RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 SLC24A1O60721 1099 aa17.67■□□□□ 0.42
HDAC1-210ENST00000490081 TMEM94Q12767 1356 aa17.66■□□□□ 0.42
HDAC1-210ENST00000490081 SOCS7O14512 581 aa17.66■□□□□ 0.42
HDAC1-210ENST00000490081 SBNO2Q9Y2G9 1366 aa17.66■□□□□ 0.42
HDAC1-210ENST00000490081 PRAM1Q96QH2 718 aa17.65■□□□□ 0.42
HDAC1-210ENST00000490081 C19orf44Q9H6X5 657 aa17.65■□□□□ 0.42
HDAC1-210ENST00000490081 WAPLQ7Z5K2 1190 aa17.64■□□□□ 0.41
HDAC1-210ENST00000490081 CENPJQ9HC77 1338 aaPredicted RBP17.64■□□□□ 0.41
HDAC1-210ENST00000490081 DCCP43146 1447 aa17.64■□□□□ 0.41
HDAC1-210ENST00000490081 ADGRL3Q9HAR2 1447 aa17.64■□□□□ 0.41
HDAC1-210ENST00000490081 MED1Q15648 1581 aaPredicted RBP17.63■□□□□ 0.41
HDAC1-210ENST00000490081 POGKQ9P215 609 aa17.63■□□□□ 0.41
HDAC1-210ENST00000490081 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.63■□□□□ 0.41
HDAC1-210ENST00000490081 PLEKHH1Q9ULM0 1364 aa17.62■□□□□ 0.41
HDAC1-210ENST00000490081 ADGRB2O60241 1585 aa17.62■□□□□ 0.41
HDAC1-210ENST00000490081 USP47Q96K76 1375 aa17.61■□□□□ 0.41
HDAC1-210ENST00000490081 EIF4G2P78344 907 aaKnown RBP eCLIP17.6■□□□□ 0.41
HDAC1-210ENST00000490081 NALCNQ8IZF0 1738 aa17.6■□□□□ 0.41
HDAC1-210ENST00000490081 MSH6P52701 1360 aa17.59■□□□□ 0.41
HDAC1-210ENST00000490081 QRICH2Q9H0J4 1663 aa17.58■□□□□ 0.41
HDAC1-210ENST00000490081 CDC42BPGQ6DT37 1551 aa17.58■□□□□ 0.41
HDAC1-210ENST00000490081 ST20-MTHFSA0A0A6YYL1 179 aa17.58■□□□□ 0.4
HDAC1-210ENST00000490081 PUS7Q96PZ0 661 aaKnown RBP17.58■□□□□ 0.4
HDAC1-210ENST00000490081 TESK2Q96S53 571 aa17.58■□□□□ 0.4
HDAC1-210ENST00000490081 CADPS2Q86UW7 1296 aa17.57■□□□□ 0.4
HDAC1-210ENST00000490081 WASLO00401 505 aaPredicted RBP17.55■□□□□ 0.4
HDAC1-210ENST00000490081 C14orf37Q86TY3 774 aa17.55■□□□□ 0.4
HDAC1-210ENST00000490081 RBM33Q96EV2 1170 aaKnown RBP17.55■□□□□ 0.4
HDAC1-210ENST00000490081 ATF3P18847 181 aa17.54■□□□□ 0.4
HDAC1-210ENST00000490081 HSPA5P11021 654 aaKnown RBP17.53■□□□□ 0.4
HDAC1-210ENST00000490081 SAFB2Q14151 953 aaKnown RBP eCLIP17.53■□□□□ 0.4
HDAC1-210ENST00000490081 FMN2Q9NZ56 1722 aa17.52■□□□□ 0.4
HDAC1-210ENST00000490081 EVC2Q86UK5 1308 aa17.52■□□□□ 0.4
HDAC1-210ENST00000490081 MINK1Q8N4C8 1332 aaPredicted RBP17.52■□□□□ 0.4
HDAC1-210ENST00000490081 ANKARQ7Z5J8 1434 aa17.51■□□□□ 0.39
HDAC1-210ENST00000490081 CDK19Q9BWU1 502 aa17.5■□□□□ 0.39
HDAC1-210ENST00000490081 SLAIN2Q9P270 581 aa17.5■□□□□ 0.39
HDAC1-210ENST00000490081 MST1RQ04912 1400 aa17.49■□□□□ 0.39
HDAC1-210ENST00000490081 TULP4Q9NRJ4 1543 aa17.49■□□□□ 0.39
HDAC1-210ENST00000490081 CDCA8Q53HL2 280 aa17.49■□□□□ 0.39
HDAC1-210ENST00000490081 TMF1P82094 1093 aa17.48■□□□□ 0.39
HDAC1-210ENST00000490081 HIRIP3Q9BW71 556 aaPredicted RBP17.48■□□□□ 0.39
HDAC1-210ENST00000490081 ROBO1Q9Y6N7 1651 aa17.48■□□□□ 0.39
HDAC1-210ENST00000490081 C1orf167Q5SNV9 1468 aa17.47■□□□□ 0.39
HDAC1-210ENST00000490081 CCDC61Q9Y6R9 512 aa17.46■□□□□ 0.39
HDAC1-210ENST00000490081 USP32Q8NFA0 1604 aa17.46■□□□□ 0.39
HDAC1-210ENST00000490081 ITSN1Q15811 1721 aa17.44■□□□□ 0.38
HDAC1-210ENST00000490081 ATAD2Q6PL18 1390 aa17.44■□□□□ 0.38
HDAC1-210ENST00000490081 RGPD8O14715 1765 aaPredicted RBP17.44■□□□□ 0.38
HDAC1-210ENST00000490081 NUDT16Q96DE0 195 aaKnown RBP17.44■□□□□ 0.38
HDAC1-210ENST00000490081 ATP7BP35670 1465 aa17.44■□□□□ 0.38
HDAC1-210ENST00000490081 PLEKHG3A1L390 1219 aa17.43■□□□□ 0.38
HDAC1-210ENST00000490081 PRR36Q9H6K5 1346 aa17.43■□□□□ 0.38
HDAC1-210ENST00000490081 TOPAZ1Q8N9V7 1692 aa17.42■□□□□ 0.38
HDAC1-210ENST00000490081 SRPK2P78362 688 aaKnown RBP17.42■□□□□ 0.38
HDAC1-210ENST00000490081 RGS17Q9UGC6 210 aaPredicted RBP17.42■□□□□ 0.38
HDAC1-210ENST00000490081 NINLQ9Y2I6 1382 aa17.41■□□□□ 0.38
HDAC1-210ENST00000490081 CABP2Q9NPB3 220 aa17.41■□□□□ 0.38
HDAC1-210ENST00000490081 KIF1AQ12756 1690 aa17.4■□□□□ 0.38
HDAC1-210ENST00000490081 BRINP3Q76B58 766 aa17.4■□□□□ 0.38
HDAC1-210ENST00000490081 ESCO1Q5FWF5 840 aa17.38■□□□□ 0.37
HDAC1-210ENST00000490081 ORAI2Q96SN7 254 aa17.38■□□□□ 0.37
HDAC1-210ENST00000490081 PHF8Q9UPP1 1060 aa17.38■□□□□ 0.37
HDAC1-210ENST00000490081 POLR3AO14802 1390 aaPredicted RBP17.38■□□□□ 0.37
HDAC1-210ENST00000490081 C11orf95C9JLR9 678 aaPredicted RBP17.37■□□□□ 0.37
HDAC1-210ENST00000490081 PHLPP1O60346 1717 aa17.36■□□□□ 0.37
HDAC1-210ENST00000490081 ZNF692Q9BU19 519 aaPredicted RBP17.36■□□□□ 0.37
HDAC1-210ENST00000490081 BRD4O60885 1362 aaPredicted RBP17.36■□□□□ 0.37
HDAC1-210ENST00000490081 PPIP5K1Q6PFW1 1433 aa17.36■□□□□ 0.37
HDAC1-210ENST00000490081 NUTM2FA1L443 756 aa17.35■□□□□ 0.37
HDAC1-210ENST00000490081 CABP1Q9NZU7 370 aa17.35■□□□□ 0.37
HDAC1-210ENST00000490081 COL16A1Q07092 1604 aaPredicted RBP17.35■□□□□ 0.37
HDAC1-210ENST00000490081 NHSL1Q5SYE7 1610 aa17.35■□□□□ 0.37
HDAC1-210ENST00000490081 AHDC1Q5TGY3 1603 aaPredicted RBP17.35■□□□□ 0.37
HDAC1-210ENST00000490081 CPSF1Q10570 1443 aaKnown RBP17.34■□□□□ 0.37
HDAC1-210ENST00000490081 NPHP3Q7Z494 1330 aa17.34■□□□□ 0.37
HDAC1-210ENST00000490081 SOS2Q07890 1332 aaPredicted RBP17.33■□□□□ 0.36
HDAC1-210ENST00000490081 KIF7Q2M1P5 1343 aa17.33■□□□□ 0.36
HDAC1-210ENST00000490081 CCDC7Q96M83 1385 aa17.32■□□□□ 0.36
HDAC1-210ENST00000490081 AKAP12Q02952 1782 aa17.32■□□□□ 0.36
HDAC1-210ENST00000490081 ACEP12821 1306 aa17.31■□□□□ 0.36
HDAC1-210ENST00000490081 WASHC2AQ641Q2 1341 aa17.31■□□□□ 0.36
HDAC1-210ENST00000490081 SLC12A5Q9H2X9 1139 aa17.31■□□□□ 0.36
HDAC1-210ENST00000490081 TERF2IPQ9NYB0 399 aa17.31■□□□□ 0.36
HDAC1-210ENST00000490081 MYOM1P52179 1685 aa17.31■□□□□ 0.36
HDAC1-210ENST00000490081 CD163L1Q9NR16 1453 aa17.31■□□□□ 0.36
HDAC1-210ENST00000490081 JCADQ9P266 1359 aa17.3■□□□□ 0.36
HDAC1-210ENST00000490081 FOXO3O43524 673 aa17.3■□□□□ 0.36
HDAC1-210ENST00000490081 PSME1Q06323 249 aa17.3■□□□□ 0.36
HDAC1-210ENST00000490081 NGDNQ8NEJ9 315 aaKnown RBP17.3■□□□□ 0.36
HDAC1-210ENST00000490081 PMFBP1Q8TBY8 1022 aa17.3■□□□□ 0.36
HDAC1-210ENST00000490081 POTEAQ6S8J7 498 aa17.29■□□□□ 0.36
HDAC1-210ENST00000490081 PXDNQ92626 1479 aa17.29■□□□□ 0.36
HDAC1-210ENST00000490081 SSH2Q76I76 1423 aa17.29■□□□□ 0.36
HDAC1-210ENST00000490081 SBNO1A3KN83 1393 aa17.28■□□□□ 0.36
HDAC1-210ENST00000490081 ANKRD36BQ8N2N9 1353 aa17.28■□□□□ 0.36
HDAC1-210ENST00000490081 KRT28Q7Z3Y7 464 aa17.28■□□□□ 0.36
HDAC1-210ENST00000490081 HDGFL2Q7Z4V5 671 aaPredicted RBP17.28■□□□□ 0.36
HDAC1-210ENST00000490081 TMC1Q8TDI8 760 aa17.28■□□□□ 0.36
HDAC1-210ENST00000490081 MON2Q7Z3U7 1717 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms