RNA–Protein interactions for RNA: ENST00000489944.1

SEMA6C-208, Transcript of semaphorin 6C, humanhuman

TSL 3

Gene SEMA6C, Length 423 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-208ENST00000489944 YTHDC2Q9H6S0 1430 aaKnown RBP17.43■□□□□ 0.38
SEMA6C-208ENST00000489944 MEX3CQ5U5Q3 659 aaKnown RBP17.41■□□□□ 0.38
SEMA6C-208ENST00000489944 SOS2Q07890 1332 aaPredicted RBP17.41■□□□□ 0.38
SEMA6C-208ENST00000489944 NPHP3Q7Z494 1330 aa17.4■□□□□ 0.38
SEMA6C-208ENST00000489944 DLC1Q96QB1 1528 aa17.39■□□□□ 0.37
SEMA6C-208ENST00000489944 LRP6O75581 1613 aa17.38■□□□□ 0.37
SEMA6C-208ENST00000489944 PNPLA6Q8IY17 1366 aa17.38■□□□□ 0.37
SEMA6C-208ENST00000489944 POTEAQ6S8J7 498 aa17.37■□□□□ 0.37
SEMA6C-208ENST00000489944 STK26Q9P289 416 aa17.37■□□□□ 0.37
SEMA6C-208ENST00000489944 TMEM132EQ6IEE7 984 aa17.35■□□□□ 0.37
SEMA6C-208ENST00000489944 ORAI2Q96SN7 254 aa17.35■□□□□ 0.37
SEMA6C-208ENST00000489944 EIF3AQ14152 1382 aaKnown RBP17.34■□□□□ 0.37
SEMA6C-208ENST00000489944 ESCO1Q5FWF5 840 aa17.34■□□□□ 0.37
SEMA6C-208ENST00000489944 CFAP70Q5T0N1 1121 aa17.34■□□□□ 0.37
SEMA6C-208ENST00000489944 KIF1AQ12756 1690 aa17.33■□□□□ 0.37
SEMA6C-208ENST00000489944 CDK12Q9NYV4 1490 aaPredicted RBP17.33■□□□□ 0.37
SEMA6C-208ENST00000489944 WAPLQ7Z5K2 1190 aa17.33■□□□□ 0.36
SEMA6C-208ENST00000489944 COL22A1Q8NFW1 1626 aaPredicted RBP17.32■□□□□ 0.36
SEMA6C-208ENST00000489944 FMN2Q9NZ56 1722 aa17.32■□□□□ 0.36
SEMA6C-208ENST00000489944 ANKARQ7Z5J8 1434 aa17.31■□□□□ 0.36
SEMA6C-208ENST00000489944 DCAF11Q8TEB1 546 aa17.31■□□□□ 0.36
SEMA6C-208ENST00000489944 ADGRB1O14514 1584 aa17.31■□□□□ 0.36
SEMA6C-208ENST00000489944 ADGRB2O60241 1585 aa17.3■□□□□ 0.36
SEMA6C-208ENST00000489944 PXDNQ92626 1479 aa17.3■□□□□ 0.36
SEMA6C-208ENST00000489944 PLEKHH1Q9ULM0 1364 aa17.29■□□□□ 0.36
SEMA6C-208ENST00000489944 NUTM2BA6NNL0 878 aaPredicted RBP17.29■□□□□ 0.36
SEMA6C-208ENST00000489944 NUTM2EB1AL46 878 aaPredicted RBP17.29■□□□□ 0.36
SEMA6C-208ENST00000489944 NUTM2AQ8IVF1 878 aaPredicted RBP17.29■□□□□ 0.36
SEMA6C-208ENST00000489944 POGKQ9P215 609 aa17.29■□□□□ 0.36
SEMA6C-208ENST00000489944 RXRBP28702 533 aa17.28■□□□□ 0.36
SEMA6C-208ENST00000489944 DDX17Q92841 729 aaKnown RBP17.28■□□□□ 0.36
SEMA6C-208ENST00000489944 PRAM1Q96QH2 718 aa17.28■□□□□ 0.36
SEMA6C-208ENST00000489944 AFF2P51816 1311 aa17.27■□□□□ 0.36
SEMA6C-208ENST00000489944 PSME1Q06323 249 aa17.27■□□□□ 0.36
SEMA6C-208ENST00000489944 FOXO3O43524 673 aa17.26■□□□□ 0.35
SEMA6C-208ENST00000489944 KIAA1210Q9ULL0 1709 aa17.26■□□□□ 0.35
SEMA6C-208ENST00000489944 PHF8Q9UPP1 1060 aa17.25■□□□□ 0.35
SEMA6C-208ENST00000489944 RBM6P78332 1123 aaKnown RBP17.24■□□□□ 0.35
SEMA6C-208ENST00000489944 FNBP4Q8N3X1 1017 aaPredicted RBP17.24■□□□□ 0.35
SEMA6C-208ENST00000489944 NGLY1Q96IV0 654 aa17.24■□□□□ 0.35
SEMA6C-208ENST00000489944 KDM2AQ9Y2K7 1162 aa17.24■□□□□ 0.35
SEMA6C-208ENST00000489944 SBNO1A3KN83 1393 aa17.24■□□□□ 0.35
SEMA6C-208ENST00000489944 SPATA31A3Q5VYP0 1347 aa17.23■□□□□ 0.35
SEMA6C-208ENST00000489944 C8orf37Q96NL8 207 aa17.23■□□□□ 0.35
SEMA6C-208ENST00000489944 ARHGEF10O15013 1369 aa17.21■□□□□ 0.35
SEMA6C-208ENST00000489944 KRT28Q7Z3Y7 464 aa17.21■□□□□ 0.35
SEMA6C-208ENST00000489944 QTRT2Q9H974 415 aaKnown RBP17.21■□□□□ 0.35
SEMA6C-208ENST00000489944 TRPC5Q9UL62 973 aaPredicted RBP17.21■□□□□ 0.35
SEMA6C-208ENST00000489944 TRAK1Q9UPV9 953 aa17.21■□□□□ 0.35
SEMA6C-208ENST00000489944 TULP4Q9NRJ4 1543 aa17.2■□□□□ 0.34
SEMA6C-208ENST00000489944 WASLO00401 505 aaPredicted RBP17.19■□□□□ 0.34
SEMA6C-208ENST00000489944 ADAMTS2O95450 1211 aa17.19■□□□□ 0.34
SEMA6C-208ENST00000489944 TNS3Q68CZ2 1445 aa17.19■□□□□ 0.34
SEMA6C-208ENST00000489944 NUTM2FA1L443 756 aa17.18■□□□□ 0.34
SEMA6C-208ENST00000489944 USP21Q9UK80 565 aa17.18■□□□□ 0.34
SEMA6C-208ENST00000489944 GPRASP1Q5JY77 1395 aa17.17■□□□□ 0.34
SEMA6C-208ENST00000489944 MARF1Q9Y4F3 1742 aaKnown RBP17.17■□□□□ 0.34
SEMA6C-208ENST00000489944 SAFB2Q14151 953 aaKnown RBP eCLIP17.16■□□□□ 0.34
SEMA6C-208ENST00000489944 ARHGEF28Q8N1W1 1705 aaKnown RBP17.15■□□□□ 0.34
SEMA6C-208ENST00000489944 ATRNO75882 1429 aa17.14■□□□□ 0.33
SEMA6C-208ENST00000489944 RGPD8O14715 1765 aaPredicted RBP17.14■□□□□ 0.33
SEMA6C-208ENST00000489944 MINK1Q8N4C8 1332 aaPredicted RBP17.14■□□□□ 0.33
SEMA6C-208ENST00000489944 USP32Q8NFA0 1604 aa17.14■□□□□ 0.33
SEMA6C-208ENST00000489944 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.13■□□□□ 0.33
SEMA6C-208ENST00000489944 XPCQ01831 940 aaPredicted RBP17.13■□□□□ 0.33
SEMA6C-208ENST00000489944 ITSN1Q15811 1721 aa17.13■□□□□ 0.33
SEMA6C-208ENST00000489944 BCL9LQ86UU0 1499 aa17.12■□□□□ 0.33
SEMA6C-208ENST00000489944 SLIT2O94813 1529 aa17.11■□□□□ 0.33
SEMA6C-208ENST00000489944 HAP1P54257 671 aaPredicted RBP17.1■□□□□ 0.33
SEMA6C-208ENST00000489944 UNC5CLQ8IV45 518 aa17.1■□□□□ 0.33
SEMA6C-208ENST00000489944 UPF1Q92900 1129 aaKnown RBP eCLIP17.1■□□□□ 0.33
SEMA6C-208ENST00000489944 RGS12O14924 1447 aa17.1■□□□□ 0.33
SEMA6C-208ENST00000489944 NGDNQ8NEJ9 315 aaKnown RBP17.09■□□□□ 0.33
SEMA6C-208ENST00000489944 HIRIP3Q9BW71 556 aaPredicted RBP17.09■□□□□ 0.33
SEMA6C-208ENST00000489944 CCDC61Q9Y6R9 512 aa17.09■□□□□ 0.33
SEMA6C-208ENST00000489944 PRR36Q9H6K5 1346 aa17.09■□□□□ 0.33
SEMA6C-208ENST00000489944 BRD4O60885 1362 aaPredicted RBP17.09■□□□□ 0.33
SEMA6C-208ENST00000489944 ATP7BP35670 1465 aa17.08■□□□□ 0.32
SEMA6C-208ENST00000489944 ATAD2Q6PL18 1390 aa17.08■□□□□ 0.32
SEMA6C-208ENST00000489944 PMFBP1Q8TBY8 1022 aa17.08■□□□□ 0.32
SEMA6C-208ENST00000489944 NUDT16Q96DE0 195 aaKnown RBP17.08■□□□□ 0.32
SEMA6C-208ENST00000489944 GJD4Q96KN9 370 aaPredicted RBP17.08■□□□□ 0.32
SEMA6C-208ENST00000489944 TRPM3Q9HCF6 1732 aaPredicted RBP17.07■□□□□ 0.32
SEMA6C-208ENST00000489944 NWD2Q9ULI1 1742 aa17.07■□□□□ 0.32
SEMA6C-208ENST00000489944 POLR3AO14802 1390 aaPredicted RBP17.07■□□□□ 0.32
SEMA6C-208ENST00000489944 CENPJQ9HC77 1338 aaPredicted RBP17.07■□□□□ 0.32
SEMA6C-208ENST00000489944 PLEKHG3A1L390 1219 aa17.07■□□□□ 0.32
SEMA6C-208ENST00000489944 L3MBTL2Q969R5 705 aa17.06■□□□□ 0.32
SEMA6C-208ENST00000489944 CDK19Q9BWU1 502 aa17.06■□□□□ 0.32
SEMA6C-208ENST00000489944 ALS2Q96Q42 1657 aa17.06■□□□□ 0.32
SEMA6C-208ENST00000489944 CCDC125Q86Z20 511 aa17.05■□□□□ 0.32
SEMA6C-208ENST00000489944 VPS72Q15906 364 aa17.04■□□□□ 0.32
SEMA6C-208ENST00000489944 NBPF1Q3BBV0 1214 aa17.04■□□□□ 0.32
SEMA6C-208ENST00000489944 LMOD2Q6P5Q4 547 aa17.04■□□□□ 0.32
SEMA6C-208ENST00000489944 ABCA3Q99758 1704 aa17.03■□□□□ 0.32
SEMA6C-208ENST00000489944 TOPAZ1Q8N9V7 1692 aa17.02■□□□□ 0.32
SEMA6C-208ENST00000489944 ONECUT3O60422 494 aaPredicted RBP17.01■□□□□ 0.31
SEMA6C-208ENST00000489944 TRPM1Q7Z4N2 1603 aa17■□□□□ 0.31
SEMA6C-208ENST00000489944 COL14A1Q05707 1796 aaKnown RBP17■□□□□ 0.31
SEMA6C-208ENST00000489944 RALGAPBQ86X10 1494 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms