RNA–Protein interactions for RNA: ENST00000490346.1

ECM1-205, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-205ENST00000490346 TRPM1Q7Z4N2 1603 aa13.17□□□□□ -0.3
ECM1-205ENST00000490346 SAFB2Q14151 953 aaKnown RBP eCLIP13.17□□□□□ -0.3
ECM1-205ENST00000490346 NBPF8Q3BBV2 869 aa13.17□□□□□ -0.3
ECM1-205ENST00000490346 SIRT1Q96EB6 747 aa13.17□□□□□ -0.3
ECM1-205ENST00000490346 ROBO1Q9Y6N7 1651 aa13.17□□□□□ -0.3
ECM1-205ENST00000490346 POGKQ9P215 609 aa13.16□□□□□ -0.3
ECM1-205ENST00000490346 ARHGEF28Q8N1W1 1705 aaKnown RBP13.16□□□□□ -0.3
ECM1-205ENST00000490346 MST1RQ04912 1400 aa13.15□□□□□ -0.3
ECM1-205ENST00000490346 HSPA1LP34931 641 aa13.15□□□□□ -0.3
ECM1-205ENST00000490346 CDC42BPGQ6DT37 1551 aa13.15□□□□□ -0.3
ECM1-205ENST00000490346 ROCK2O75116 1388 aaKnown RBP13.14□□□□□ -0.31
ECM1-205ENST00000490346 C1orf167Q5SNV9 1468 aa13.11□□□□□ -0.31
ECM1-205ENST00000490346 NUTM2FA1L443 756 aa13.11□□□□□ -0.31
ECM1-205ENST00000490346 BRINP3Q76B58 766 aa13.11□□□□□ -0.31
ECM1-205ENST00000490346 HIRIP3Q9BW71 556 aaPredicted RBP13.11□□□□□ -0.31
ECM1-205ENST00000490346 MINK1Q8N4C8 1332 aaPredicted RBP13.11□□□□□ -0.31
ECM1-205ENST00000490346 FMN2Q9NZ56 1722 aa13.1□□□□□ -0.31
ECM1-205ENST00000490346 RALGAPBQ86X10 1494 aa13.1□□□□□ -0.31
ECM1-205ENST00000490346 ADGRB2O60241 1585 aa13.1□□□□□ -0.31
ECM1-205ENST00000490346 TIMELESSQ9UNS1 1208 aa13.09□□□□□ -0.31
ECM1-205ENST00000490346 GPRASP1Q5JY77 1395 aa13.08□□□□□ -0.31
ECM1-205ENST00000490346 PHLPP1O60346 1717 aa13.08□□□□□ -0.32
ECM1-205ENST00000490346 ORAI2Q96SN7 254 aa13.08□□□□□ -0.32
ECM1-205ENST00000490346 AHDC1Q5TGY3 1603 aaPredicted RBP13.07□□□□□ -0.32
ECM1-205ENST00000490346 ESCO1Q5FWF5 840 aa13.07□□□□□ -0.32
ECM1-205ENST00000490346 CARD11Q9BXL7 1154 aa13.07□□□□□ -0.32
ECM1-205ENST00000490346 QRICH2Q9H0J4 1663 aa13.07□□□□□ -0.32
ECM1-205ENST00000490346 CENPJQ9HC77 1338 aaPredicted RBP13.07□□□□□ -0.32
ECM1-205ENST00000490346 DDX17Q92841 729 aaKnown RBP13.06□□□□□ -0.32
ECM1-205ENST00000490346 RGPD8O14715 1765 aaPredicted RBP13.06□□□□□ -0.32
ECM1-205ENST00000490346 COL16A1Q07092 1604 aaPredicted RBP13.06□□□□□ -0.32
ECM1-205ENST00000490346 NHSL1Q5SYE7 1610 aa13.06□□□□□ -0.32
ECM1-205ENST00000490346 WASLO00401 505 aaPredicted RBP13.05□□□□□ -0.32
ECM1-205ENST00000490346 USP32Q8NFA0 1604 aa13.05□□□□□ -0.32
ECM1-205ENST00000490346 EIF3AQ14152 1382 aaKnown RBP13.05□□□□□ -0.32
ECM1-205ENST00000490346 ANKARQ7Z5J8 1434 aa13.04□□□□□ -0.32
ECM1-205ENST00000490346 TULP4Q9NRJ4 1543 aa13.03□□□□□ -0.32
ECM1-205ENST00000490346 PRR36Q9H6K5 1346 aa13.03□□□□□ -0.32
ECM1-205ENST00000490346 CDK19Q9BWU1 502 aa13.02□□□□□ -0.33
ECM1-205ENST00000490346 KIF1AQ12756 1690 aa13.02□□□□□ -0.33
ECM1-205ENST00000490346 FOXO3O43524 673 aa13.01□□□□□ -0.33
ECM1-205ENST00000490346 PHF8Q9UPP1 1060 aa13.01□□□□□ -0.33
ECM1-205ENST00000490346 ATP7BP35670 1465 aa13□□□□□ -0.33
ECM1-205ENST00000490346 NPHP3Q7Z494 1330 aa13□□□□□ -0.33
ECM1-205ENST00000490346 XPCQ01831 940 aaPredicted RBP13□□□□□ -0.33
ECM1-205ENST00000490346 JCADQ9P266 1359 aa12.99□□□□□ -0.33
ECM1-205ENST00000490346 SOS2Q07890 1332 aaPredicted RBP12.99□□□□□ -0.33
ECM1-205ENST00000490346 SRPK2P78362 688 aaKnown RBP12.99□□□□□ -0.33
ECM1-205ENST00000490346 PMFBP1Q8TBY8 1022 aa12.99□□□□□ -0.33
ECM1-205ENST00000490346 NUDT16Q96DE0 195 aaKnown RBP12.99□□□□□ -0.33
ECM1-205ENST00000490346 PXDNQ92626 1479 aa12.98□□□□□ -0.33
ECM1-205ENST00000490346 USP47Q96K76 1375 aa12.98□□□□□ -0.33
ECM1-205ENST00000490346 EVC2Q86UK5 1308 aa12.98□□□□□ -0.33
ECM1-205ENST00000490346 CABP2Q9NPB3 220 aa12.98□□□□□ -0.33
ECM1-205ENST00000490346 ITSN1Q15811 1721 aa12.98□□□□□ -0.33
ECM1-205ENST00000490346 SHPRHQ149N8 1683 aa12.97□□□□□ -0.33
ECM1-205ENST00000490346 TOPAZ1Q8N9V7 1692 aa12.97□□□□□ -0.33
ECM1-205ENST00000490346 LRRC59Q96AG4 307 aaKnown RBP12.97□□□□□ -0.33
ECM1-205ENST00000490346 SBNO2Q9Y2G9 1366 aa12.96□□□□□ -0.33
ECM1-205ENST00000490346 MED1Q15648 1581 aaPredicted RBP12.96□□□□□ -0.33
ECM1-205ENST00000490346 ST20-MTHFSA0A0A6YYL1 179 aa12.96□□□□□ -0.33
ECM1-205ENST00000490346 KRT28Q7Z3Y7 464 aa12.95□□□□□ -0.34
ECM1-205ENST00000490346 NGDNQ8NEJ9 315 aaKnown RBP12.95□□□□□ -0.34
ECM1-205ENST00000490346 CCDC61Q9Y6R9 512 aa12.95□□□□□ -0.34
ECM1-205ENST00000490346 PNPLA6Q8IY17 1366 aa12.94□□□□□ -0.34
ECM1-205ENST00000490346 PSME1Q06323 249 aa12.94□□□□□ -0.34
ECM1-205ENST00000490346 TESK2Q96S53 571 aa12.94□□□□□ -0.34
ECM1-205ENST00000490346 PPIP5K1Q6PFW1 1433 aa12.94□□□□□ -0.34
ECM1-205ENST00000490346 ACEP12821 1306 aa12.92□□□□□ -0.34
ECM1-205ENST00000490346 SPATA31A6Q5VVP1 1343 aa12.92□□□□□ -0.34
ECM1-205ENST00000490346 PLEKHG3A1L390 1219 aa12.92□□□□□ -0.34
ECM1-205ENST00000490346 NUTM2BA6NNL0 878 aaPredicted RBP12.92□□□□□ -0.34
ECM1-205ENST00000490346 NUTM2EB1AL46 878 aaPredicted RBP12.92□□□□□ -0.34
ECM1-205ENST00000490346 NUTM2AQ8IVF1 878 aaPredicted RBP12.92□□□□□ -0.34
ECM1-205ENST00000490346 LRP6O75581 1613 aa12.91□□□□□ -0.34
ECM1-205ENST00000490346 SPATA31A3Q5VYP0 1347 aa12.91□□□□□ -0.34
ECM1-205ENST00000490346 TRPM3Q9HCF6 1732 aaPredicted RBP12.91□□□□□ -0.34
ECM1-205ENST00000490346 TNS3Q68CZ2 1445 aa12.91□□□□□ -0.34
ECM1-205ENST00000490346 CABP1Q9NZU7 370 aa12.91□□□□□ -0.34
ECM1-205ENST00000490346 SBNO1A3KN83 1393 aa12.91□□□□□ -0.34
ECM1-205ENST00000490346 POLR3AO14802 1390 aaPredicted RBP12.91□□□□□ -0.34
ECM1-205ENST00000490346 ATAD2Q6PL18 1390 aa12.91□□□□□ -0.34
ECM1-205ENST00000490346 LMOD2Q6P5Q4 547 aa12.9□□□□□ -0.34
ECM1-205ENST00000490346 COL22A1Q8NFW1 1626 aaPredicted RBP12.9□□□□□ -0.34
ECM1-205ENST00000490346 DISP3Q9P2K9 1392 aa12.9□□□□□ -0.34
ECM1-205ENST00000490346 PAK3O75914 559 aaPredicted RBP12.88□□□□□ -0.35
ECM1-205ENST00000490346 EIF4G2P78344 907 aaKnown RBP eCLIP12.88□□□□□ -0.35
ECM1-205ENST00000490346 TMF1P82094 1093 aa12.88□□□□□ -0.35
ECM1-205ENST00000490346 ALS2Q96Q42 1657 aa12.87□□□□□ -0.35
ECM1-205ENST00000490346 ARHGEF10O15013 1369 aa12.87□□□□□ -0.35
ECM1-205ENST00000490346 SLC24A1O60721 1099 aa12.87□□□□□ -0.35
ECM1-205ENST00000490346 PLEKHG5O94827 1062 aa12.87□□□□□ -0.35
ECM1-205ENST00000490346 HSPA5P11021 654 aaKnown RBP12.87□□□□□ -0.35
ECM1-205ENST00000490346 MEX3CQ5U5Q3 659 aaKnown RBP12.87□□□□□ -0.35
ECM1-205ENST00000490346 PHF23Q9BUL5 403 aaPredicted RBP12.87□□□□□ -0.35
ECM1-205ENST00000490346 ADAMTS2O95450 1211 aa12.86□□□□□ -0.35
ECM1-205ENST00000490346 TMC1Q8TDI8 760 aa12.86□□□□□ -0.35
ECM1-205ENST00000490346 PUS7Q96PZ0 661 aaKnown RBP12.86□□□□□ -0.35
ECM1-205ENST00000490346 AKAP12Q02952 1782 aa12.86□□□□□ -0.35
ECM1-205ENST00000490346 CABLES1Q8TDN4 633 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms