RNA–Protein interactions for RNA: ENST00000490008.1

COMMD2-206, Transcript of COMM domain containing 2, humanhuman

TSL 2

Gene COMMD2, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-206ENST00000490008 SETD1AO15047 1707 aaKnown RBP20.16■□□□□ 0.82
COMMD2-206ENST00000490008 ZEB1P37275 1124 aaPredicted RBP20.15■□□□□ 0.82
COMMD2-206ENST00000490008 FBXO41Q8TF61 875 aa20.15■□□□□ 0.82
COMMD2-206ENST00000490008 GPRASP1Q5JY77 1395 aa20.15■□□□□ 0.82
COMMD2-206ENST00000490008 XRN1Q8IZH2 1706 aaKnown RBP20.14■□□□□ 0.81
COMMD2-206ENST00000490008 KIAA1210Q9ULL0 1709 aa20.14■□□□□ 0.81
COMMD2-206ENST00000490008 RALGAPBQ86X10 1494 aa20.14■□□□□ 0.81
COMMD2-206ENST00000490008 NUTM2FA1L443 756 aa20.13■□□□□ 0.81
COMMD2-206ENST00000490008 DLC1Q96QB1 1528 aa20.12■□□□□ 0.81
COMMD2-206ENST00000490008 ADGRL3Q9HAR2 1447 aa20.12■□□□□ 0.81
COMMD2-206ENST00000490008 SLC24A1O60721 1099 aa20.12■□□□□ 0.81
COMMD2-206ENST00000490008 ST20-MTHFSA0A0A6YYL1 179 aa20.11■□□□□ 0.81
COMMD2-206ENST00000490008 WASLO00401 505 aaPredicted RBP20.11■□□□□ 0.81
COMMD2-206ENST00000490008 CDK19Q9BWU1 502 aa20.11■□□□□ 0.81
COMMD2-206ENST00000490008 TRPM1Q7Z4N2 1603 aa20.1■□□□□ 0.81
COMMD2-206ENST00000490008 EIF4G2P78344 907 aaKnown RBP eCLIP20.09■□□□□ 0.81
COMMD2-206ENST00000490008 ESCO1Q5FWF5 840 aa20.09■□□□□ 0.81
COMMD2-206ENST00000490008 SRPK2P78362 688 aaKnown RBP20.08■□□□□ 0.81
COMMD2-206ENST00000490008 EVC2Q86UK5 1308 aa20.07■□□□□ 0.8
COMMD2-206ENST00000490008 DCCP43146 1447 aa20.07■□□□□ 0.8
COMMD2-206ENST00000490008 USP47Q96K76 1375 aa20.05■□□□□ 0.8
COMMD2-206ENST00000490008 ORAI2Q96SN7 254 aa20.04■□□□□ 0.8
COMMD2-206ENST00000490008 KNDC1Q76NI1 1749 aa20.03■□□□□ 0.8
COMMD2-206ENST00000490008 NUDT16Q96DE0 195 aaKnown RBP20.03■□□□□ 0.8
COMMD2-206ENST00000490008 CABP2Q9NPB3 220 aa20.03■□□□□ 0.8
COMMD2-206ENST00000490008 HSPA5P11021 654 aaKnown RBP20.02■□□□□ 0.8
COMMD2-206ENST00000490008 TMF1P82094 1093 aa20.02■□□□□ 0.8
COMMD2-206ENST00000490008 BRINP3Q76B58 766 aa20.02■□□□□ 0.8
COMMD2-206ENST00000490008 SIPA1L2Q9P2F8 1722 aaPredicted RBP20■□□□□ 0.79
COMMD2-206ENST00000490008 C1orf167Q5SNV9 1468 aa19.99■□□□□ 0.79
COMMD2-206ENST00000490008 CDCA8Q53HL2 280 aa19.99■□□□□ 0.79
COMMD2-206ENST00000490008 PHF8Q9UPP1 1060 aa19.99■□□□□ 0.79
COMMD2-206ENST00000490008 CCDC61Q9Y6R9 512 aa19.99■□□□□ 0.79
COMMD2-206ENST00000490008 MST1RQ04912 1400 aa19.99■□□□□ 0.79
COMMD2-206ENST00000490008 XIRP1Q702N8 1843 aaKnown RBP19.99■□□□□ 0.79
COMMD2-206ENST00000490008 ILDR1Q86SU0 546 aaPredicted RBP19.98■□□□□ 0.79
COMMD2-206ENST00000490008 PMFBP1Q8TBY8 1022 aa19.98■□□□□ 0.79
COMMD2-206ENST00000490008 TESK2Q96S53 571 aa19.98■□□□□ 0.79
COMMD2-206ENST00000490008 FOXO3O43524 673 aa19.97■□□□□ 0.79
COMMD2-206ENST00000490008 PSME1Q06323 249 aa19.97■□□□□ 0.79
COMMD2-206ENST00000490008 NGDNQ8NEJ9 315 aaKnown RBP19.97■□□□□ 0.79
COMMD2-206ENST00000490008 HSPA1LP34931 641 aa19.95■□□□□ 0.78
COMMD2-206ENST00000490008 TMC1Q8TDI8 760 aa19.95■□□□□ 0.78
COMMD2-206ENST00000490008 ARHGEF28Q8N1W1 1705 aaKnown RBP19.95■□□□□ 0.78
COMMD2-206ENST00000490008 SBNO2Q9Y2G9 1366 aa19.95■□□□□ 0.78
COMMD2-206ENST00000490008 PUS7Q96PZ0 661 aaKnown RBP19.94■□□□□ 0.78
COMMD2-206ENST00000490008 POLR3GLQ9BT43 218 aa19.94■□□□□ 0.78
COMMD2-206ENST00000490008 CABP1Q9NZU7 370 aa19.94■□□□□ 0.78
COMMD2-206ENST00000490008 CDC42BPGQ6DT37 1551 aa19.94■□□□□ 0.78
COMMD2-206ENST00000490008 NALCNQ8IZF0 1738 aa19.93■□□□□ 0.78
COMMD2-206ENST00000490008 DDX17Q92841 729 aaKnown RBP19.93■□□□□ 0.78
COMMD2-206ENST00000490008 PRR36Q9H6K5 1346 aa19.93■□□□□ 0.78
COMMD2-206ENST00000490008 ANKARQ7Z5J8 1434 aa19.93■□□□□ 0.78
COMMD2-206ENST00000490008 KRT28Q7Z3Y7 464 aa19.92■□□□□ 0.78
COMMD2-206ENST00000490008 NPHP3Q7Z494 1330 aa19.92■□□□□ 0.78
COMMD2-206ENST00000490008 PLEKHG3A1L390 1219 aa19.91■□□□□ 0.78
COMMD2-206ENST00000490008 LRRC59Q96AG4 307 aaKnown RBP19.91■□□□□ 0.78
COMMD2-206ENST00000490008 XPCQ01831 940 aaPredicted RBP19.89■□□□□ 0.77
COMMD2-206ENST00000490008 ATAD2Q6PL18 1390 aa19.89■□□□□ 0.77
COMMD2-206ENST00000490008 ADGRB2O60241 1585 aa19.87■□□□□ 0.77
COMMD2-206ENST00000490008 TULP4Q9NRJ4 1543 aa19.87■□□□□ 0.77
COMMD2-206ENST00000490008 ACEP12821 1306 aa19.87■□□□□ 0.77
COMMD2-206ENST00000490008 PAK3O75914 559 aaPredicted RBP19.87■□□□□ 0.77
COMMD2-206ENST00000490008 ZNF692Q9BU19 519 aaPredicted RBP19.87■□□□□ 0.77
COMMD2-206ENST00000490008 QRICH2Q9H0J4 1663 aa19.87■□□□□ 0.77
COMMD2-206ENST00000490008 LMOD2Q6P5Q4 547 aa19.86■□□□□ 0.77
COMMD2-206ENST00000490008 SLC12A5Q9H2X9 1139 aa19.86■□□□□ 0.77
COMMD2-206ENST00000490008 PPIP5K1Q6PFW1 1433 aa19.85■□□□□ 0.77
COMMD2-206ENST00000490008 HDGFL2Q7Z4V5 671 aaPredicted RBP19.85■□□□□ 0.77
COMMD2-206ENST00000490008 TERF2IPQ9NYB0 399 aa19.85■□□□□ 0.77
COMMD2-206ENST00000490008 DISP3Q9P2K9 1392 aa19.84■□□□□ 0.77
COMMD2-206ENST00000490008 SOS2Q07890 1332 aaPredicted RBP19.83■□□□□ 0.77
COMMD2-206ENST00000490008 FMN2Q9NZ56 1722 aa19.83■□□□□ 0.77
COMMD2-206ENST00000490008 ROBO1Q9Y6N7 1651 aa19.83■□□□□ 0.76
COMMD2-206ENST00000490008 ATP7BP35670 1465 aa19.81■□□□□ 0.76
COMMD2-206ENST00000490008 C11orf95C9JLR9 678 aaPredicted RBP19.8■□□□□ 0.76
COMMD2-206ENST00000490008 PLEKHG5O94827 1062 aa19.78■□□□□ 0.76
COMMD2-206ENST00000490008 POLR3AO14802 1390 aaPredicted RBP19.78■□□□□ 0.76
COMMD2-206ENST00000490008 ABTB2Q8N961 1025 aa19.77■□□□□ 0.76
COMMD2-206ENST00000490008 JCADQ9P266 1359 aa19.77■□□□□ 0.76
COMMD2-206ENST00000490008 NINLQ9Y2I6 1382 aa19.77■□□□□ 0.76
COMMD2-206ENST00000490008 SPATA31A3Q5VYP0 1347 aa19.76■□□□□ 0.75
COMMD2-206ENST00000490008 KTN1Q86UP2 1357 aaKnown RBP19.76■□□□□ 0.75
COMMD2-206ENST00000490008 HAP1P54257 671 aaPredicted RBP19.76■□□□□ 0.75
COMMD2-206ENST00000490008 SBNO1A3KN83 1393 aa19.75■□□□□ 0.75
COMMD2-206ENST00000490008 NUTM2BA6NNL0 878 aaPredicted RBP19.75■□□□□ 0.75
COMMD2-206ENST00000490008 NUTM2EB1AL46 878 aaPredicted RBP19.75■□□□□ 0.75
COMMD2-206ENST00000490008 NUTM2AQ8IVF1 878 aaPredicted RBP19.75■□□□□ 0.75
COMMD2-206ENST00000490008 USP32Q8NFA0 1604 aa19.74■□□□□ 0.75
COMMD2-206ENST00000490008 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.74■□□□□ 0.75
COMMD2-206ENST00000490008 KIF7Q2M1P5 1343 aa19.74■□□□□ 0.75
COMMD2-206ENST00000490008 AHDC1Q5TGY3 1603 aaPredicted RBP19.73■□□□□ 0.75
COMMD2-206ENST00000490008 BRD4O60885 1362 aaPredicted RBP19.72■□□□□ 0.75
COMMD2-206ENST00000490008 KIF1AQ12756 1690 aa19.72■□□□□ 0.75
COMMD2-206ENST00000490008 NUTM2GQ5VZR2 741 aa19.72■□□□□ 0.75
COMMD2-206ENST00000490008 PHLPP1O60346 1717 aa19.71■□□□□ 0.75
COMMD2-206ENST00000490008 RGPD8O14715 1765 aaPredicted RBP19.71■□□□□ 0.75
COMMD2-206ENST00000490008 NLRP6P59044 892 aa19.71■□□□□ 0.75
COMMD2-206ENST00000490008 NLRP13Q86W25 1043 aa19.71■□□□□ 0.75
COMMD2-206ENST00000490008 PANK3Q9H999 370 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms