RNA–Protein interactions for RNA: ENST00000491064.5

CTDSP1-210, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-210ENST00000491064 MARF1Q9Y4F3 1742 aaKnown RBP20.8■□□□□ 0.92
CTDSP1-210ENST00000491064 ZRANB1Q9UGI0 708 aa20.78■□□□□ 0.92
CTDSP1-210ENST00000491064 BCL9LQ86UU0 1499 aa20.77■□□□□ 0.92
CTDSP1-210ENST00000491064 FOXD1Q16676 465 aa20.77■□□□□ 0.92
CTDSP1-210ENST00000491064 PPLO60437 1756 aa20.77■□□□□ 0.91
CTDSP1-210ENST00000491064 CDC42BPGQ6DT37 1551 aa20.76■□□□□ 0.91
CTDSP1-210ENST00000491064 PXDNQ92626 1479 aa20.76■□□□□ 0.91
CTDSP1-210ENST00000491064 NPHP3Q7Z494 1330 aa20.76■□□□□ 0.91
CTDSP1-210ENST00000491064 RPGRIP1LQ68CZ1 1315 aa20.75■□□□□ 0.91
CTDSP1-210ENST00000491064 ESCO1Q5FWF5 840 aa20.74■□□□□ 0.91
CTDSP1-210ENST00000491064 CCDC125Q86Z20 511 aa20.74■□□□□ 0.91
CTDSP1-210ENST00000491064 NAIPQ13075 1403 aa20.73■□□□□ 0.91
CTDSP1-210ENST00000491064 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.73■□□□□ 0.91
CTDSP1-210ENST00000491064 PPARGC1BQ86YN6 1023 aaKnown RBP20.72■□□□□ 0.91
CTDSP1-210ENST00000491064 GJD4Q96KN9 370 aaPredicted RBP20.71■□□□□ 0.91
CTDSP1-210ENST00000491064 FOXO3O43524 673 aa20.7■□□□□ 0.9
CTDSP1-210ENST00000491064 XPCQ01831 940 aaPredicted RBP20.7■□□□□ 0.9
CTDSP1-210ENST00000491064 GLI3P10071 1580 aa20.68■□□□□ 0.9
CTDSP1-210ENST00000491064 LRPPRCP42704 1394 aaKnown RBP20.67■□□□□ 0.9
CTDSP1-210ENST00000491064 RALGAPBQ86X10 1494 aa20.66■□□□□ 0.9
CTDSP1-210ENST00000491064 SLIT2O94813 1529 aa20.66■□□□□ 0.9
CTDSP1-210ENST00000491064 TECPR2O15040 1411 aa20.65■□□□□ 0.9
CTDSP1-210ENST00000491064 RRBP1Q9P2E9 1410 aaKnown RBP20.65■□□□□ 0.9
CTDSP1-210ENST00000491064 BRWD3Q6RI45 1802 aa20.64■□□□□ 0.9
CTDSP1-210ENST00000491064 BLMP54132 1417 aaPredicted RBP20.64■□□□□ 0.89
CTDSP1-210ENST00000491064 NUTM2FA1L443 756 aa20.64■□□□□ 0.89
CTDSP1-210ENST00000491064 UNC5CLQ8IV45 518 aa20.64■□□□□ 0.89
CTDSP1-210ENST00000491064 WAPLQ7Z5K2 1190 aa20.63■□□□□ 0.89
CTDSP1-210ENST00000491064 SLC4A1APQ9BWU0 796 aaKnown RBP20.63■□□□□ 0.89
CTDSP1-210ENST00000491064 KNDC1Q76NI1 1749 aa20.62■□□□□ 0.89
CTDSP1-210ENST00000491064 FMN2Q9NZ56 1722 aa20.62■□□□□ 0.89
CTDSP1-210ENST00000491064 ADGRF5Q8IZF2 1346 aa20.62■□□□□ 0.89
CTDSP1-210ENST00000491064 USP32Q8NFA0 1604 aa20.62■□□□□ 0.89
CTDSP1-210ENST00000491064 KIF1AQ12756 1690 aa20.61■□□□□ 0.89
CTDSP1-210ENST00000491064 SPATA31A3Q5VYP0 1347 aa20.61■□□□□ 0.89
CTDSP1-210ENST00000491064 STK26Q9P289 416 aa20.61■□□□□ 0.89
CTDSP1-210ENST00000491064 PLEKHH1Q9ULM0 1364 aa20.59■□□□□ 0.89
CTDSP1-210ENST00000491064 IFT172Q9UG01 1749 aa20.59■□□□□ 0.89
CTDSP1-210ENST00000491064 CCDC144AA2RUR9 1427 aa20.59■□□□□ 0.89
CTDSP1-210ENST00000491064 ABCC11Q96J66 1382 aa20.59■□□□□ 0.89
CTDSP1-210ENST00000491064 DEFB132Q7Z7B7 95 aa20.58■□□□□ 0.89
CTDSP1-210ENST00000491064 RGPD8O14715 1765 aaPredicted RBP20.56■□□□□ 0.88
CTDSP1-210ENST00000491064 PLCH1Q4KWH8 1693 aa20.55■□□□□ 0.88
CTDSP1-210ENST00000491064 SPATA31E1Q6ZUB1 1445 aa20.55■□□□□ 0.88
CTDSP1-210ENST00000491064 TMEM132EQ6IEE7 984 aa20.55■□□□□ 0.88
CTDSP1-210ENST00000491064 KRT28Q7Z3Y7 464 aa20.55■□□□□ 0.88
CTDSP1-210ENST00000491064 SEPT12Q8IYM1 358 aa20.55■□□□□ 0.88
CTDSP1-210ENST00000491064 NWD2Q9ULI1 1742 aa20.55■□□□□ 0.88
CTDSP1-210ENST00000491064 VPS72Q15906 364 aa20.54■□□□□ 0.88
CTDSP1-210ENST00000491064 ANKRD30BQ9BXX2 1392 aa20.54■□□□□ 0.88
CTDSP1-210ENST00000491064 TNS3Q68CZ2 1445 aa20.53■□□□□ 0.88
CTDSP1-210ENST00000491064 LRP5O75197 1615 aa20.53■□□□□ 0.88
CTDSP1-210ENST00000491064 SF3B2Q13435 895 aaKnown RBP20.53■□□□□ 0.88
CTDSP1-210ENST00000491064 RGL3Q3MIN7 710 aa20.53■□□□□ 0.88
CTDSP1-210ENST00000491064 ABCA3Q99758 1704 aa20.53■□□□□ 0.88
CTDSP1-210ENST00000491064 PIK3C2GO75747 1445 aa20.53■□□□□ 0.88
CTDSP1-210ENST00000491064 YTHDC2Q9H6S0 1430 aaKnown RBP20.53■□□□□ 0.88
CTDSP1-210ENST00000491064 ONECUT3O60422 494 aaPredicted RBP20.51■□□□□ 0.87
CTDSP1-210ENST00000491064 HAP1P54257 671 aaPredicted RBP20.5■□□□□ 0.87
CTDSP1-210ENST00000491064 CABLES1Q8TDN4 633 aa20.5■□□□□ 0.87
CTDSP1-210ENST00000491064 PHF8Q9UPP1 1060 aa20.49■□□□□ 0.87
CTDSP1-210ENST00000491064 PSME1Q06323 249 aa20.48■□□□□ 0.87
CTDSP1-210ENST00000491064 KRT27Q7Z3Y8 459 aa20.48■□□□□ 0.87
CTDSP1-210ENST00000491064 SIRT1Q96EB6 747 aa20.48■□□□□ 0.87
CTDSP1-210ENST00000491064 SBNO1A3KN83 1393 aa20.47■□□□□ 0.87
CTDSP1-210ENST00000491064 CCDC9Q9Y3X0 531 aaKnown RBP20.47■□□□□ 0.87
CTDSP1-210ENST00000491064 NRXN1Q9ULB1 1477 aa20.47■□□□□ 0.87
CTDSP1-210ENST00000491064 PLEKHG5O94827 1062 aa20.46■□□□□ 0.87
CTDSP1-210ENST00000491064 ARHGEF10O15013 1369 aa20.45■□□□□ 0.86
CTDSP1-210ENST00000491064 NRAPQ86VF7 1730 aa20.44■□□□□ 0.86
CTDSP1-210ENST00000491064 FAM83GA6ND36 823 aa20.43■□□□□ 0.86
CTDSP1-210ENST00000491064 LMOD2Q6P5Q4 547 aa20.43■□□□□ 0.86
CTDSP1-210ENST00000491064 BAG6P46379 1132 aa20.42■□□□□ 0.86
CTDSP1-210ENST00000491064 C14orf93Q9H972 538 aaKnown RBP20.42■□□□□ 0.86
CTDSP1-210ENST00000491064 PSDA5PKW4 1024 aaPredicted RBP20.41■□□□□ 0.86
CTDSP1-210ENST00000491064 MPHOSPH9Q99550 1183 aa20.41■□□□□ 0.86
CTDSP1-210ENST00000491064 DHX57Q6P158 1386 aaKnown RBP20.4■□□□□ 0.86
CTDSP1-210ENST00000491064 TRPM3Q9HCF6 1732 aaPredicted RBP20.4■□□□□ 0.86
CTDSP1-210ENST00000491064 A0A0G2JS52 829 aa20.39■□□□□ 0.85
CTDSP1-210ENST00000491064 HRCP23327 699 aa20.39■□□□□ 0.85
CTDSP1-210ENST00000491064 MYT1Q01538 1121 aa20.39■□□□□ 0.85
CTDSP1-210ENST00000491064 FAM98CQ17RN3 349 aaKnown RBP20.39■□□□□ 0.85
CTDSP1-210ENST00000491064 RGPD1P0DJD0 1748 aa20.39■□□□□ 0.85
CTDSP1-210ENST00000491064 ANKARQ7Z5J8 1434 aa20.38■□□□□ 0.85
CTDSP1-210ENST00000491064 SAFB2Q14151 953 aaKnown RBP eCLIP20.38■□□□□ 0.85
CTDSP1-210ENST00000491064 CFAP70Q5T0N1 1121 aa20.38■□□□□ 0.85
CTDSP1-210ENST00000491064 PMFBP1Q8TBY8 1022 aa20.38■□□□□ 0.85
CTDSP1-210ENST00000491064 PRAM1Q96QH2 718 aa20.38■□□□□ 0.85
CTDSP1-210ENST00000491064 COL14A1Q05707 1796 aaKnown RBP20.37■□□□□ 0.85
CTDSP1-210ENST00000491064 BTG4Q9NY30 223 aa20.37■□□□□ 0.85
CTDSP1-210ENST00000491064 ALS2Q96Q42 1657 aa20.37■□□□□ 0.85
CTDSP1-210ENST00000491064 ADGRB2O60241 1585 aa20.36■□□□□ 0.85
CTDSP1-210ENST00000491064 DLC1Q96QB1 1528 aa20.36■□□□□ 0.85
CTDSP1-210ENST00000491064 EN1Q05925 392 aaPredicted RBP20.34■□□□□ 0.85
CTDSP1-210ENST00000491064 TNS1Q9HBL0 1735 aaKnown RBP20.33■□□□□ 0.84
CTDSP1-210ENST00000491064 CRYBG1Q9Y4K1 1723 aa20.33■□□□□ 0.84
CTDSP1-210ENST00000491064 THSD7AQ9UPZ6 1657 aa20.32■□□□□ 0.84
CTDSP1-210ENST00000491064 FAM182BQ5T319 152 aa20.32■□□□□ 0.84
CTDSP1-210ENST00000491064 POGKQ9P215 609 aa20.32■□□□□ 0.84
CTDSP1-210ENST00000491064 SPATA31A5Q5VU36 1347 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms