RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 CDC42BPGQ6DT37 1551 aa23.39■■□□□ 1.33
COL2A1-207ENST00000490609 RGS12O14924 1447 aa23.38■■□□□ 1.33
COL2A1-207ENST00000490609 TECPR2O15040 1411 aa23.38■■□□□ 1.33
COL2A1-207ENST00000490609 RGL3Q3MIN7 710 aa23.37■■□□□ 1.33
COL2A1-207ENST00000490609 WAPLQ7Z5K2 1190 aa23.37■■□□□ 1.33
COL2A1-207ENST00000490609 PXDNQ92626 1479 aa23.36■■□□□ 1.33
COL2A1-207ENST00000490609 KNDC1Q76NI1 1749 aa23.36■■□□□ 1.33
COL2A1-207ENST00000490609 SRCAPQ6ZRS2 3230 aa23.36■■□□□ 1.33
COL2A1-207ENST00000490609 ADAMTS2O95450 1211 aa23.36■■□□□ 1.33
COL2A1-207ENST00000490609 PLEKHH1Q9ULM0 1364 aa23.36■■□□□ 1.33
COL2A1-207ENST00000490609 CCDC144AA2RUR9 1427 aa23.35■■□□□ 1.33
COL2A1-207ENST00000490609 MARF1Q9Y4F3 1742 aaKnown RBP23.34■■□□□ 1.33
COL2A1-207ENST00000490609 TMEM132EQ6IEE7 984 aa23.34■■□□□ 1.33
COL2A1-207ENST00000490609 RGPD8O14715 1765 aaPredicted RBP23.34■■□□□ 1.33
COL2A1-207ENST00000490609 PIK3C2GO75747 1445 aa23.33■■□□□ 1.33
COL2A1-207ENST00000490609 LRPPRCP42704 1394 aaKnown RBP23.33■■□□□ 1.33
COL2A1-207ENST00000490609 RBM6P78332 1123 aaKnown RBP23.33■■□□□ 1.33
COL2A1-207ENST00000490609 MYOM2P54296 1465 aa23.32■■□□□ 1.32
COL2A1-207ENST00000490609 ABCC11Q96J66 1382 aa23.32■■□□□ 1.32
COL2A1-207ENST00000490609 NGLY1Q96IV0 654 aa23.32■■□□□ 1.32
COL2A1-207ENST00000490609 STK26Q9P289 416 aa23.32■■□□□ 1.32
COL2A1-207ENST00000490609 FMN2Q9NZ56 1722 aa23.31■■□□□ 1.32
COL2A1-207ENST00000490609 ANKRD30BQ9BXX2 1392 aa23.31■■□□□ 1.32
COL2A1-207ENST00000490609 FNBP4Q8N3X1 1017 aaPredicted RBP23.31■■□□□ 1.32
COL2A1-207ENST00000490609 ESCO1Q5FWF5 840 aa23.3■■□□□ 1.32
COL2A1-207ENST00000490609 FOXO3O43524 673 aa23.28■■□□□ 1.32
COL2A1-207ENST00000490609 XPCQ01831 940 aaPredicted RBP23.28■■□□□ 1.32
COL2A1-207ENST00000490609 NUTM2FA1L443 756 aa23.27■■□□□ 1.32
COL2A1-207ENST00000490609 NRXN1Q9ULB1 1477 aa23.27■■□□□ 1.32
COL2A1-207ENST00000490609 YTHDC2Q9H6S0 1430 aaKnown RBP23.26■■□□□ 1.31
COL2A1-207ENST00000490609 BCL9LQ86UU0 1499 aa23.26■■□□□ 1.31
COL2A1-207ENST00000490609 USP21Q9UK80 565 aa23.26■■□□□ 1.31
COL2A1-207ENST00000490609 NPHP3Q7Z494 1330 aa23.26■■□□□ 1.31
COL2A1-207ENST00000490609 ATRNO75882 1429 aa23.25■■□□□ 1.31
COL2A1-207ENST00000490609 C14orf93Q9H972 538 aaKnown RBP23.24■■□□□ 1.31
COL2A1-207ENST00000490609 SIRT1Q96EB6 747 aa23.22■■□□□ 1.31
COL2A1-207ENST00000490609 CFAP70Q5T0N1 1121 aa23.2■■□□□ 1.3
COL2A1-207ENST00000490609 TRPC5Q9UL62 973 aaPredicted RBP23.2■■□□□ 1.3
COL2A1-207ENST00000490609 KIF1AQ12756 1690 aa23.19■■□□□ 1.3
COL2A1-207ENST00000490609 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.18■■□□□ 1.3
COL2A1-207ENST00000490609 SPATA31A3Q5VYP0 1347 aa23.17■■□□□ 1.3
COL2A1-207ENST00000490609 USP32Q8NFA0 1604 aa23.16■■□□□ 1.3
COL2A1-207ENST00000490609 RAB3GAP2Q9H2M9 1393 aa23.14■■□□□ 1.29
COL2A1-207ENST00000490609 SLIT2O94813 1529 aa23.13■■□□□ 1.29
COL2A1-207ENST00000490609 BRWD3Q6RI45 1802 aa23.13■■□□□ 1.29
COL2A1-207ENST00000490609 KRT28Q7Z3Y7 464 aa23.13■■□□□ 1.29
COL2A1-207ENST00000490609 ADGRB1O14514 1584 aa23.13■■□□□ 1.29
COL2A1-207ENST00000490609 GLI3P10071 1580 aa23.13■■□□□ 1.29
COL2A1-207ENST00000490609 ABCA3Q99758 1704 aa23.12■■□□□ 1.29
COL2A1-207ENST00000490609 DHX57Q6P158 1386 aaKnown RBP23.11■■□□□ 1.29
COL2A1-207ENST00000490609 DLC1Q96QB1 1528 aa23.1■■□□□ 1.29
COL2A1-207ENST00000490609 GJD4Q96KN9 370 aaPredicted RBP23.1■■□□□ 1.29
COL2A1-207ENST00000490609 PRAM1Q96QH2 718 aa23.1■■□□□ 1.29
COL2A1-207ENST00000490609 ATAD2Q6PL18 1390 aa23.1■■□□□ 1.29
COL2A1-207ENST00000490609 PHF8Q9UPP1 1060 aa23.09■■□□□ 1.29
COL2A1-207ENST00000490609 SAFB2Q14151 953 aaKnown RBP eCLIP23.08■■□□□ 1.29
COL2A1-207ENST00000490609 CABLES1Q8TDN4 633 aa23.07■■□□□ 1.28
COL2A1-207ENST00000490609 TRPM3Q9HCF6 1732 aaPredicted RBP23.07■■□□□ 1.28
COL2A1-207ENST00000490609 ACIN1Q9UKV3 1341 aaKnown RBP23.07■■□□□ 1.28
COL2A1-207ENST00000490609 ADGRB2O60241 1585 aa23.06■■□□□ 1.28
COL2A1-207ENST00000490609 RALGAPBQ86X10 1494 aa23.06■■□□□ 1.28
COL2A1-207ENST00000490609 UNC5CLQ8IV45 518 aa23.06■■□□□ 1.28
COL2A1-207ENST00000490609 TNS3Q68CZ2 1445 aa23.06■■□□□ 1.28
COL2A1-207ENST00000490609 PLCH1Q4KWH8 1693 aa23.06■■□□□ 1.28
COL2A1-207ENST00000490609 SBNO1A3KN83 1393 aa23.03■■□□□ 1.28
COL2A1-207ENST00000490609 NWD2Q9ULI1 1742 aa23.03■■□□□ 1.28
COL2A1-207ENST00000490609 ALS2Q96Q42 1657 aa23.02■■□□□ 1.28
COL2A1-207ENST00000490609 PRR36Q9H6K5 1346 aa23.02■■□□□ 1.28
COL2A1-207ENST00000490609 PMFBP1Q8TBY8 1022 aa23.01■■□□□ 1.27
COL2A1-207ENST00000490609 TRAK1Q9UPV9 953 aa23■■□□□ 1.27
COL2A1-207ENST00000490609 ANKARQ7Z5J8 1434 aa22.99■■□□□ 1.27
COL2A1-207ENST00000490609 PSME1Q06323 249 aa22.99■■□□□ 1.27
COL2A1-207ENST00000490609 HIRIP3Q9BW71 556 aaPredicted RBP22.99■■□□□ 1.27
COL2A1-207ENST00000490609 CRYBG1Q9Y4K1 1723 aa22.99■■□□□ 1.27
COL2A1-207ENST00000490609 FAM83GA6ND36 823 aa22.98■■□□□ 1.27
COL2A1-207ENST00000490609 NRAPQ86VF7 1730 aa22.98■■□□□ 1.27
COL2A1-207ENST00000490609 ONECUT3O60422 494 aaPredicted RBP22.97■■□□□ 1.27
COL2A1-207ENST00000490609 POGKQ9P215 609 aa22.97■■□□□ 1.27
COL2A1-207ENST00000490609 KDM2AQ9Y2K7 1162 aa22.97■■□□□ 1.27
COL2A1-207ENST00000490609 ARHGEF28Q8N1W1 1705 aaKnown RBP22.96■■□□□ 1.27
COL2A1-207ENST00000490609 PLEKHG5O94827 1062 aa22.96■■□□□ 1.27
COL2A1-207ENST00000490609 VPS72Q15906 364 aa22.96■■□□□ 1.27
COL2A1-207ENST00000490609 DCAF11Q8TEB1 546 aa22.96■■□□□ 1.27
COL2A1-207ENST00000490609 MINK1Q8N4C8 1332 aaPredicted RBP22.94■■□□□ 1.26
COL2A1-207ENST00000490609 CCDC125Q86Z20 511 aa22.94■■□□□ 1.26
COL2A1-207ENST00000490609 TULP4Q9NRJ4 1543 aa22.93■■□□□ 1.26
COL2A1-207ENST00000490609 ARHGEF10O15013 1369 aa22.93■■□□□ 1.26
COL2A1-207ENST00000490609 WASLO00401 505 aaPredicted RBP22.92■■□□□ 1.26
COL2A1-207ENST00000490609 HRCP23327 699 aa22.92■■□□□ 1.26
COL2A1-207ENST00000490609 SEPT12Q8IYM1 358 aa22.92■■□□□ 1.26
COL2A1-207ENST00000490609 LMOD2Q6P5Q4 547 aa22.91■■□□□ 1.26
COL2A1-207ENST00000490609 BLMP54132 1417 aaPredicted RBP22.88■■□□□ 1.25
COL2A1-207ENST00000490609 COL14A1Q05707 1796 aaKnown RBP22.88■■□□□ 1.25
COL2A1-207ENST00000490609 HAP1P54257 671 aaPredicted RBP22.87■■□□□ 1.25
COL2A1-207ENST00000490609 DEFB132Q7Z7B7 95 aa22.87■■□□□ 1.25
COL2A1-207ENST00000490609 ATP7BP35670 1465 aa22.86■■□□□ 1.25
COL2A1-207ENST00000490609 STAC3Q96MF2 364 aa22.86■■□□□ 1.25
COL2A1-207ENST00000490609 ZRANB1Q9UGI0 708 aa22.85■■□□□ 1.25
COL2A1-207ENST00000490609 ITSN1Q15811 1721 aa22.85■■□□□ 1.25
COL2A1-207ENST00000490609 BTG4Q9NY30 223 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms