RNA–Protein interactions for RNA: ENST00000490821.1

ALMS1-205, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 578 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-205ENST00000490821 SOS2Q07890 1332 aaPredicted RBP12.24□□□□□ -0.45
ALMS1-205ENST00000490821 CCDC125Q86Z20 511 aa12.24□□□□□ -0.45
ALMS1-205ENST00000490821 MARF1Q9Y4F3 1742 aaKnown RBP12.24□□□□□ -0.45
ALMS1-205ENST00000490821 BCL9LQ86UU0 1499 aa12.23□□□□□ -0.45
ALMS1-205ENST00000490821 MYOM2P54296 1465 aa12.21□□□□□ -0.45
ALMS1-205ENST00000490821 BRWD3Q6RI45 1802 aa12.21□□□□□ -0.45
ALMS1-205ENST00000490821 C1QBPQ07021 282 aaKnown RBP12.21□□□□□ -0.45
ALMS1-205ENST00000490821 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.2□□□□□ -0.46
ALMS1-205ENST00000490821 ORAI2Q96SN7 254 aa12.2□□□□□ -0.46
ALMS1-205ENST00000490821 BLMP54132 1417 aaPredicted RBP12.2□□□□□ -0.46
ALMS1-205ENST00000490821 GLI3P10071 1580 aa12.18□□□□□ -0.46
ALMS1-205ENST00000490821 SPHKAPQ2M3C7 1700 aa12.18□□□□□ -0.46
ALMS1-205ENST00000490821 DEFB132Q7Z7B7 95 aa12.18□□□□□ -0.46
ALMS1-205ENST00000490821 GJD4Q96KN9 370 aaPredicted RBP12.18□□□□□ -0.46
ALMS1-205ENST00000490821 NEXMIFQ5QGS0 1516 aa12.16□□□□□ -0.46
ALMS1-205ENST00000490821 LOC105371045A0A1W2PR82 267 aa12.16□□□□□ -0.46
ALMS1-205ENST00000490821 RALGAPBQ86X10 1494 aa12.15□□□□□ -0.46
ALMS1-205ENST00000490821 PXDNQ92626 1479 aa12.15□□□□□ -0.46
ALMS1-205ENST00000490821 FAM50AQ14320 339 aaKnown RBP12.15□□□□□ -0.46
ALMS1-205ENST00000490821 ROBO2Q9HCK4 1378 aa12.15□□□□□ -0.46
ALMS1-205ENST00000490821 PRAG1Q86YV5 1406 aa12.14□□□□□ -0.47
ALMS1-205ENST00000490821 SLIT2O94813 1529 aa12.13□□□□□ -0.47
ALMS1-205ENST00000490821 NUP155O75694 1391 aa12.13□□□□□ -0.47
ALMS1-205ENST00000490821 CLTCL1P53675 1640 aa12.12□□□□□ -0.47
ALMS1-205ENST00000490821 SLC4A2P04920 1241 aa12.12□□□□□ -0.47
ALMS1-205ENST00000490821 APLP2Q06481 763 aa12.12□□□□□ -0.47
ALMS1-205ENST00000490821 ZNF326Q5BKZ1 582 aaKnown RBP12.12□□□□□ -0.47
ALMS1-205ENST00000490821 ROCK1Q13464 1354 aa12.11□□□□□ -0.47
ALMS1-205ENST00000490821 UNC5CLQ8IV45 518 aa12.11□□□□□ -0.47
ALMS1-205ENST00000490821 NPHP3Q7Z494 1330 aa12.11□□□□□ -0.47
ALMS1-205ENST00000490821 CDC42BPGQ6DT37 1551 aa12.1□□□□□ -0.47
ALMS1-205ENST00000490821 KIF1BO60333 1816 aa12.1□□□□□ -0.47
ALMS1-205ENST00000490821 PSDA5PKW4 1024 aaPredicted RBP12.09□□□□□ -0.47
ALMS1-205ENST00000490821 HRCP23327 699 aa12.09□□□□□ -0.47
ALMS1-205ENST00000490821 XPCQ01831 940 aaPredicted RBP12.09□□□□□ -0.47
ALMS1-205ENST00000490821 USP32Q8NFA0 1604 aa12.08□□□□□ -0.48
ALMS1-205ENST00000490821 ESCO1Q5FWF5 840 aa12.08□□□□□ -0.48
ALMS1-205ENST00000490821 HFM1A2PYH4 1435 aa12.08□□□□□ -0.48
ALMS1-205ENST00000490821 FOXO3O43524 673 aa12.07□□□□□ -0.48
ALMS1-205ENST00000490821 SF3B2Q13435 895 aaKnown RBP12.07□□□□□ -0.48
ALMS1-205ENST00000490821 SEPT12Q8IYM1 358 aa12.07□□□□□ -0.48
ALMS1-205ENST00000490821 U3KPZ7 1027 aaPredicted RBP12.07□□□□□ -0.48
ALMS1-205ENST00000490821 PLCH1Q4KWH8 1693 aa12.06□□□□□ -0.48
ALMS1-205ENST00000490821 NWD2Q9ULI1 1742 aa12.06□□□□□ -0.48
ALMS1-205ENST00000490821 ONECUT3O60422 494 aaPredicted RBP12.05□□□□□ -0.48
ALMS1-205ENST00000490821 VPS72Q15906 364 aa12.04□□□□□ -0.48
ALMS1-205ENST00000490821 SPATA31A3Q5VYP0 1347 aa12.04□□□□□ -0.48
ALMS1-205ENST00000490821 LRPPRCP42704 1394 aaKnown RBP12.04□□□□□ -0.48
ALMS1-205ENST00000490821 ABCA3Q99758 1704 aa12.03□□□□□ -0.48
ALMS1-205ENST00000490821 PPLO60437 1756 aa12.03□□□□□ -0.48
ALMS1-205ENST00000490821 KRT27Q7Z3Y8 459 aa12.03□□□□□ -0.48
ALMS1-205ENST00000490821 RGPD1P0DJD0 1748 aa12.03□□□□□ -0.48
ALMS1-205ENST00000490821 NAIPQ13075 1403 aa12.03□□□□□ -0.48
ALMS1-205ENST00000490821 BAG6P46379 1132 aa12.02□□□□□ -0.49
ALMS1-205ENST00000490821 KIF1AQ12756 1690 aa12.02□□□□□ -0.49
ALMS1-205ENST00000490821 FMN2Q9NZ56 1722 aa12.02□□□□□ -0.49
ALMS1-205ENST00000490821 RGPD8O14715 1765 aaPredicted RBP12.01□□□□□ -0.49
ALMS1-205ENST00000490821 VGFO15240 615 aaPredicted RBP12.01□□□□□ -0.49
ALMS1-205ENST00000490821 NRAPQ86VF7 1730 aa12□□□□□ -0.49
ALMS1-205ENST00000490821 TNS1Q9HBL0 1735 aaKnown RBP12□□□□□ -0.49
ALMS1-205ENST00000490821 NUTM2FA1L443 756 aa12□□□□□ -0.49
ALMS1-205ENST00000490821 CCDC144AA2RUR9 1427 aa12□□□□□ -0.49
ALMS1-205ENST00000490821 EN1Q05925 392 aaPredicted RBP11.99□□□□□ -0.49
ALMS1-205ENST00000490821 R3HDM1Q15032 1099 aaKnown RBP11.99□□□□□ -0.49
ALMS1-205ENST00000490821 SLC4A1APQ9BWU0 796 aaKnown RBP11.99□□□□□ -0.49
ALMS1-205ENST00000490821 UTRNP46939 3433 aa11.99□□□□□ -0.49
ALMS1-205ENST00000490821 DISP2A7MBM2 1401 aa11.98□□□□□ -0.49
ALMS1-205ENST00000490821 TECPR2O15040 1411 aa11.98□□□□□ -0.49
ALMS1-205ENST00000490821 TNS3Q68CZ2 1445 aa11.98□□□□□ -0.49
ALMS1-205ENST00000490821 CABLES1Q8TDN4 633 aa11.98□□□□□ -0.49
ALMS1-205ENST00000490821 KNDC1Q76NI1 1749 aa11.97□□□□□ -0.49
ALMS1-205ENST00000490821 WAPLQ7Z5K2 1190 aa11.97□□□□□ -0.49
ALMS1-205ENST00000490821 CCDC9Q9Y3X0 531 aaKnown RBP11.97□□□□□ -0.49
ALMS1-205ENST00000490821 PLEKHH1Q9ULM0 1364 aa11.96□□□□□ -0.49
ALMS1-205ENST00000490821 RPGRIP1LQ68CZ1 1315 aa11.96□□□□□ -0.49
ALMS1-205ENST00000490821 YY1P25490 414 aa11.96□□□□□ -0.49
ALMS1-205ENST00000490821 KRT28Q7Z3Y7 464 aa11.96□□□□□ -0.49
ALMS1-205ENST00000490821 IFT172Q9UG01 1749 aa11.96□□□□□ -0.49
ALMS1-205ENST00000490821 FAM83GA6ND36 823 aa11.95□□□□□ -0.5
ALMS1-205ENST00000490821 ITGAEP38570 1179 aa11.95□□□□□ -0.5
ALMS1-205ENST00000490821 FAM98CQ17RN3 349 aaKnown RBP11.95□□□□□ -0.5
ALMS1-205ENST00000490821 THSD7AQ9UPZ6 1657 aa11.94□□□□□ -0.5
ALMS1-205ENST00000490821 A0A0G2JS52 829 aa11.94□□□□□ -0.5
ALMS1-205ENST00000490821 HAP1P54257 671 aaPredicted RBP11.94□□□□□ -0.5
ALMS1-205ENST00000490821 MYT1Q01538 1121 aa11.94□□□□□ -0.5
ALMS1-205ENST00000490821 FAM182BQ5T319 152 aa11.94□□□□□ -0.5
ALMS1-205ENST00000490821 EZH2Q15910 746 aaKnown RBP11.93□□□□□ -0.5
ALMS1-205ENST00000490821 STK26Q9P289 416 aa11.93□□□□□ -0.5
ALMS1-205ENST00000490821 SBNO1A3KN83 1393 aa11.92□□□□□ -0.5
ALMS1-205ENST00000490821 ABCC11Q96J66 1382 aa11.92□□□□□ -0.5
ALMS1-205ENST00000490821 ADGRF5Q8IZF2 1346 aa11.92□□□□□ -0.5
ALMS1-205ENST00000490821 NRXN1Q9ULB1 1477 aa11.92□□□□□ -0.5
ALMS1-205ENST00000490821 PLEKHG5O94827 1062 aa11.92□□□□□ -0.5
ALMS1-205ENST00000490821 COL14A1Q05707 1796 aaKnown RBP11.92□□□□□ -0.5
ALMS1-205ENST00000490821 RREB1Q92766 1687 aa11.91□□□□□ -0.5
ALMS1-205ENST00000490821 CAMKK2Q96RR4 588 aa11.91□□□□□ -0.5
ALMS1-205ENST00000490821 PHF8Q9UPP1 1060 aa11.91□□□□□ -0.5
ALMS1-205ENST00000490821 ADGRB2O60241 1585 aa11.91□□□□□ -0.5
ALMS1-205ENST00000490821 NUP188Q5SRE5 1749 aa11.91□□□□□ -0.5
ALMS1-205ENST00000490821 TRPM3Q9HCF6 1732 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms