RNA–Protein interactions for RNA: ENST00000490302.1

PKDCC-208, Transcript of protein kinase domain containing, cytoplasmic, humanhuman

TSL 2

Gene PKDCC, Length 1,447 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKDCC-208ENST00000490302 FNBP4Q8N3X1 1017 aaPredicted RBP26.14■■□□□ 1.78
PKDCC-208ENST00000490302 NPHP3Q7Z494 1330 aa26.14■■□□□ 1.77
PKDCC-208ENST00000490302 ATAD2Q6PL18 1390 aa26.12■■□□□ 1.77
PKDCC-208ENST00000490302 COL22A1Q8NFW1 1626 aaPredicted RBP26.12■■□□□ 1.77
PKDCC-208ENST00000490302 CDC42BPGQ6DT37 1551 aa26.11■■□□□ 1.77
PKDCC-208ENST00000490302 FOXD1Q16676 465 aa26.11■■□□□ 1.77
PKDCC-208ENST00000490302 ADGRF5Q8IZF2 1346 aa26.1■■□□□ 1.77
PKDCC-208ENST00000490302 ATRNO75882 1429 aa26.08■■□□□ 1.77
PKDCC-208ENST00000490302 STK26Q9P289 416 aa26.08■■□□□ 1.77
PKDCC-208ENST00000490302 MYOM2P54296 1465 aa26.08■■□□□ 1.77
PKDCC-208ENST00000490302 FOXO3O43524 673 aa26.07■■□□□ 1.76
PKDCC-208ENST00000490302 CCDC144AA2RUR9 1427 aa26.07■■□□□ 1.76
PKDCC-208ENST00000490302 PXDNQ92626 1479 aa26.06■■□□□ 1.76
PKDCC-208ENST00000490302 RGL3Q3MIN7 710 aa26.06■■□□□ 1.76
PKDCC-208ENST00000490302 LRPPRCP42704 1394 aaKnown RBP26.06■■□□□ 1.76
PKDCC-208ENST00000490302 XPCQ01831 940 aaPredicted RBP26.05■■□□□ 1.76
PKDCC-208ENST00000490302 WAPLQ7Z5K2 1190 aa26.05■■□□□ 1.76
PKDCC-208ENST00000490302 NUTM2FA1L443 756 aa26.04■■□□□ 1.76
PKDCC-208ENST00000490302 TECPR2O15040 1411 aa26.03■■□□□ 1.76
PKDCC-208ENST00000490302 ANKRD30BQ9BXX2 1392 aa26.03■■□□□ 1.76
PKDCC-208ENST00000490302 SPATA31E1Q6ZUB1 1445 aa26.01■■□□□ 1.75
PKDCC-208ENST00000490302 BCL9LQ86UU0 1499 aa26.01■■□□□ 1.75
PKDCC-208ENST00000490302 ABCC11Q96J66 1382 aa26.01■■□□□ 1.75
PKDCC-208ENST00000490302 TMEM132EQ6IEE7 984 aa26■■□□□ 1.75
PKDCC-208ENST00000490302 PLEKHH1Q9ULM0 1364 aa25.99■■□□□ 1.75
PKDCC-208ENST00000490302 MPHOSPH9Q99550 1183 aa25.98■■□□□ 1.75
PKDCC-208ENST00000490302 GJD4Q96KN9 370 aaPredicted RBP25.97■■□□□ 1.75
PKDCC-208ENST00000490302 PIK3C2GO75747 1445 aa25.95■■□□□ 1.75
PKDCC-208ENST00000490302 KNDC1Q76NI1 1749 aa25.95■■□□□ 1.74
PKDCC-208ENST00000490302 IFT172Q9UG01 1749 aa25.95■■□□□ 1.74
PKDCC-208ENST00000490302 MARF1Q9Y4F3 1742 aaKnown RBP25.95■■□□□ 1.74
PKDCC-208ENST00000490302 SPATA31A3Q5VYP0 1347 aa25.94■■□□□ 1.74
PKDCC-208ENST00000490302 CCDC125Q86Z20 511 aa25.94■■□□□ 1.74
PKDCC-208ENST00000490302 YTHDC2Q9H6S0 1430 aaKnown RBP25.94■■□□□ 1.74
PKDCC-208ENST00000490302 ZRANB1Q9UGI0 708 aa25.93■■□□□ 1.74
PKDCC-208ENST00000490302 FMN2Q9NZ56 1722 aa25.92■■□□□ 1.74
PKDCC-208ENST00000490302 KRT28Q7Z3Y7 464 aa25.91■■□□□ 1.74
PKDCC-208ENST00000490302 UNC5CLQ8IV45 518 aa25.91■■□□□ 1.74
PKDCC-208ENST00000490302 SIRT1Q96EB6 747 aa25.91■■□□□ 1.74
PKDCC-208ENST00000490302 KIF1AQ12756 1690 aa25.9■■□□□ 1.74
PKDCC-208ENST00000490302 SLIT2O94813 1529 aa25.88■■□□□ 1.73
PKDCC-208ENST00000490302 C14orf93Q9H972 538 aaKnown RBP25.88■■□□□ 1.73
PKDCC-208ENST00000490302 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.87■■□□□ 1.73
PKDCC-208ENST00000490302 RALGAPBQ86X10 1494 aa25.86■■□□□ 1.73
PKDCC-208ENST00000490302 HAP1P54257 671 aaPredicted RBP25.86■■□□□ 1.73
PKDCC-208ENST00000490302 PSME1Q06323 249 aa25.86■■□□□ 1.73
PKDCC-208ENST00000490302 PHF8Q9UPP1 1060 aa25.86■■□□□ 1.73
PKDCC-208ENST00000490302 DHX57Q6P158 1386 aaKnown RBP25.84■■□□□ 1.73
PKDCC-208ENST00000490302 GLI3P10071 1580 aa25.84■■□□□ 1.73
PKDCC-208ENST00000490302 USP32Q8NFA0 1604 aa25.83■■□□□ 1.73
PKDCC-208ENST00000490302 TNS3Q68CZ2 1445 aa25.83■■□□□ 1.73
PKDCC-208ENST00000490302 CFAP70Q5T0N1 1121 aa25.83■■□□□ 1.73
PKDCC-208ENST00000490302 ACIN1Q9UKV3 1341 aaKnown RBP25.81■■□□□ 1.72
PKDCC-208ENST00000490302 CABLES1Q8TDN4 633 aa25.8■■□□□ 1.72
PKDCC-208ENST00000490302 NRXN1Q9ULB1 1477 aa25.8■■□□□ 1.72
PKDCC-208ENST00000490302 PRAM1Q96QH2 718 aa25.8■■□□□ 1.72
PKDCC-208ENST00000490302 PLEKHG5O94827 1062 aa25.79■■□□□ 1.72
PKDCC-208ENST00000490302 SAFB2Q14151 953 aaKnown RBP eCLIP25.79■■□□□ 1.72
PKDCC-208ENST00000490302 SBNO1A3KN83 1393 aa25.79■■□□□ 1.72
PKDCC-208ENST00000490302 BLMP54132 1417 aaPredicted RBP25.79■■□□□ 1.72
PKDCC-208ENST00000490302 VPS72Q15906 364 aa25.78■■□□□ 1.72
PKDCC-208ENST00000490302 LMOD2Q6P5Q4 547 aa25.78■■□□□ 1.72
PKDCC-208ENST00000490302 SEPT12Q8IYM1 358 aa25.77■■□□□ 1.72
PKDCC-208ENST00000490302 POGKQ9P215 609 aa25.76■■□□□ 1.71
PKDCC-208ENST00000490302 CCDC9Q9Y3X0 531 aaKnown RBP25.76■■□□□ 1.71
PKDCC-208ENST00000490302 RGPD8O14715 1765 aaPredicted RBP25.75■■□□□ 1.71
PKDCC-208ENST00000490302 ARHGEF10O15013 1369 aa25.75■■□□□ 1.71
PKDCC-208ENST00000490302 SF3B2Q13435 895 aaKnown RBP25.73■■□□□ 1.71
PKDCC-208ENST00000490302 PMFBP1Q8TBY8 1022 aa25.73■■□□□ 1.71
PKDCC-208ENST00000490302 ANKARQ7Z5J8 1434 aa25.72■■□□□ 1.71
PKDCC-208ENST00000490302 DLC1Q96QB1 1528 aa25.72■■□□□ 1.71
PKDCC-208ENST00000490302 DEFB132Q7Z7B7 95 aa25.71■■□□□ 1.71
PKDCC-208ENST00000490302 EP400Q96L91 3159 aa25.71■■□□□ 1.71
PKDCC-208ENST00000490302 ONECUT3O60422 494 aaPredicted RBP25.71■■□□□ 1.71
PKDCC-208ENST00000490302 PLCH1Q4KWH8 1693 aa25.7■■□□□ 1.71
PKDCC-208ENST00000490302 NWD2Q9ULI1 1742 aa25.7■■□□□ 1.7
PKDCC-208ENST00000490302 BRWD3Q6RI45 1802 aa25.7■■□□□ 1.7
PKDCC-208ENST00000490302 FAM83GA6ND36 823 aa25.69■■□□□ 1.7
PKDCC-208ENST00000490302 KRT27Q7Z3Y8 459 aa25.69■■□□□ 1.7
PKDCC-208ENST00000490302 ABCA3Q99758 1704 aa25.68■■□□□ 1.7
PKDCC-208ENST00000490302 TRAK1Q9UPV9 953 aa25.66■■□□□ 1.7
PKDCC-208ENST00000490302 ADGRB2O60241 1585 aa25.66■■□□□ 1.7
PKDCC-208ENST00000490302 HIRIP3Q9BW71 556 aaPredicted RBP25.65■■□□□ 1.7
PKDCC-208ENST00000490302 A0A0G2JS52 829 aa25.64■■□□□ 1.7
PKDCC-208ENST00000490302 MYT1Q01538 1121 aa25.64■■□□□ 1.7
PKDCC-208ENST00000490302 GPRASP1Q5JY77 1395 aa25.64■■□□□ 1.69
PKDCC-208ENST00000490302 ADGRB1O14514 1584 aa25.63■■□□□ 1.69
PKDCC-208ENST00000490302 EIF3AQ14152 1382 aaKnown RBP25.63■■□□□ 1.69
PKDCC-208ENST00000490302 BTG4Q9NY30 223 aa25.63■■□□□ 1.69
PKDCC-208ENST00000490302 MINK1Q8N4C8 1332 aaPredicted RBP25.62■■□□□ 1.69
PKDCC-208ENST00000490302 SRCAPQ6ZRS2 3230 aa25.61■■□□□ 1.69
PKDCC-208ENST00000490302 RAB3GAP2Q9H2M9 1393 aa25.6■■□□□ 1.69
PKDCC-208ENST00000490302 TRPM3Q9HCF6 1732 aaPredicted RBP25.6■■□□□ 1.69
PKDCC-208ENST00000490302 FAM98CQ17RN3 349 aaKnown RBP25.6■■□□□ 1.69
PKDCC-208ENST00000490302 KDM2AQ9Y2K7 1162 aa25.6■■□□□ 1.69
PKDCC-208ENST00000490302 PRR36Q9H6K5 1346 aa25.6■■□□□ 1.69
PKDCC-208ENST00000490302 TULP4Q9NRJ4 1543 aa25.58■■□□□ 1.69
PKDCC-208ENST00000490302 WASLO00401 505 aaPredicted RBP25.58■■□□□ 1.69
PKDCC-208ENST00000490302 BAG6P46379 1132 aa25.58■■□□□ 1.69
PKDCC-208ENST00000490302 NRAPQ86VF7 1730 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms