RNA–Protein interactions for RNA: ENST00000490710.1

PTK7-217, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 2

Gene PTK7, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-217ENST00000490710 PRAM1Q96QH2 718 aa22.37■■□□□ 1.17
PTK7-217ENST00000490710 PLEKHH1Q9ULM0 1364 aa22.37■■□□□ 1.17
PTK7-217ENST00000490710 PIP4K2BP78356 416 aa22.36■■□□□ 1.17
PTK7-217ENST00000490710 SLAIN2Q9P270 581 aa22.36■■□□□ 1.17
PTK7-217ENST00000490710 ROCK2O75116 1388 aaKnown RBP22.36■■□□□ 1.17
PTK7-217ENST00000490710 ARHGEF28Q8N1W1 1705 aaKnown RBP22.34■■□□□ 1.17
PTK7-217ENST00000490710 SCAF1Q9H7N4 1312 aaKnown RBP22.34■■□□□ 1.17
PTK7-217ENST00000490710 RALGAPBQ86X10 1494 aa22.31■■□□□ 1.16
PTK7-217ENST00000490710 GPRASP1Q5JY77 1395 aa22.31■■□□□ 1.16
PTK7-217ENST00000490710 SAFB2Q14151 953 aaKnown RBP eCLIP22.31■■□□□ 1.16
PTK7-217ENST00000490710 CDC42BPGQ6DT37 1551 aa22.29■■□□□ 1.16
PTK7-217ENST00000490710 CARD11Q9BXL7 1154 aa22.29■■□□□ 1.16
PTK7-217ENST00000490710 MST1RQ04912 1400 aa22.28■■□□□ 1.16
PTK7-217ENST00000490710 ROBO1Q9Y6N7 1651 aa22.26■■□□□ 1.15
PTK7-217ENST00000490710 MINK1Q8N4C8 1332 aaPredicted RBP22.25■■□□□ 1.15
PTK7-217ENST00000490710 ADGRB2O60241 1585 aa22.25■■□□□ 1.15
PTK7-217ENST00000490710 CENPJQ9HC77 1338 aaPredicted RBP22.24■■□□□ 1.15
PTK7-217ENST00000490710 EIF3AQ14152 1382 aaKnown RBP22.24■■□□□ 1.15
PTK7-217ENST00000490710 FMN2Q9NZ56 1722 aa22.23■■□□□ 1.15
PTK7-217ENST00000490710 C1orf167Q5SNV9 1468 aa22.22■■□□□ 1.15
PTK7-217ENST00000490710 HIRIP3Q9BW71 556 aaPredicted RBP22.22■■□□□ 1.15
PTK7-217ENST00000490710 WASLO00401 505 aaPredicted RBP22.2■■□□□ 1.14
PTK7-217ENST00000490710 BRINP3Q76B58 766 aa22.2■■□□□ 1.14
PTK7-217ENST00000490710 QRICH2Q9H0J4 1663 aa22.2■■□□□ 1.14
PTK7-217ENST00000490710 NUTM2FA1L443 756 aa22.19■■□□□ 1.14
PTK7-217ENST00000490710 HSPA1LP34931 641 aa22.19■■□□□ 1.14
PTK7-217ENST00000490710 RGPD8O14715 1765 aaPredicted RBP22.17■■□□□ 1.14
PTK7-217ENST00000490710 ESCO1Q5FWF5 840 aa22.17■■□□□ 1.14
PTK7-217ENST00000490710 ORAI2Q96SN7 254 aa22.17■■□□□ 1.14
PTK7-217ENST00000490710 ANKARQ7Z5J8 1434 aa22.15■■□□□ 1.14
PTK7-217ENST00000490710 CDK19Q9BWU1 502 aa22.15■■□□□ 1.14
PTK7-217ENST00000490710 PHLPP1O60346 1717 aa22.13■■□□□ 1.13
PTK7-217ENST00000490710 TULP4Q9NRJ4 1543 aa22.12■■□□□ 1.13
PTK7-217ENST00000490710 NHSL1Q5SYE7 1610 aa22.12■■□□□ 1.13
PTK7-217ENST00000490710 AHDC1Q5TGY3 1603 aaPredicted RBP22.12■■□□□ 1.13
PTK7-217ENST00000490710 USP32Q8NFA0 1604 aa22.12■■□□□ 1.13
PTK7-217ENST00000490710 EVC2Q86UK5 1308 aa22.11■■□□□ 1.13
PTK7-217ENST00000490710 SBNO2Q9Y2G9 1366 aa22.11■■□□□ 1.13
PTK7-217ENST00000490710 SLC24A1O60721 1099 aa22.1■■□□□ 1.13
PTK7-217ENST00000490710 ST20-MTHFSA0A0A6YYL1 179 aa22.09■■□□□ 1.13
PTK7-217ENST00000490710 NUDT16Q96DE0 195 aaKnown RBP22.09■■□□□ 1.13
PTK7-217ENST00000490710 PHF8Q9UPP1 1060 aa22.09■■□□□ 1.13
PTK7-217ENST00000490710 KIF1AQ12756 1690 aa22.09■■□□□ 1.13
PTK7-217ENST00000490710 USP47Q96K76 1375 aa22.09■■□□□ 1.13
PTK7-217ENST00000490710 PRR36Q9H6K5 1346 aa22.08■■□□□ 1.13
PTK7-217ENST00000490710 SRPK2P78362 688 aaKnown RBP22.08■■□□□ 1.13
PTK7-217ENST00000490710 ITSN1Q15811 1721 aa22.07■■□□□ 1.12
PTK7-217ENST00000490710 NPHP3Q7Z494 1330 aa22.06■■□□□ 1.12
PTK7-217ENST00000490710 FOXO3O43524 673 aa22.06■■□□□ 1.12
PTK7-217ENST00000490710 DDX17Q92841 729 aaKnown RBP22.06■■□□□ 1.12
PTK7-217ENST00000490710 CCDC61Q9Y6R9 512 aa22.06■■□□□ 1.12
PTK7-217ENST00000490710 COL16A1Q07092 1604 aaPredicted RBP22.06■■□□□ 1.12
PTK7-217ENST00000490710 ATP7BP35670 1465 aa22.05■■□□□ 1.12
PTK7-217ENST00000490710 CABP2Q9NPB3 220 aa22.05■■□□□ 1.12
PTK7-217ENST00000490710 PMFBP1Q8TBY8 1022 aa22.04■■□□□ 1.12
PTK7-217ENST00000490710 TESK2Q96S53 571 aa22.04■■□□□ 1.12
PTK7-217ENST00000490710 SOS2Q07890 1332 aaPredicted RBP22.04■■□□□ 1.12
PTK7-217ENST00000490710 LRRC59Q96AG4 307 aaKnown RBP22.03■■□□□ 1.12
PTK7-217ENST00000490710 EIF4G2P78344 907 aaKnown RBP eCLIP22.01■■□□□ 1.11
PTK7-217ENST00000490710 TOPAZ1Q8N9V7 1692 aa22.01■■□□□ 1.11
PTK7-217ENST00000490710 PLEKHG3A1L390 1219 aa22■■□□□ 1.11
PTK7-217ENST00000490710 PSME1Q06323 249 aa22■■□□□ 1.11
PTK7-217ENST00000490710 KRT28Q7Z3Y7 464 aa22■■□□□ 1.11
PTK7-217ENST00000490710 PUS7Q96PZ0 661 aaKnown RBP22■■□□□ 1.11
PTK7-217ENST00000490710 JCADQ9P266 1359 aa21.99■■□□□ 1.11
PTK7-217ENST00000490710 NGDNQ8NEJ9 315 aaKnown RBP21.99■■□□□ 1.11
PTK7-217ENST00000490710 PXDNQ92626 1479 aa21.98■■□□□ 1.11
PTK7-217ENST00000490710 ATAD2Q6PL18 1390 aa21.98■■□□□ 1.11
PTK7-217ENST00000490710 TMF1P82094 1093 aa21.97■■□□□ 1.11
PTK7-217ENST00000490710 XPCQ01831 940 aaPredicted RBP21.97■■□□□ 1.11
PTK7-217ENST00000490710 PPIP5K1Q6PFW1 1433 aa21.97■■□□□ 1.11
PTK7-217ENST00000490710 CABP1Q9NZU7 370 aa21.96■■□□□ 1.11
PTK7-217ENST00000490710 SHPRHQ149N8 1683 aa21.95■■□□□ 1.1
PTK7-217ENST00000490710 HSPA5P11021 654 aaKnown RBP21.95■■□□□ 1.1
PTK7-217ENST00000490710 ACEP12821 1306 aa21.95■■□□□ 1.1
PTK7-217ENST00000490710 POLR3AO14802 1390 aaPredicted RBP21.95■■□□□ 1.1
PTK7-217ENST00000490710 CDCA8Q53HL2 280 aa21.93■■□□□ 1.1
PTK7-217ENST00000490710 SBNO1A3KN83 1393 aa21.92■■□□□ 1.1
PTK7-217ENST00000490710 SPATA31A6Q5VVP1 1343 aa21.91■■□□□ 1.1
PTK7-217ENST00000490710 SPATA31A3Q5VYP0 1347 aa21.91■■□□□ 1.1
PTK7-217ENST00000490710 PNPLA6Q8IY17 1366 aa21.9■■□□□ 1.1
PTK7-217ENST00000490710 DISP3Q9P2K9 1392 aa21.9■■□□□ 1.1
PTK7-217ENST00000490710 ZNF692Q9BU19 519 aaPredicted RBP21.9■■□□□ 1.1
PTK7-217ENST00000490710 TRPM3Q9HCF6 1732 aaPredicted RBP21.89■■□□□ 1.1
PTK7-217ENST00000490710 TMC1Q8TDI8 760 aa21.88■■□□□ 1.09
PTK7-217ENST00000490710 TNS3Q68CZ2 1445 aa21.87■■□□□ 1.09
PTK7-217ENST00000490710 BRD4O60885 1362 aaPredicted RBP21.87■■□□□ 1.09
PTK7-217ENST00000490710 PAK3O75914 559 aaPredicted RBP21.86■■□□□ 1.09
PTK7-217ENST00000490710 ZEB1P37275 1124 aaPredicted RBP21.86■■□□□ 1.09
PTK7-217ENST00000490710 SLC12A5Q9H2X9 1139 aa21.86■■□□□ 1.09
PTK7-217ENST00000490710 COL22A1Q8NFW1 1626 aaPredicted RBP21.86■■□□□ 1.09
PTK7-217ENST00000490710 AKAP12Q02952 1782 aa21.86■■□□□ 1.09
PTK7-217ENST00000490710 NINLQ9Y2I6 1382 aa21.86■■□□□ 1.09
PTK7-217ENST00000490710 LMOD2Q6P5Q4 547 aa21.85■■□□□ 1.09
PTK7-217ENST00000490710 ARHGEF10O15013 1369 aa21.85■■□□□ 1.09
PTK7-217ENST00000490710 CPSF1Q10570 1443 aaKnown RBP21.84■■□□□ 1.09
PTK7-217ENST00000490710 ALS2Q96Q42 1657 aa21.84■■□□□ 1.09
PTK7-217ENST00000490710 USP6P35125 1406 aa21.83■■□□□ 1.09
PTK7-217ENST00000490710 TERF2IPQ9NYB0 399 aa21.83■■□□□ 1.09
PTK7-217ENST00000490710 MED1Q15648 1581 aaPredicted RBP21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms