RNA–Protein interactions for RNA: ENST00000490471.1

CDCP1-203, Transcript of CUB domain containing protein 1, humanhuman

TSL 4

Gene CDCP1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-203ENST00000490471 C1orf167Q5SNV9 1468 aa16.67■□□□□ 0.26
CDCP1-203ENST00000490471 NHSL1Q5SYE7 1610 aa16.67■□□□□ 0.26
CDCP1-203ENST00000490471 ROBO2Q9HCK4 1378 aa16.67■□□□□ 0.26
CDCP1-203ENST00000490471 STK26Q9P289 416 aa16.67■□□□□ 0.26
CDCP1-203ENST00000490471 NALCNQ8IZF0 1738 aa16.67■□□□□ 0.26
CDCP1-203ENST00000490471 ESCO1Q5FWF5 840 aa16.66■□□□□ 0.26
CDCP1-203ENST00000490471 STAC3Q96MF2 364 aa16.66■□□□□ 0.26
CDCP1-203ENST00000490471 NPHP3Q7Z494 1330 aa16.66■□□□□ 0.26
CDCP1-203ENST00000490471 ADGRF5Q8IZF2 1346 aa16.66■□□□□ 0.26
CDCP1-203ENST00000490471 SIRT1Q96EB6 747 aa16.65■□□□□ 0.26
CDCP1-203ENST00000490471 DHX57Q6P158 1386 aaKnown RBP16.64■□□□□ 0.26
CDCP1-203ENST00000490471 NGLY1Q96IV0 654 aa16.64■□□□□ 0.25
CDCP1-203ENST00000490471 SETD1AO15047 1707 aaKnown RBP16.64■□□□□ 0.25
CDCP1-203ENST00000490471 ABCC11Q96J66 1382 aa16.64■□□□□ 0.25
CDCP1-203ENST00000490471 SPATA31E1Q6ZUB1 1445 aa16.63■□□□□ 0.25
CDCP1-203ENST00000490471 HRCP23327 699 aa16.62■□□□□ 0.25
CDCP1-203ENST00000490471 C8orf37Q96NL8 207 aa16.62■□□□□ 0.25
CDCP1-203ENST00000490471 ORAI2Q96SN7 254 aa16.62■□□□□ 0.25
CDCP1-203ENST00000490471 AFF2P51816 1311 aa16.62■□□□□ 0.25
CDCP1-203ENST00000490471 SOS2Q07890 1332 aaPredicted RBP16.62■□□□□ 0.25
CDCP1-203ENST00000490471 LRP6O75581 1613 aa16.62■□□□□ 0.25
CDCP1-203ENST00000490471 C14orf93Q9H972 538 aaKnown RBP16.61■□□□□ 0.25
CDCP1-203ENST00000490471 PNPLA6Q8IY17 1366 aa16.61■□□□□ 0.25
CDCP1-203ENST00000490471 TECPR2O15040 1411 aa16.6■□□□□ 0.25
CDCP1-203ENST00000490471 CDC42BPGQ6DT37 1551 aa16.6■□□□□ 0.25
CDCP1-203ENST00000490471 IFT172Q9UG01 1749 aa16.59■□□□□ 0.25
CDCP1-203ENST00000490471 RBM6P78332 1123 aaKnown RBP16.59■□□□□ 0.25
CDCP1-203ENST00000490471 TMEM132EQ6IEE7 984 aa16.59■□□□□ 0.25
CDCP1-203ENST00000490471 DDX17Q92841 729 aaKnown RBP16.59■□□□□ 0.25
CDCP1-203ENST00000490471 QTRT2Q9H974 415 aaKnown RBP16.59■□□□□ 0.25
CDCP1-203ENST00000490471 RAB3GAP2Q9H2M9 1393 aa16.59■□□□□ 0.25
CDCP1-203ENST00000490471 PIK3C2GO75747 1445 aa16.59■□□□□ 0.25
CDCP1-203ENST00000490471 LAMC1P11047 1609 aa16.59■□□□□ 0.25
CDCP1-203ENST00000490471 ADAMTS2O95450 1211 aa16.58■□□□□ 0.24
CDCP1-203ENST00000490471 PSME1Q06323 249 aa16.58■□□□□ 0.24
CDCP1-203ENST00000490471 WAPLQ7Z5K2 1190 aa16.58■□□□□ 0.24
CDCP1-203ENST00000490471 POGKQ9P215 609 aa16.58■□□□□ 0.24
CDCP1-203ENST00000490471 U3KPZ7 1027 aaPredicted RBP16.58■□□□□ 0.24
CDCP1-203ENST00000490471 YTHDC2Q9H6S0 1430 aaKnown RBP16.58■□□□□ 0.24
CDCP1-203ENST00000490471 CDK12Q9NYV4 1490 aaPredicted RBP16.58■□□□□ 0.24
CDCP1-203ENST00000490471 KNDC1Q76NI1 1749 aa16.56■□□□□ 0.24
CDCP1-203ENST00000490471 MYOM2P54296 1465 aa16.56■□□□□ 0.24
CDCP1-203ENST00000490471 FOXO3O43524 673 aa16.56■□□□□ 0.24
CDCP1-203ENST00000490471 USP21Q9UK80 565 aa16.55■□□□□ 0.24
CDCP1-203ENST00000490471 TRPC5Q9UL62 973 aaPredicted RBP16.55■□□□□ 0.24
CDCP1-203ENST00000490471 HAP1P54257 671 aaPredicted RBP16.54■□□□□ 0.24
CDCP1-203ENST00000490471 CFAP70Q5T0N1 1121 aa16.54■□□□□ 0.24
CDCP1-203ENST00000490471 EIF3AQ14152 1382 aaKnown RBP16.53■□□□□ 0.24
CDCP1-203ENST00000490471 NUTM2FA1L443 756 aa16.53■□□□□ 0.24
CDCP1-203ENST00000490471 DCAF11Q8TEB1 546 aa16.52■□□□□ 0.24
CDCP1-203ENST00000490471 KIF1AQ12756 1690 aa16.52■□□□□ 0.23
CDCP1-203ENST00000490471 KDM2AQ9Y2K7 1162 aa16.51■□□□□ 0.23
CDCP1-203ENST00000490471 KRT28Q7Z3Y7 464 aa16.5■□□□□ 0.23
CDCP1-203ENST00000490471 FNBP4Q8N3X1 1017 aaPredicted RBP16.5■□□□□ 0.23
CDCP1-203ENST00000490471 PRAM1Q96QH2 718 aa16.5■□□□□ 0.23
CDCP1-203ENST00000490471 PHF8Q9UPP1 1060 aa16.5■□□□□ 0.23
CDCP1-203ENST00000490471 NRXN1Q9ULB1 1477 aa16.49■□□□□ 0.23
CDCP1-203ENST00000490471 UPF1Q92900 1129 aaKnown RBP eCLIP16.49■□□□□ 0.23
CDCP1-203ENST00000490471 COL22A1Q8NFW1 1626 aaPredicted RBP16.48■□□□□ 0.23
CDCP1-203ENST00000490471 SLC4A2P04920 1241 aa16.48■□□□□ 0.23
CDCP1-203ENST00000490471 FMN2Q9NZ56 1722 aa16.48■□□□□ 0.23
CDCP1-203ENST00000490471 DLC1Q96QB1 1528 aa16.47■□□□□ 0.23
CDCP1-203ENST00000490471 XPCQ01831 940 aaPredicted RBP16.47■□□□□ 0.23
CDCP1-203ENST00000490471 PLEKHH1Q9ULM0 1364 aa16.47■□□□□ 0.23
CDCP1-203ENST00000490471 SPATA31A3Q5VYP0 1347 aa16.46■□□□□ 0.23
CDCP1-203ENST00000490471 SAFB2Q14151 953 aaKnown RBP eCLIP16.46■□□□□ 0.23
CDCP1-203ENST00000490471 TRAK1Q9UPV9 953 aa16.46■□□□□ 0.23
CDCP1-203ENST00000490471 PXDNQ92626 1479 aa16.46■□□□□ 0.23
CDCP1-203ENST00000490471 LMOD2Q6P5Q4 547 aa16.45■□□□□ 0.22
CDCP1-203ENST00000490471 GPRASP1Q5JY77 1395 aa16.45■□□□□ 0.22
CDCP1-203ENST00000490471 ANKARQ7Z5J8 1434 aa16.45■□□□□ 0.22
CDCP1-203ENST00000490471 ARHGEF10O15013 1369 aa16.44■□□□□ 0.22
CDCP1-203ENST00000490471 ATAD2Q6PL18 1390 aa16.44■□□□□ 0.22
CDCP1-203ENST00000490471 SBNO1A3KN83 1393 aa16.43■□□□□ 0.22
CDCP1-203ENST00000490471 CCDC125Q86Z20 511 aa16.42■□□□□ 0.22
CDCP1-203ENST00000490471 UNC5CLQ8IV45 518 aa16.41■□□□□ 0.22
CDCP1-203ENST00000490471 GJD4Q96KN9 370 aaPredicted RBP16.41■□□□□ 0.22
CDCP1-203ENST00000490471 MARF1Q9Y4F3 1742 aaKnown RBP16.41■□□□□ 0.22
CDCP1-203ENST00000490471 RGS12O14924 1447 aa16.4■□□□□ 0.22
CDCP1-203ENST00000490471 TNS3Q68CZ2 1445 aa16.4■□□□□ 0.22
CDCP1-203ENST00000490471 NGDNQ8NEJ9 315 aaKnown RBP16.4■□□□□ 0.22
CDCP1-203ENST00000490471 MINK1Q8N4C8 1332 aaPredicted RBP16.4■□□□□ 0.22
CDCP1-203ENST00000490471 ATRNO75882 1429 aa16.39■□□□□ 0.21
CDCP1-203ENST00000490471 WASLO00401 505 aaPredicted RBP16.39■□□□□ 0.21
CDCP1-203ENST00000490471 PMFBP1Q8TBY8 1022 aa16.38■□□□□ 0.21
CDCP1-203ENST00000490471 CCDC9Q9Y3X0 531 aaKnown RBP16.38■□□□□ 0.21
CDCP1-203ENST00000490471 RGPD8O14715 1765 aaPredicted RBP16.37■□□□□ 0.21
CDCP1-203ENST00000490471 ADGRB2O60241 1585 aa16.37■□□□□ 0.21
CDCP1-203ENST00000490471 HIRIP3Q9BW71 556 aaPredicted RBP16.36■□□□□ 0.21
CDCP1-203ENST00000490471 ADGRB1O14514 1584 aa16.35■□□□□ 0.21
CDCP1-203ENST00000490471 BCL9LQ86UU0 1499 aa16.35■□□□□ 0.21
CDCP1-203ENST00000490471 PAK3O75914 559 aaPredicted RBP16.34■□□□□ 0.21
CDCP1-203ENST00000490471 SF3B2Q13435 895 aaKnown RBP16.34■□□□□ 0.21
CDCP1-203ENST00000490471 TULP4Q9NRJ4 1543 aa16.34■□□□□ 0.21
CDCP1-203ENST00000490471 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.33■□□□□ 0.21
CDCP1-203ENST00000490471 USP32Q8NFA0 1604 aa16.33■□□□□ 0.2
CDCP1-203ENST00000490471 SLIT2O94813 1529 aa16.32■□□□□ 0.2
CDCP1-203ENST00000490471 PLEKHG5O94827 1062 aa16.32■□□□□ 0.2
CDCP1-203ENST00000490471 VPS72Q15906 364 aa16.32■□□□□ 0.2
CDCP1-203ENST00000490471 KIAA1210Q9ULL0 1709 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms