RNA–Protein interactions for RNA: ENST00000490554.5

LMNB2-203, Transcript of lamin B2, humanhuman

TSL 2

Gene LMNB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-203ENST00000490554 NPHP3Q7Z494 1330 aa23.33■■□□□ 1.33
LMNB2-203ENST00000490554 ESCO1Q5FWF5 840 aa23.33■■□□□ 1.33
LMNB2-203ENST00000490554 MYOM2P54296 1465 aa23.32■■□□□ 1.32
LMNB2-203ENST00000490554 COL22A1Q8NFW1 1626 aaPredicted RBP23.32■■□□□ 1.32
LMNB2-203ENST00000490554 ATRNO75882 1429 aa23.32■■□□□ 1.32
LMNB2-203ENST00000490554 ADGRF5Q8IZF2 1346 aa23.32■■□□□ 1.32
LMNB2-203ENST00000490554 CDC42BPGQ6DT37 1551 aa23.31■■□□□ 1.32
LMNB2-203ENST00000490554 ATAD2Q6PL18 1390 aa23.31■■□□□ 1.32
LMNB2-203ENST00000490554 FOXD1Q16676 465 aa23.31■■□□□ 1.32
LMNB2-203ENST00000490554 PXDNQ92626 1479 aa23.3■■□□□ 1.32
LMNB2-203ENST00000490554 TECPR2O15040 1411 aa23.28■■□□□ 1.32
LMNB2-203ENST00000490554 FOXO3O43524 673 aa23.28■■□□□ 1.32
LMNB2-203ENST00000490554 WAPLQ7Z5K2 1190 aa23.27■■□□□ 1.32
LMNB2-203ENST00000490554 XPCQ01831 940 aaPredicted RBP23.26■■□□□ 1.31
LMNB2-203ENST00000490554 STK26Q9P289 416 aa23.26■■□□□ 1.31
LMNB2-203ENST00000490554 LRPPRCP42704 1394 aaKnown RBP23.26■■□□□ 1.31
LMNB2-203ENST00000490554 CCDC144AA2RUR9 1427 aa23.25■■□□□ 1.31
LMNB2-203ENST00000490554 SPATA31E1Q6ZUB1 1445 aa23.25■■□□□ 1.31
LMNB2-203ENST00000490554 BCL9LQ86UU0 1499 aa23.25■■□□□ 1.31
LMNB2-203ENST00000490554 RGL3Q3MIN7 710 aa23.25■■□□□ 1.31
LMNB2-203ENST00000490554 ABCC11Q96J66 1382 aa23.25■■□□□ 1.31
LMNB2-203ENST00000490554 ANKRD30BQ9BXX2 1392 aa23.25■■□□□ 1.31
LMNB2-203ENST00000490554 NUTM2FA1L443 756 aa23.23■■□□□ 1.31
LMNB2-203ENST00000490554 PLEKHH1Q9ULM0 1364 aa23.22■■□□□ 1.31
LMNB2-203ENST00000490554 TMEM132EQ6IEE7 984 aa23.21■■□□□ 1.31
LMNB2-203ENST00000490554 GJD4Q96KN9 370 aaPredicted RBP23.2■■□□□ 1.3
LMNB2-203ENST00000490554 MPHOSPH9Q99550 1183 aa23.19■■□□□ 1.3
LMNB2-203ENST00000490554 PIK3C2GO75747 1445 aa23.18■■□□□ 1.3
LMNB2-203ENST00000490554 SPATA31A3Q5VYP0 1347 aa23.17■■□□□ 1.3
LMNB2-203ENST00000490554 CCDC125Q86Z20 511 aa23.16■■□□□ 1.3
LMNB2-203ENST00000490554 SRCAPQ6ZRS2 3230 aa23.16■■□□□ 1.3
LMNB2-203ENST00000490554 YTHDC2Q9H6S0 1430 aaKnown RBP23.16■■□□□ 1.3
LMNB2-203ENST00000490554 SIRT1Q96EB6 747 aa23.15■■□□□ 1.3
LMNB2-203ENST00000490554 KNDC1Q76NI1 1749 aa23.15■■□□□ 1.3
LMNB2-203ENST00000490554 IFT172Q9UG01 1749 aa23.15■■□□□ 1.3
LMNB2-203ENST00000490554 MARF1Q9Y4F3 1742 aaKnown RBP23.15■■□□□ 1.3
LMNB2-203ENST00000490554 UNC5CLQ8IV45 518 aa23.14■■□□□ 1.29
LMNB2-203ENST00000490554 SLIT2O94813 1529 aa23.13■■□□□ 1.29
LMNB2-203ENST00000490554 KRT28Q7Z3Y7 464 aa23.13■■□□□ 1.29
LMNB2-203ENST00000490554 ZRANB1Q9UGI0 708 aa23.13■■□□□ 1.29
LMNB2-203ENST00000490554 EP400Q96L91 3159 aa23.12■■□□□ 1.29
LMNB2-203ENST00000490554 FMN2Q9NZ56 1722 aa23.12■■□□□ 1.29
LMNB2-203ENST00000490554 C14orf93Q9H972 538 aaKnown RBP23.11■■□□□ 1.29
LMNB2-203ENST00000490554 RALGAPBQ86X10 1494 aa23.11■■□□□ 1.29
LMNB2-203ENST00000490554 KIF1AQ12756 1690 aa23.1■■□□□ 1.29
LMNB2-203ENST00000490554 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.1■■□□□ 1.29
LMNB2-203ENST00000490554 PHF8Q9UPP1 1060 aa23.08■■□□□ 1.29
LMNB2-203ENST00000490554 GLI3P10071 1580 aa23.08■■□□□ 1.29
LMNB2-203ENST00000490554 TNS3Q68CZ2 1445 aa23.07■■□□□ 1.28
LMNB2-203ENST00000490554 NRXN1Q9ULB1 1477 aa23.06■■□□□ 1.28
LMNB2-203ENST00000490554 DHX57Q6P158 1386 aaKnown RBP23.06■■□□□ 1.28
LMNB2-203ENST00000490554 PSME1Q06323 249 aa23.06■■□□□ 1.28
LMNB2-203ENST00000490554 CFAP70Q5T0N1 1121 aa23.06■■□□□ 1.28
LMNB2-203ENST00000490554 USP32Q8NFA0 1604 aa23.06■■□□□ 1.28
LMNB2-203ENST00000490554 CABLES1Q8TDN4 633 aa23.04■■□□□ 1.28
LMNB2-203ENST00000490554 SBNO1A3KN83 1393 aa23.03■■□□□ 1.28
LMNB2-203ENST00000490554 BLMP54132 1417 aaPredicted RBP23.03■■□□□ 1.28
LMNB2-203ENST00000490554 HAP1P54257 671 aaPredicted RBP23.03■■□□□ 1.28
LMNB2-203ENST00000490554 VPS72Q15906 364 aa23.03■■□□□ 1.28
LMNB2-203ENST00000490554 PRAM1Q96QH2 718 aa23.03■■□□□ 1.28
LMNB2-203ENST00000490554 SEPT12Q8IYM1 358 aa23.02■■□□□ 1.28
LMNB2-203ENST00000490554 SAFB2Q14151 953 aaKnown RBP eCLIP23.01■■□□□ 1.27
LMNB2-203ENST00000490554 ACIN1Q9UKV3 1341 aaKnown RBP23.01■■□□□ 1.27
LMNB2-203ENST00000490554 ARHGEF10O15013 1369 aa23■■□□□ 1.27
LMNB2-203ENST00000490554 ONECUT3O60422 494 aaPredicted RBP22.99■■□□□ 1.27
LMNB2-203ENST00000490554 PLEKHG5O94827 1062 aa22.98■■□□□ 1.27
LMNB2-203ENST00000490554 LMOD2Q6P5Q4 547 aa22.98■■□□□ 1.27
LMNB2-203ENST00000490554 RGPD8O14715 1765 aaPredicted RBP22.98■■□□□ 1.27
LMNB2-203ENST00000490554 DEFB132Q7Z7B7 95 aa22.97■■□□□ 1.27
LMNB2-203ENST00000490554 ANKARQ7Z5J8 1434 aa22.97■■□□□ 1.27
LMNB2-203ENST00000490554 DLC1Q96QB1 1528 aa22.97■■□□□ 1.27
LMNB2-203ENST00000490554 FAM83GA6ND36 823 aa22.96■■□□□ 1.27
LMNB2-203ENST00000490554 PMFBP1Q8TBY8 1022 aa22.96■■□□□ 1.27
LMNB2-203ENST00000490554 POGKQ9P215 609 aa22.96■■□□□ 1.27
LMNB2-203ENST00000490554 CCDC9Q9Y3X0 531 aaKnown RBP22.95■■□□□ 1.26
LMNB2-203ENST00000490554 BRWD3Q6RI45 1802 aa22.94■■□□□ 1.26
LMNB2-203ENST00000490554 KRT27Q7Z3Y8 459 aa22.94■■□□□ 1.26
LMNB2-203ENST00000490554 NWD2Q9ULI1 1742 aa22.94■■□□□ 1.26
LMNB2-203ENST00000490554 PLCH1Q4KWH8 1693 aa22.93■■□□□ 1.26
LMNB2-203ENST00000490554 SF3B2Q13435 895 aaKnown RBP22.93■■□□□ 1.26
LMNB2-203ENST00000490554 ABCA3Q99758 1704 aa22.92■■□□□ 1.26
LMNB2-203ENST00000490554 ADGRB1O14514 1584 aa22.91■■□□□ 1.26
LMNB2-203ENST00000490554 ADGRB2O60241 1585 aa22.91■■□□□ 1.26
LMNB2-203ENST00000490554 HIRIP3Q9BW71 556 aaPredicted RBP22.89■■□□□ 1.25
LMNB2-203ENST00000490554 TRAK1Q9UPV9 953 aa22.89■■□□□ 1.25
LMNB2-203ENST00000490554 PRR36Q9H6K5 1346 aa22.88■■□□□ 1.25
LMNB2-203ENST00000490554 GPRASP1Q5JY77 1395 aa22.88■■□□□ 1.25
LMNB2-203ENST00000490554 BTG4Q9NY30 223 aa22.87■■□□□ 1.25
LMNB2-203ENST00000490554 MINK1Q8N4C8 1332 aaPredicted RBP22.86■■□□□ 1.25
LMNB2-203ENST00000490554 TRPM3Q9HCF6 1732 aaPredicted RBP22.86■■□□□ 1.25
LMNB2-203ENST00000490554 EIF3AQ14152 1382 aaKnown RBP22.86■■□□□ 1.25
LMNB2-203ENST00000490554 A0A0G2JS52 829 aa22.85■■□□□ 1.25
LMNB2-203ENST00000490554 MYT1Q01538 1121 aa22.85■■□□□ 1.25
LMNB2-203ENST00000490554 FAM98CQ17RN3 349 aaKnown RBP22.85■■□□□ 1.25
LMNB2-203ENST00000490554 RAB3GAP2Q9H2M9 1393 aa22.85■■□□□ 1.25
LMNB2-203ENST00000490554 WASLO00401 505 aaPredicted RBP22.84■■□□□ 1.25
LMNB2-203ENST00000490554 TULP4Q9NRJ4 1543 aa22.83■■□□□ 1.25
LMNB2-203ENST00000490554 NRAPQ86VF7 1730 aa22.83■■□□□ 1.25
LMNB2-203ENST00000490554 ALS2Q96Q42 1657 aa22.82■■□□□ 1.24
LMNB2-203ENST00000490554 BAG6P46379 1132 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms