RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 HIRIP3Q9BW71 556 aaPredicted RBP18.46■□□□□ 0.55
SNX12-205ENST00000490561 ADGRB2O60241 1585 aa18.45■□□□□ 0.54
SNX12-205ENST00000490561 SAFB2Q14151 953 aaKnown RBP eCLIP18.44■□□□□ 0.54
SNX12-205ENST00000490561 PROSER2Q86WR7 435 aaPredicted RBP18.44■□□□□ 0.54
SNX12-205ENST00000490561 MINK1Q8N4C8 1332 aaPredicted RBP18.43■□□□□ 0.54
SNX12-205ENST00000490561 ADGRL3Q9HAR2 1447 aa18.41■□□□□ 0.54
SNX12-205ENST00000490561 ZNF335Q9H4Z2 1342 aaPredicted RBP18.41■□□□□ 0.54
SNX12-205ENST00000490561 CCDC7Q96M83 1385 aa18.41■□□□□ 0.54
SNX12-205ENST00000490561 DISP3Q9P2K9 1392 aa18.41■□□□□ 0.54
SNX12-205ENST00000490561 STRCP1A6NGW2 1772 aa18.4■□□□□ 0.54
SNX12-205ENST00000490561 TULP4Q9NRJ4 1543 aa18.4■□□□□ 0.54
SNX12-205ENST00000490561 KIF7Q2M1P5 1343 aa18.4■□□□□ 0.54
SNX12-205ENST00000490561 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.4■□□□□ 0.54
SNX12-205ENST00000490561 WASLO00401 505 aaPredicted RBP18.39■□□□□ 0.53
SNX12-205ENST00000490561 TMEM94Q12767 1356 aa18.39■□□□□ 0.53
SNX12-205ENST00000490561 CDC42BPGQ6DT37 1551 aa18.38■□□□□ 0.53
SNX12-205ENST00000490561 C14orf37Q86TY3 774 aa18.38■□□□□ 0.53
SNX12-205ENST00000490561 WASHC2AQ641Q2 1341 aa18.38■□□□□ 0.53
SNX12-205ENST00000490561 ATAD2Q6PL18 1390 aa18.38■□□□□ 0.53
SNX12-205ENST00000490561 LRRC7Q96NW7 1537 aa18.38■□□□□ 0.53
SNX12-205ENST00000490561 SRPK2P78362 688 aaKnown RBP18.37■□□□□ 0.53
SNX12-205ENST00000490561 CDK19Q9BWU1 502 aa18.37■□□□□ 0.53
SNX12-205ENST00000490561 NINLQ9Y2I6 1382 aa18.37■□□□□ 0.53
SNX12-205ENST00000490561 DCCP43146 1447 aa18.37■□□□□ 0.53
SNX12-205ENST00000490561 C11orf95C9JLR9 678 aaPredicted RBP18.36■□□□□ 0.53
SNX12-205ENST00000490561 C19orf44Q9H6X5 657 aa18.36■□□□□ 0.53
SNX12-205ENST00000490561 NALCNQ8IZF0 1738 aa18.35■□□□□ 0.53
SNX12-205ENST00000490561 ANKARQ7Z5J8 1434 aa18.34■□□□□ 0.53
SNX12-205ENST00000490561 MSH6P52701 1360 aa18.34■□□□□ 0.53
SNX12-205ENST00000490561 POLR3GLQ9BT43 218 aa18.33■□□□□ 0.52
SNX12-205ENST00000490561 LTBP4Q8N2S1 1624 aa18.33■□□□□ 0.52
SNX12-205ENST00000490561 CABP2Q9NPB3 220 aa18.32■□□□□ 0.52
SNX12-205ENST00000490561 ATF3P18847 181 aa18.31■□□□□ 0.52
SNX12-205ENST00000490561 FMN2Q9NZ56 1722 aa18.31■□□□□ 0.52
SNX12-205ENST00000490561 CADPS2Q86UW7 1296 aa18.3■□□□□ 0.52
SNX12-205ENST00000490561 ATP7BP35670 1465 aa18.29■□□□□ 0.52
SNX12-205ENST00000490561 NUDT16Q96DE0 195 aaKnown RBP18.29■□□□□ 0.52
SNX12-205ENST00000490561 CCDC61Q9Y6R9 512 aa18.29■□□□□ 0.52
SNX12-205ENST00000490561 RBM33Q96EV2 1170 aaKnown RBP18.28■□□□□ 0.52
SNX12-205ENST00000490561 ITSN1Q15811 1721 aa18.27■□□□□ 0.52
SNX12-205ENST00000490561 XIRP1Q702N8 1843 aaKnown RBP18.27■□□□□ 0.52
SNX12-205ENST00000490561 TMC1Q8TDI8 760 aa18.26■□□□□ 0.51
SNX12-205ENST00000490561 IQSEC2Q5JU85 1478 aa18.26■□□□□ 0.51
SNX12-205ENST00000490561 MYOM1P52179 1685 aa18.25■□□□□ 0.51
SNX12-205ENST00000490561 PPIP5K1Q6PFW1 1433 aa18.25■□□□□ 0.51
SNX12-205ENST00000490561 TERF2IPQ9NYB0 399 aa18.25■□□□□ 0.51
SNX12-205ENST00000490561 TOPAZ1Q8N9V7 1692 aa18.25■□□□□ 0.51
SNX12-205ENST00000490561 PRR36Q9H6K5 1346 aa18.24■□□□□ 0.51
SNX12-205ENST00000490561 DDX10Q13206 875 aaKnown RBP18.24■□□□□ 0.51
SNX12-205ENST00000490561 ANKRD36BQ8N2N9 1353 aa18.23■□□□□ 0.51
SNX12-205ENST00000490561 PLEKHG3A1L390 1219 aa18.23■□□□□ 0.51
SNX12-205ENST00000490561 HDGFL2Q7Z4V5 671 aaPredicted RBP18.23■□□□□ 0.51
SNX12-205ENST00000490561 USP32Q8NFA0 1604 aa18.23■□□□□ 0.51
SNX12-205ENST00000490561 MST1RQ04912 1400 aa18.23■□□□□ 0.51
SNX12-205ENST00000490561 CABP1Q9NZU7 370 aa18.22■□□□□ 0.51
SNX12-205ENST00000490561 C1orf167Q5SNV9 1468 aa18.21■□□□□ 0.51
SNX12-205ENST00000490561 SLC12A5Q9H2X9 1139 aa18.21■□□□□ 0.51
SNX12-205ENST00000490561 NUTM2FA1L443 756 aa18.2■□□□□ 0.5
SNX12-205ENST00000490561 ZNF692Q9BU19 519 aaPredicted RBP18.2■□□□□ 0.5
SNX12-205ENST00000490561 PANK3Q9H999 370 aa18.2■□□□□ 0.5
SNX12-205ENST00000490561 KIF1AQ12756 1690 aa18.19■□□□□ 0.5
SNX12-205ENST00000490561 POLR3AO14802 1390 aaPredicted RBP18.18■□□□□ 0.5
SNX12-205ENST00000490561 CPSF1Q10570 1443 aaKnown RBP18.18■□□□□ 0.5
SNX12-205ENST00000490561 PHF8Q9UPP1 1060 aa18.18■□□□□ 0.5
SNX12-205ENST00000490561 BRD4O60885 1362 aaPredicted RBP18.17■□□□□ 0.5
SNX12-205ENST00000490561 ESCO1Q5FWF5 840 aa18.17■□□□□ 0.5
SNX12-205ENST00000490561 A0A1W2PP64 1363 aa18.17■□□□□ 0.5
SNX12-205ENST00000490561 CD163L1Q9NR16 1453 aa18.16■□□□□ 0.5
SNX12-205ENST00000490561 NGDNQ8NEJ9 315 aaKnown RBP18.16■□□□□ 0.5
SNX12-205ENST00000490561 SLAIN2Q9P270 581 aa18.16■□□□□ 0.5
SNX12-205ENST00000490561 KNSTRNQ9Y448 316 aa18.16■□□□□ 0.5
SNX12-205ENST00000490561 DIEXFQ68CQ4 756 aaKnown RBP18.15■□□□□ 0.5
SNX12-205ENST00000490561 ACEP12821 1306 aa18.15■□□□□ 0.5
SNX12-205ENST00000490561 KTN1Q86UP2 1357 aaKnown RBP18.15■□□□□ 0.5
SNX12-205ENST00000490561 RGPD8O14715 1765 aaPredicted RBP18.14■□□□□ 0.49
SNX12-205ENST00000490561 AKAP12Q02952 1782 aa18.14■□□□□ 0.49
SNX12-205ENST00000490561 EDC4Q6P2E9 1401 aaKnown RBP18.14■□□□□ 0.49
SNX12-205ENST00000490561 TOM1O60784 492 aa18.13■□□□□ 0.49
SNX12-205ENST00000490561 PMFBP1Q8TBY8 1022 aa18.13■□□□□ 0.49
SNX12-205ENST00000490561 CERKQ8TCT0 537 aa18.13■□□□□ 0.49
SNX12-205ENST00000490561 NSD3Q9BZ95 1437 aa18.13■□□□□ 0.49
SNX12-205ENST00000490561 PER1O15534 1290 aaPredicted RBP18.12■□□□□ 0.49
SNX12-205ENST00000490561 CGNL1Q0VF96 1302 aa18.12■□□□□ 0.49
SNX12-205ENST00000490561 NPC1L1Q9UHC9 1359 aa18.12■□□□□ 0.49
SNX12-205ENST00000490561 MON2Q7Z3U7 1717 aa18.12■□□□□ 0.49
SNX12-205ENST00000490561 ORAI2Q96SN7 254 aa18.11■□□□□ 0.49
SNX12-205ENST00000490561 NSD2O96028 1365 aa18.11■□□□□ 0.49
SNX12-205ENST00000490561 USP6P35125 1406 aa18.11■□□□□ 0.49
SNX12-205ENST00000490561 NPHP3Q7Z494 1330 aa18.1■□□□□ 0.49
SNX12-205ENST00000490561 CARD14Q9BXL6 1004 aa18.1■□□□□ 0.49
SNX12-205ENST00000490561 TTC21AQ8NDW8 1320 aa18.09■□□□□ 0.49
SNX12-205ENST00000490561 PSME1Q06323 249 aa18.09■□□□□ 0.49
SNX12-205ENST00000490561 BRINP3Q76B58 766 aa18.09■□□□□ 0.49
SNX12-205ENST00000490561 ANP32CO43423 234 aa18.07■□□□□ 0.48
SNX12-205ENST00000490561 NRKQ7Z2Y5 1582 aa18.07■□□□□ 0.48
SNX12-205ENST00000490561 SSH2Q76I76 1423 aa18.06■□□□□ 0.48
SNX12-205ENST00000490561 TTC21BQ7Z4L5 1316 aa18.06■□□□□ 0.48
SNX12-205ENST00000490561 AMER1Q5JTC6 1135 aaPredicted RBP18.06■□□□□ 0.48
SNX12-205ENST00000490561 UBAP1LF5GYI3 381 aa18.05■□□□□ 0.48
SNX12-205ENST00000490561 FOXO3O43524 673 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 1797.7 ms