RNA–Protein interactions for RNA: ENST00000490417.6

SFXN4-208, Transcript of sideroflexin 4, humanhuman

TSL 2

Gene SFXN4, Length 952 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN4-208ENST00000490417 MYOM2P54296 1465 aa19.74■□□□□ 0.75
SFXN4-208ENST00000490417 C14orf93Q9H972 538 aaKnown RBP19.74■□□□□ 0.75
SFXN4-208ENST00000490417 DHX57Q6P158 1386 aaKnown RBP19.73■□□□□ 0.75
SFXN4-208ENST00000490417 DCAF11Q8TEB1 546 aa19.73■□□□□ 0.75
SFXN4-208ENST00000490417 STK26Q9P289 416 aa19.73■□□□□ 0.75
SFXN4-208ENST00000490417 LRPPRCP42704 1394 aaKnown RBP19.72■□□□□ 0.75
SFXN4-208ENST00000490417 ABCC11Q96J66 1382 aa19.72■□□□□ 0.75
SFXN4-208ENST00000490417 ROBO2Q9HCK4 1378 aa19.72■□□□□ 0.75
SFXN4-208ENST00000490417 IFT172Q9UG01 1749 aa19.72■□□□□ 0.75
SFXN4-208ENST00000490417 SIRT1Q96EB6 747 aa19.71■□□□□ 0.75
SFXN4-208ENST00000490417 TMEM132EQ6IEE7 984 aa19.7■□□□□ 0.74
SFXN4-208ENST00000490417 KDM2AQ9Y2K7 1162 aa19.7■□□□□ 0.74
SFXN4-208ENST00000490417 SETD1AO15047 1707 aaKnown RBP19.7■□□□□ 0.74
SFXN4-208ENST00000490417 BRINP3Q76B58 766 aa19.69■□□□□ 0.74
SFXN4-208ENST00000490417 JCADQ9P266 1359 aa19.69■□□□□ 0.74
SFXN4-208ENST00000490417 TECPR2O15040 1411 aa19.68■□□□□ 0.74
SFXN4-208ENST00000490417 NRXN1Q9ULB1 1477 aa19.68■□□□□ 0.74
SFXN4-208ENST00000490417 CFAP70Q5T0N1 1121 aa19.68■□□□□ 0.74
SFXN4-208ENST00000490417 YTHDC2Q9H6S0 1430 aaKnown RBP19.68■□□□□ 0.74
SFXN4-208ENST00000490417 LAMC1P11047 1609 aa19.67■□□□□ 0.74
SFXN4-208ENST00000490417 TRIM26Q12899 539 aaPredicted RBP19.67■□□□□ 0.74
SFXN4-208ENST00000490417 MST1RQ04912 1400 aa19.67■□□□□ 0.74
SFXN4-208ENST00000490417 MED1Q15648 1581 aaPredicted RBP19.66■□□□□ 0.74
SFXN4-208ENST00000490417 PHLPP1O60346 1717 aa19.66■□□□□ 0.74
SFXN4-208ENST00000490417 FKBP8Q14318 412 aa19.64■□□□□ 0.73
SFXN4-208ENST00000490417 LRRC59Q96AG4 307 aaKnown RBP19.64■□□□□ 0.73
SFXN4-208ENST00000490417 POGKQ9P215 609 aa19.64■□□□□ 0.73
SFXN4-208ENST00000490417 SPATA31A6Q5VVP1 1343 aa19.63■□□□□ 0.73
SFXN4-208ENST00000490417 WAPLQ7Z5K2 1190 aa19.63■□□□□ 0.73
SFXN4-208ENST00000490417 AHDC1Q5TGY3 1603 aaPredicted RBP19.62■□□□□ 0.73
SFXN4-208ENST00000490417 C1orf167Q5SNV9 1468 aa19.62■□□□□ 0.73
SFXN4-208ENST00000490417 NALCNQ8IZF0 1738 aa19.62■□□□□ 0.73
SFXN4-208ENST00000490417 ASXL1Q8IXJ9 1541 aa19.61■□□□□ 0.73
SFXN4-208ENST00000490417 ESCO1Q5FWF5 840 aa19.6■□□□□ 0.73
SFXN4-208ENST00000490417 KNDC1Q76NI1 1749 aa19.59■□□□□ 0.73
SFXN4-208ENST00000490417 CDC42BPGQ6DT37 1551 aa19.58■□□□□ 0.73
SFXN4-208ENST00000490417 MEX3CQ5U5Q3 659 aaKnown RBP19.58■□□□□ 0.72
SFXN4-208ENST00000490417 PRAM1Q96QH2 718 aa19.58■□□□□ 0.72
SFXN4-208ENST00000490417 COL16A1Q07092 1604 aaPredicted RBP19.57■□□□□ 0.72
SFXN4-208ENST00000490417 NPHP3Q7Z494 1330 aa19.56■□□□□ 0.72
SFXN4-208ENST00000490417 ORAI2Q96SN7 254 aa19.56■□□□□ 0.72
SFXN4-208ENST00000490417 TRAK1Q9UPV9 953 aa19.56■□□□□ 0.72
SFXN4-208ENST00000490417 DLC1Q96QB1 1528 aa19.55■□□□□ 0.72
SFXN4-208ENST00000490417 ILDR2Q71H61 639 aa19.54■□□□□ 0.72
SFXN4-208ENST00000490417 PLEKHH1Q9ULM0 1364 aa19.54■□□□□ 0.72
SFXN4-208ENST00000490417 SAFB2Q14151 953 aaKnown RBP eCLIP19.53■□□□□ 0.72
SFXN4-208ENST00000490417 EIF3AQ14152 1382 aaKnown RBP19.53■□□□□ 0.72
SFXN4-208ENST00000490417 NEUROD1Q13562 356 aa19.52■□□□□ 0.72
SFXN4-208ENST00000490417 NUTM2FA1L443 756 aa19.51■□□□□ 0.71
SFXN4-208ENST00000490417 SOCS7O14512 581 aa19.51■□□□□ 0.71
SFXN4-208ENST00000490417 NHSL1Q5SYE7 1610 aa19.51■□□□□ 0.71
SFXN4-208ENST00000490417 SOS2Q07890 1332 aaPredicted RBP19.51■□□□□ 0.71
SFXN4-208ENST00000490417 ADGRB1O14514 1584 aa19.5■□□□□ 0.71
SFXN4-208ENST00000490417 SHPRHQ149N8 1683 aa19.49■□□□□ 0.71
SFXN4-208ENST00000490417 FOXO3O43524 673 aa19.49■□□□□ 0.71
SFXN4-208ENST00000490417 ZNF772Q68DY9 489 aaPredicted RBP19.49■□□□□ 0.71
SFXN4-208ENST00000490417 DDX17Q92841 729 aaKnown RBP19.49■□□□□ 0.71
SFXN4-208ENST00000490417 NUTM2BA6NNL0 878 aaPredicted RBP19.48■□□□□ 0.71
SFXN4-208ENST00000490417 NUTM2EB1AL46 878 aaPredicted RBP19.48■□□□□ 0.71
SFXN4-208ENST00000490417 PSME1Q06323 249 aa19.48■□□□□ 0.71
SFXN4-208ENST00000490417 NUTM2AQ8IVF1 878 aaPredicted RBP19.48■□□□□ 0.71
SFXN4-208ENST00000490417 L3MBTL2Q969R5 705 aa19.48■□□□□ 0.71
SFXN4-208ENST00000490417 SIN3AQ96ST3 1273 aa19.47■□□□□ 0.71
SFXN4-208ENST00000490417 SPDYE4A6NLX3 237 aa19.46■□□□□ 0.71
SFXN4-208ENST00000490417 PHF8Q9UPP1 1060 aa19.46■□□□□ 0.71
SFXN4-208ENST00000490417 MINK1Q8N4C8 1332 aaPredicted RBP19.45■□□□□ 0.7
SFXN4-208ENST00000490417 KIAA1210Q9ULL0 1709 aa19.45■□□□□ 0.7
SFXN4-208ENST00000490417 ANKARQ7Z5J8 1434 aa19.44■□□□□ 0.7
SFXN4-208ENST00000490417 WASLO00401 505 aaPredicted RBP19.44■□□□□ 0.7
SFXN4-208ENST00000490417 HIRIP3Q9BW71 556 aaPredicted RBP19.44■□□□□ 0.7
SFXN4-208ENST00000490417 PNPLA6Q8IY17 1366 aa19.44■□□□□ 0.7
SFXN4-208ENST00000490417 FMN2Q9NZ56 1722 aa19.42■□□□□ 0.7
SFXN4-208ENST00000490417 RGS17Q9UGC6 210 aaPredicted RBP19.42■□□□□ 0.7
SFXN4-208ENST00000490417 KIF1AQ12756 1690 aa19.42■□□□□ 0.7
SFXN4-208ENST00000490417 KRT28Q7Z3Y7 464 aa19.41■□□□□ 0.7
SFXN4-208ENST00000490417 TONSLQ96HA7 1378 aa19.41■□□□□ 0.7
SFXN4-208ENST00000490417 ADGRB2O60241 1585 aa19.4■□□□□ 0.7
SFXN4-208ENST00000490417 XPCQ01831 940 aaPredicted RBP19.39■□□□□ 0.69
SFXN4-208ENST00000490417 NBPF1Q3BBV0 1214 aa19.39■□□□□ 0.69
SFXN4-208ENST00000490417 GPRASP1Q5JY77 1395 aa19.39■□□□□ 0.69
SFXN4-208ENST00000490417 LRP6O75581 1613 aa19.38■□□□□ 0.69
SFXN4-208ENST00000490417 NGLY1Q96IV0 654 aa19.38■□□□□ 0.69
SFXN4-208ENST00000490417 C8orf37Q96NL8 207 aa19.38■□□□□ 0.69
SFXN4-208ENST00000490417 PXDNQ92626 1479 aa19.37■□□□□ 0.69
SFXN4-208ENST00000490417 ROCK2O75116 1388 aaKnown RBP19.37■□□□□ 0.69
SFXN4-208ENST00000490417 CENPJQ9HC77 1338 aaPredicted RBP19.37■□□□□ 0.69
SFXN4-208ENST00000490417 NGDNQ8NEJ9 315 aaKnown RBP19.37■□□□□ 0.69
SFXN4-208ENST00000490417 ADAMTS2O95450 1211 aa19.36■□□□□ 0.69
SFXN4-208ENST00000490417 HAP1P54257 671 aaPredicted RBP19.36■□□□□ 0.69
SFXN4-208ENST00000490417 POTEAQ6S8J7 498 aa19.36■□□□□ 0.69
SFXN4-208ENST00000490417 PMFBP1Q8TBY8 1022 aa19.36■□□□□ 0.69
SFXN4-208ENST00000490417 TULP4Q9NRJ4 1543 aa19.35■□□□□ 0.69
SFXN4-208ENST00000490417 SPATA31A3Q5VYP0 1347 aa19.35■□□□□ 0.69
SFXN4-208ENST00000490417 CDK19Q9BWU1 502 aa19.35■□□□□ 0.69
SFXN4-208ENST00000490417 SBNO1A3KN83 1393 aa19.34■□□□□ 0.69
SFXN4-208ENST00000490417 ARHGEF10O15013 1369 aa19.34■□□□□ 0.69
SFXN4-208ENST00000490417 AFF2P51816 1311 aa19.34■□□□□ 0.69
SFXN4-208ENST00000490417 RXRBP28702 533 aa19.34■□□□□ 0.69
SFXN4-208ENST00000490417 LMOD2Q6P5Q4 547 aa19.34■□□□□ 0.69
SFXN4-208ENST00000490417 NUDT16Q96DE0 195 aaKnown RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 1235.9 ms