RNA–Protein interactions for RNA: ENST00000490077.5

TNXB-206, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,756 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-206ENST00000490077 BRPF3Q9ULD4 1205 aa17.22■□□□□ 0.35
TNXB-206ENST00000490077 PPRC1Q5VV67 1664 aaKnown RBP17.21■□□□□ 0.35
TNXB-206ENST00000490077 MINK1Q8N4C8 1332 aaPredicted RBP17.21■□□□□ 0.35
TNXB-206ENST00000490077 E9PSI1 815 aa17.21■□□□□ 0.35
TNXB-206ENST00000490077 RARSP54136 660 aaKnown RBP17.21■□□□□ 0.35
TNXB-206ENST00000490077 IDI1Q13907 227 aa17.21■□□□□ 0.35
TNXB-206ENST00000490077 C14orf93Q9H972 538 aaKnown RBP17.21■□□□□ 0.35
TNXB-206ENST00000490077 U2SURPO15042 1029 aaKnown RBP17.2■□□□□ 0.34
TNXB-206ENST00000490077 RIMBP3CA6NJZ7 1639 aa17.2■□□□□ 0.34
TNXB-206ENST00000490077 RIMBP3BA6NNM3 1639 aa17.2■□□□□ 0.34
TNXB-206ENST00000490077 RIMBP3Q9UFD9 1639 aa17.2■□□□□ 0.34
TNXB-206ENST00000490077 ZNF518AQ6AHZ1 1483 aa17.19■□□□□ 0.34
TNXB-206ENST00000490077 MAP3K4Q9Y6R4 1608 aa17.19■□□□□ 0.34
TNXB-206ENST00000490077 EIF3AQ14152 1382 aaKnown RBP17.19■□□□□ 0.34
TNXB-206ENST00000490077 TET3O43151 1660 aa17.19■□□□□ 0.34
TNXB-206ENST00000490077 KIDINS220Q9ULH0 1771 aa17.18■□□□□ 0.34
TNXB-206ENST00000490077 VWDEQ8N2E2 1590 aa17.18■□□□□ 0.34
TNXB-206ENST00000490077 DEPDC5O75140 1603 aa17.17■□□□□ 0.34
TNXB-206ENST00000490077 SLKQ9H2G2 1235 aaPredicted RBP17.17■□□□□ 0.34
TNXB-206ENST00000490077 PPM1GO15355 546 aaPredicted RBP17.17■□□□□ 0.34
TNXB-206ENST00000490077 CFAP74Q9C0B2 1584 aa17.17■□□□□ 0.34
TNXB-206ENST00000490077 KDM5AP29375 1690 aaKnown RBP17.17■□□□□ 0.34
TNXB-206ENST00000490077 THUMPD2Q9BTF0 503 aaKnown RBP17.16■□□□□ 0.34
TNXB-206ENST00000490077 POGZQ7Z3K3 1410 aa17.16■□□□□ 0.34
TNXB-206ENST00000490077 NCKAP5LQ9HCH0 1330 aa17.16■□□□□ 0.34
TNXB-206ENST00000490077 SRPK2P78362 688 aaKnown RBP17.15■□□□□ 0.34
TNXB-206ENST00000490077 RUNDC1Q96C34 613 aa17.14■□□□□ 0.33
TNXB-206ENST00000490077 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.14■□□□□ 0.33
TNXB-206ENST00000490077 ZRANB1Q9UGI0 708 aa17.14■□□□□ 0.33
TNXB-206ENST00000490077 EFCAB6Q5THR3 1501 aa17.13■□□□□ 0.33
TNXB-206ENST00000490077 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.13■□□□□ 0.33
TNXB-206ENST00000490077 ARXQ96QS3 562 aa17.13■□□□□ 0.33
TNXB-206ENST00000490077 EXOSC9Q06265 439 aaKnown RBP17.12■□□□□ 0.33
TNXB-206ENST00000490077 PDZRN3Q9UPQ7 1066 aa17.12■□□□□ 0.33
TNXB-206ENST00000490077 WAPLQ7Z5K2 1190 aa17.12■□□□□ 0.33
TNXB-206ENST00000490077 FRMPD1Q5SYB0 1578 aa17.12■□□□□ 0.33
TNXB-206ENST00000490077 NPC1L1Q9UHC9 1359 aa17.11■□□□□ 0.33
TNXB-206ENST00000490077 PRAM1Q96QH2 718 aa17.11■□□□□ 0.33
TNXB-206ENST00000490077 POLR3AO14802 1390 aaPredicted RBP17.11■□□□□ 0.33
TNXB-206ENST00000490077 NEO1Q92859 1461 aa17.1■□□□□ 0.33
TNXB-206ENST00000490077 ELL2O00472 640 aaPredicted RBP17.1■□□□□ 0.33
TNXB-206ENST00000490077 ANO8Q9HCE9 1232 aaPredicted RBP17.1■□□□□ 0.33
TNXB-206ENST00000490077 ADGRB1O14514 1584 aa17.1■□□□□ 0.33
TNXB-206ENST00000490077 MLECQ14165 292 aa17.1■□□□□ 0.33
TNXB-206ENST00000490077 TRIM35Q9UPQ4 493 aa17.1■□□□□ 0.33
TNXB-206ENST00000490077 SHPRHQ149N8 1683 aa17.1■□□□□ 0.33
TNXB-206ENST00000490077 MLH3Q9UHC1 1453 aa17.09■□□□□ 0.33
TNXB-206ENST00000490077 HECW2Q9P2P5 1572 aa17.09■□□□□ 0.33
TNXB-206ENST00000490077 A0A1W2PP64 1363 aa17.08■□□□□ 0.33
TNXB-206ENST00000490077 FYB1O15117 783 aa17.08■□□□□ 0.33
TNXB-206ENST00000490077 SSH1Q8WYL5 1049 aa17.08■□□□□ 0.33
TNXB-206ENST00000490077 PHF23Q9BUL5 403 aaPredicted RBP17.08■□□□□ 0.33
TNXB-206ENST00000490077 SIGLEC1Q9BZZ2 1709 aa17.08■□□□□ 0.33
TNXB-206ENST00000490077 KIF1BO60333 1816 aa17.08■□□□□ 0.32
TNXB-206ENST00000490077 YEATS2Q9ULM3 1422 aa17.08■□□□□ 0.32
TNXB-206ENST00000490077 MYOM2P54296 1465 aa17.07■□□□□ 0.32
TNXB-206ENST00000490077 HMOX1P09601 288 aa17.07■□□□□ 0.32
TNXB-206ENST00000490077 TULP4Q9NRJ4 1543 aa17.07■□□□□ 0.32
TNXB-206ENST00000490077 CGNL1Q0VF96 1302 aa17.07■□□□□ 0.32
TNXB-206ENST00000490077 CABP1Q9NZU7 370 aa17.07■□□□□ 0.32
TNXB-206ENST00000490077 NRXN1Q9ULB1 1477 aa17.07■□□□□ 0.32
TNXB-206ENST00000490077 DAXXQ9UER7 740 aaPredicted RBP17.06■□□□□ 0.32
TNXB-206ENST00000490077 FAM69CQ0P6D2 419 aa17.06■□□□□ 0.32
TNXB-206ENST00000490077 C1orf115Q9H7X2 142 aa17.06■□□□□ 0.32
TNXB-206ENST00000490077 POGKQ9P215 609 aa17.06■□□□□ 0.32
TNXB-206ENST00000490077 ADGRB3O60242 1522 aa17.05■□□□□ 0.32
TNXB-206ENST00000490077 TRIM27P14373 513 aa17.05■□□□□ 0.32
TNXB-206ENST00000490077 PDE3AQ14432 1141 aa17.05■□□□□ 0.32
TNXB-206ENST00000490077 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.05■□□□□ 0.32
TNXB-206ENST00000490077 PHACTR3Q96KR7 559 aa17.05■□□□□ 0.32
TNXB-206ENST00000490077 PLEKHF1Q96S99 279 aa17.05■□□□□ 0.32
TNXB-206ENST00000490077 NOB1Q9ULX3 412 aaKnown RBP17.04■□□□□ 0.32
TNXB-206ENST00000490077 QRICH2Q9H0J4 1663 aa17.04■□□□□ 0.32
TNXB-206ENST00000490077 NUTM2FA1L443 756 aa17.03■□□□□ 0.32
TNXB-206ENST00000490077 TMPOP42166 694 aaKnown RBP17.03■□□□□ 0.32
TNXB-206ENST00000490077 SMC4Q9NTJ3 1288 aa17.03■□□□□ 0.32
TNXB-206ENST00000490077 GLI2P10070 1586 aa17.03■□□□□ 0.32
TNXB-206ENST00000490077 IFT172Q9UG01 1749 aa17.03■□□□□ 0.32
TNXB-206ENST00000490077 STAC3Q96MF2 364 aa17.02■□□□□ 0.32
TNXB-206ENST00000490077 EVC2Q86UK5 1308 aa17.02■□□□□ 0.32
TNXB-206ENST00000490077 DDRGK1Q96HY6 314 aa17.02■□□□□ 0.31
TNXB-206ENST00000490077 IQSEC2Q5JU85 1478 aa17.02■□□□□ 0.31
TNXB-206ENST00000490077 RIPK4P57078 832 aa17.01■□□□□ 0.31
TNXB-206ENST00000490077 GSE1Q14687 1217 aa17.01■□□□□ 0.31
TNXB-206ENST00000490077 ITPRIPQ8IWB1 547 aa17.01■□□□□ 0.31
TNXB-206ENST00000490077 TSPYL6Q8N831 410 aa17.01■□□□□ 0.31
TNXB-206ENST00000490077 DIP2BQ9P265 1576 aa17.01■□□□□ 0.31
TNXB-206ENST00000490077 TMEM57Q8N5G2 664 aa17.01■□□□□ 0.31
TNXB-206ENST00000490077 RICTORQ6R327 1708 aa17.01■□□□□ 0.31
TNXB-206ENST00000490077 DCTN1Q14203 1278 aa17■□□□□ 0.31
TNXB-206ENST00000490077 CDK19Q9BWU1 502 aa17■□□□□ 0.31
TNXB-206ENST00000490077 EMILIN1Q9Y6C2 1016 aa17■□□□□ 0.31
TNXB-206ENST00000490077 ATAD2Q6PL18 1390 aa17■□□□□ 0.31
TNXB-206ENST00000490077 FAM83GA6ND36 823 aa16.99■□□□□ 0.31
TNXB-206ENST00000490077 ABCC3O15438 1527 aa16.99■□□□□ 0.31
TNXB-206ENST00000490077 CAMSAP1Q5T5Y3 1602 aa16.99■□□□□ 0.31
TNXB-206ENST00000490077 DIP2CQ9Y2E4 1556 aa16.99■□□□□ 0.31
TNXB-206ENST00000490077 MFAP1P55081 439 aaKnown RBP16.99■□□□□ 0.31
TNXB-206ENST00000490077 NLRP1Q9C000 1473 aa16.98■□□□□ 0.31
TNXB-206ENST00000490077 VGFO15240 615 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms