RNA–Protein interactions for RNA: ENST00000491362.1

USP30-207, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 2

Gene USP30, Length 745 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-207ENST00000491362 NALCNQ8IZF0 1738 aa12.7□□□□□ -0.38
USP30-207ENST00000491362 C1orf167Q5SNV9 1468 aa12.69□□□□□ -0.38
USP30-207ENST00000491362 TECPR2O15040 1411 aa12.69□□□□□ -0.38
USP30-207ENST00000491362 ABCC11Q96J66 1382 aa12.67□□□□□ -0.38
USP30-207ENST00000491362 SOS2Q07890 1332 aaPredicted RBP12.66□□□□□ -0.38
USP30-207ENST00000491362 ADGRF5Q8IZF2 1346 aa12.66□□□□□ -0.38
USP30-207ENST00000491362 PIK3C2GO75747 1445 aa12.66□□□□□ -0.38
USP30-207ENST00000491362 SIRT1Q96EB6 747 aa12.66□□□□□ -0.38
USP30-207ENST00000491362 LRPPRCP42704 1394 aaKnown RBP12.66□□□□□ -0.38
USP30-207ENST00000491362 IFT172Q9UG01 1749 aa12.65□□□□□ -0.38
USP30-207ENST00000491362 PNPLA6Q8IY17 1366 aa12.65□□□□□ -0.38
USP30-207ENST00000491362 CDK12Q9NYV4 1490 aaPredicted RBP12.65□□□□□ -0.38
USP30-207ENST00000491362 CDC42BPGQ6DT37 1551 aa12.64□□□□□ -0.39
USP30-207ENST00000491362 MEX3CQ5U5Q3 659 aaKnown RBP12.64□□□□□ -0.39
USP30-207ENST00000491362 NRXN1Q9ULB1 1477 aa12.64□□□□□ -0.39
USP30-207ENST00000491362 HRCP23327 699 aa12.63□□□□□ -0.39
USP30-207ENST00000491362 MYOM2P54296 1465 aa12.62□□□□□ -0.39
USP30-207ENST00000491362 RGL3Q3MIN7 710 aa12.62□□□□□ -0.39
USP30-207ENST00000491362 ORAI2Q96SN7 254 aa12.62□□□□□ -0.39
USP30-207ENST00000491362 C14orf93Q9H972 538 aaKnown RBP12.62□□□□□ -0.39
USP30-207ENST00000491362 KNDC1Q76NI1 1749 aa12.62□□□□□ -0.39
USP30-207ENST00000491362 NPHP3Q7Z494 1330 aa12.61□□□□□ -0.39
USP30-207ENST00000491362 DCAF8L1A6NGE4 600 aa12.6□□□□□ -0.39
USP30-207ENST00000491362 RXRBP28702 533 aa12.6□□□□□ -0.39
USP30-207ENST00000491362 DDX17Q92841 729 aaKnown RBP12.6□□□□□ -0.39
USP30-207ENST00000491362 STAC3Q96MF2 364 aa12.6□□□□□ -0.39
USP30-207ENST00000491362 YTHDC2Q9H6S0 1430 aaKnown RBP12.6□□□□□ -0.39
USP30-207ENST00000491362 RAB3GAP2Q9H2M9 1393 aa12.59□□□□□ -0.39
USP30-207ENST00000491362 NUTM2BA6NNL0 878 aaPredicted RBP12.59□□□□□ -0.39
USP30-207ENST00000491362 NUTM2EB1AL46 878 aaPredicted RBP12.59□□□□□ -0.39
USP30-207ENST00000491362 NUTM2AQ8IVF1 878 aaPredicted RBP12.59□□□□□ -0.39
USP30-207ENST00000491362 AFF2P51816 1311 aa12.59□□□□□ -0.39
USP30-207ENST00000491362 COL22A1Q8NFW1 1626 aaPredicted RBP12.59□□□□□ -0.39
USP30-207ENST00000491362 PXDNQ92626 1479 aa12.58□□□□□ -0.4
USP30-207ENST00000491362 ESCO1Q5FWF5 840 aa12.57□□□□□ -0.4
USP30-207ENST00000491362 TMEM132EQ6IEE7 984 aa12.57□□□□□ -0.4
USP30-207ENST00000491362 WAPLQ7Z5K2 1190 aa12.57□□□□□ -0.4
USP30-207ENST00000491362 FNBP4Q8N3X1 1017 aaPredicted RBP12.57□□□□□ -0.4
USP30-207ENST00000491362 DHX57Q6P158 1386 aaKnown RBP12.56□□□□□ -0.4
USP30-207ENST00000491362 RBM6P78332 1123 aaKnown RBP12.56□□□□□ -0.4
USP30-207ENST00000491362 STK26Q9P289 416 aa12.56□□□□□ -0.4
USP30-207ENST00000491362 PLEKHH1Q9ULM0 1364 aa12.56□□□□□ -0.4
USP30-207ENST00000491362 C8orf37Q96NL8 207 aa12.55□□□□□ -0.4
USP30-207ENST00000491362 QTRT2Q9H974 415 aaKnown RBP12.55□□□□□ -0.4
USP30-207ENST00000491362 DLC1Q96QB1 1528 aa12.55□□□□□ -0.4
USP30-207ENST00000491362 FMN2Q9NZ56 1722 aa12.54□□□□□ -0.4
USP30-207ENST00000491362 CFAP70Q5T0N1 1121 aa12.54□□□□□ -0.4
USP30-207ENST00000491362 UPF1Q92900 1129 aaKnown RBP eCLIP12.54□□□□□ -0.4
USP30-207ENST00000491362 NGLY1Q96IV0 654 aa12.54□□□□□ -0.4
USP30-207ENST00000491362 FOXO3O43524 673 aa12.53□□□□□ -0.4
USP30-207ENST00000491362 KIF1AQ12756 1690 aa12.53□□□□□ -0.4
USP30-207ENST00000491362 ADGRB1O14514 1584 aa12.52□□□□□ -0.41
USP30-207ENST00000491362 ADAMTS2O95450 1211 aa12.51□□□□□ -0.41
USP30-207ENST00000491362 TRPC5Q9UL62 973 aaPredicted RBP12.51□□□□□ -0.41
USP30-207ENST00000491362 SPATA31A3Q5VYP0 1347 aa12.51□□□□□ -0.41
USP30-207ENST00000491362 ANKARQ7Z5J8 1434 aa12.51□□□□□ -0.41
USP30-207ENST00000491362 USP21Q9UK80 565 aa12.5□□□□□ -0.41
USP30-207ENST00000491362 RGS12O14924 1447 aa12.5□□□□□ -0.41
USP30-207ENST00000491362 ADGRB2O60241 1585 aa12.5□□□□□ -0.41
USP30-207ENST00000491362 ATRNO75882 1429 aa12.49□□□□□ -0.41
USP30-207ENST00000491362 PRAM1Q96QH2 718 aa12.49□□□□□ -0.41
USP30-207ENST00000491362 BCL9LQ86UU0 1499 aa12.48□□□□□ -0.41
USP30-207ENST00000491362 SBNO1A3KN83 1393 aa12.48□□□□□ -0.41
USP30-207ENST00000491362 PSME1Q06323 249 aa12.48□□□□□ -0.41
USP30-207ENST00000491362 PHF8Q9UPP1 1060 aa12.48□□□□□ -0.41
USP30-207ENST00000491362 EIF3AQ14152 1382 aaKnown RBP12.47□□□□□ -0.41
USP30-207ENST00000491362 KRT28Q7Z3Y7 464 aa12.47□□□□□ -0.41
USP30-207ENST00000491362 MARF1Q9Y4F3 1742 aaKnown RBP12.46□□□□□ -0.41
USP30-207ENST00000491362 NUTM2FA1L443 756 aa12.46□□□□□ -0.41
USP30-207ENST00000491362 FKBP8Q14318 412 aa12.46□□□□□ -0.41
USP30-207ENST00000491362 DCAF11Q8TEB1 546 aa12.46□□□□□ -0.41
USP30-207ENST00000491362 POGKQ9P215 609 aa12.46□□□□□ -0.41
USP30-207ENST00000491362 SLIT2O94813 1529 aa12.46□□□□□ -0.42
USP30-207ENST00000491362 TNS3Q68CZ2 1445 aa12.45□□□□□ -0.42
USP30-207ENST00000491362 XPCQ01831 940 aaPredicted RBP12.45□□□□□ -0.42
USP30-207ENST00000491362 ARHGEF10O15013 1369 aa12.44□□□□□ -0.42
USP30-207ENST00000491362 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.44□□□□□ -0.42
USP30-207ENST00000491362 USP32Q8NFA0 1604 aa12.44□□□□□ -0.42
USP30-207ENST00000491362 ATAD2Q6PL18 1390 aa12.43□□□□□ -0.42
USP30-207ENST00000491362 UNC5CLQ8IV45 518 aa12.43□□□□□ -0.42
USP30-207ENST00000491362 GJD4Q96KN9 370 aaPredicted RBP12.43□□□□□ -0.42
USP30-207ENST00000491362 TULP4Q9NRJ4 1543 aa12.42□□□□□ -0.42
USP30-207ENST00000491362 WASLO00401 505 aaPredicted RBP12.42□□□□□ -0.42
USP30-207ENST00000491362 TRAK1Q9UPV9 953 aa12.42□□□□□ -0.42
USP30-207ENST00000491362 KDM2AQ9Y2K7 1162 aa12.42□□□□□ -0.42
USP30-207ENST00000491362 RGPD8O14715 1765 aaPredicted RBP12.41□□□□□ -0.42
USP30-207ENST00000491362 SAFB2Q14151 953 aaKnown RBP eCLIP12.41□□□□□ -0.42
USP30-207ENST00000491362 CCDC125Q86Z20 511 aa12.41□□□□□ -0.42
USP30-207ENST00000491362 ONECUT3O60422 494 aaPredicted RBP12.4□□□□□ -0.42
USP30-207ENST00000491362 ATF5Q9Y2D1 282 aaPredicted RBP12.4□□□□□ -0.42
USP30-207ENST00000491362 KIAA1210Q9ULL0 1709 aa12.4□□□□□ -0.43
USP30-207ENST00000491362 PRR36Q9H6K5 1346 aa12.39□□□□□ -0.43
USP30-207ENST00000491362 VPS72Q15906 364 aa12.39□□□□□ -0.43
USP30-207ENST00000491362 SAMD1Q6SPF0 538 aaPredicted RBP12.39□□□□□ -0.43
USP30-207ENST00000491362 GPRASP1Q5JY77 1395 aa12.39□□□□□ -0.43
USP30-207ENST00000491362 TRPM3Q9HCF6 1732 aaPredicted RBP12.39□□□□□ -0.43
USP30-207ENST00000491362 NWD2Q9ULI1 1742 aa12.38□□□□□ -0.43
USP30-207ENST00000491362 RALGAPBQ86X10 1494 aa12.38□□□□□ -0.43
USP30-207ENST00000491362 MINK1Q8N4C8 1332 aaPredicted RBP12.37□□□□□ -0.43
USP30-207ENST00000491362 PMFBP1Q8TBY8 1022 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms