 315 aaKnown RBP18.74■□□□□ 0.59
NUP188-208ENST00000491502 NGLY1Q96IV0 654 aa18.73■□□□□ 0.59
NUP188-208ENST00000491502 C8orf37Q96NL8 207 aa18.73■□□□□ 0.59
NUP188-208ENST00000491502 CCDC61Q9Y6R9 512 aa18.73■□□□□ 0.59
NUP188-208ENST00000491502 AFF2P51816 1311 aa18.73■□□□□ 0.59
NUP188-208ENST00000491502 ARHGEF10O15013 1369 aa18.71■□□□□ 0.59
NUP188-208ENST00000491502 SRPK2P78362 688 aaKnown RBP18.71■□□□□ 0.59
NUP188-208ENST00000491502 TNS3Q68CZ2 1445 aa18.71■□□□□ 0.59
NUP188-208ENST00000491502 PLEKHG3A1L390 1219 aa18.7■□□□□ 0.58
NUP188-208ENST00000491502 ITSN1Q15811 1721 aa18.7■□□□□ 0.58
NUP188-208ENST00000491502 LMOD2Q6P5Q4 547 aa18.7■□□□□ 0.58
NUP188-208ENST00000491502 ATP7BP35670 1465 aa18.7■□□□□ 0.58
NUP188-208ENST00000491502 EVC2Q86UK5 1308 aa18.69■□□□□ 0.58
NUP188-208ENST00000491502 QRICH2Q9H0J4 1663 aa18.67■□□□□ 0.58
NUP188-208ENST00000491502 ST20-MTHFSA0A0A6YYL1 179 aa18.67■□□□□ 0.58
NUP188-208ENST00000491502 RXRBP28702 533 aa18.67■□□□□ 0.58
NUP188-208ENST00000491502 HAP1P54257 671 aaPredicted RBP18.67■□□□□ 0.58
NUP188-208ENST00000491502 FNBP4Q8N3X1 1017 aaPredicted RBP18.67■□□□□ 0.58
NUP188-208ENST00000491502 QTRT2Q9H974 415 aaKnown RBP18.67■□□□□ 0.58
NUP188-208ENST00000491502 CABP2Q9NPB3 220 aa18.66■□□□□ 0.58
NUP188-208ENST00000491502 PAK3O75914 559 aaPredicted RBP18.65■□□□□ 0.58
NUP188-208ENST00000491502 USP21Q9UK80 565 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms