RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 RGL3Q3MIN7 710 aa23.78■■□□□ 1.4
PLOD3-216ENST00000489927 CDC42BPGQ6DT37 1551 aa23.78■■□□□ 1.4
PLOD3-216ENST00000489927 SPATA31E1Q6ZUB1 1445 aa23.77■■□□□ 1.4
PLOD3-216ENST00000489927 ESCO1Q5FWF5 840 aa23.76■■□□□ 1.39
PLOD3-216ENST00000489927 MPHOSPH9Q99550 1183 aa23.74■■□□□ 1.39
PLOD3-216ENST00000489927 STK26Q9P289 416 aa23.74■■□□□ 1.39
PLOD3-216ENST00000489927 USP21Q9UK80 565 aa23.73■■□□□ 1.39
PLOD3-216ENST00000489927 NPHP3Q7Z494 1330 aa23.73■■□□□ 1.39
PLOD3-216ENST00000489927 ANKRD30BQ9BXX2 1392 aa23.73■■□□□ 1.39
PLOD3-216ENST00000489927 TECPR2O15040 1411 aa23.73■■□□□ 1.39
PLOD3-216ENST00000489927 COL22A1Q8NFW1 1626 aaPredicted RBP23.73■■□□□ 1.39
PLOD3-216ENST00000489927 WAPLQ7Z5K2 1190 aa23.72■■□□□ 1.39
PLOD3-216ENST00000489927 IFT172Q9UG01 1749 aa23.72■■□□□ 1.39
PLOD3-216ENST00000489927 PXDNQ92626 1479 aa23.71■■□□□ 1.39
PLOD3-216ENST00000489927 LRPPRCP42704 1394 aaKnown RBP23.71■■□□□ 1.39
PLOD3-216ENST00000489927 TMEM132EQ6IEE7 984 aa23.71■■□□□ 1.39
PLOD3-216ENST00000489927 FNBP4Q8N3X1 1017 aaPredicted RBP23.7■■□□□ 1.38
PLOD3-216ENST00000489927 MYOM2P54296 1465 aa23.69■■□□□ 1.38
PLOD3-216ENST00000489927 PIK3C2GO75747 1445 aa23.69■■□□□ 1.38
PLOD3-216ENST00000489927 ABCC11Q96J66 1382 aa23.69■■□□□ 1.38
PLOD3-216ENST00000489927 PLEKHH1Q9ULM0 1364 aa23.69■■□□□ 1.38
PLOD3-216ENST00000489927 NUTM2FA1L443 756 aa23.69■■□□□ 1.38
PLOD3-216ENST00000489927 FOXO3O43524 673 aa23.69■■□□□ 1.38
PLOD3-216ENST00000489927 XPCQ01831 940 aaPredicted RBP23.69■■□□□ 1.38
PLOD3-216ENST00000489927 TRPC5Q9UL62 973 aaPredicted RBP23.68■■□□□ 1.38
PLOD3-216ENST00000489927 KNDC1Q76NI1 1749 aa23.65■■□□□ 1.38
PLOD3-216ENST00000489927 ATRNO75882 1429 aa23.65■■□□□ 1.38
PLOD3-216ENST00000489927 YTHDC2Q9H6S0 1430 aaKnown RBP23.64■■□□□ 1.37
PLOD3-216ENST00000489927 ATAD2Q6PL18 1390 aa23.62■■□□□ 1.37
PLOD3-216ENST00000489927 BCL9LQ86UU0 1499 aa23.62■■□□□ 1.37
PLOD3-216ENST00000489927 FMN2Q9NZ56 1722 aa23.61■■□□□ 1.37
PLOD3-216ENST00000489927 C14orf93Q9H972 538 aaKnown RBP23.59■■□□□ 1.37
PLOD3-216ENST00000489927 MARF1Q9Y4F3 1742 aaKnown RBP23.59■■□□□ 1.37
PLOD3-216ENST00000489927 NRXN1Q9ULB1 1477 aa23.57■■□□□ 1.36
PLOD3-216ENST00000489927 SIRT1Q96EB6 747 aa23.57■■□□□ 1.36
PLOD3-216ENST00000489927 KIF1AQ12756 1690 aa23.57■■□□□ 1.36
PLOD3-216ENST00000489927 SPATA31A3Q5VYP0 1347 aa23.57■■□□□ 1.36
PLOD3-216ENST00000489927 CFAP70Q5T0N1 1121 aa23.56■■□□□ 1.36
PLOD3-216ENST00000489927 EP400Q96L91 3159 aa23.55■■□□□ 1.36
PLOD3-216ENST00000489927 ACIN1Q9UKV3 1341 aaKnown RBP23.55■■□□□ 1.36
PLOD3-216ENST00000489927 KRT28Q7Z3Y7 464 aa23.54■■□□□ 1.36
PLOD3-216ENST00000489927 DHX57Q6P158 1386 aaKnown RBP23.53■■□□□ 1.36
PLOD3-216ENST00000489927 GJD4Q96KN9 370 aaPredicted RBP23.53■■□□□ 1.36
PLOD3-216ENST00000489927 SRCAPQ6ZRS2 3230 aa23.51■■□□□ 1.35
PLOD3-216ENST00000489927 PRAM1Q96QH2 718 aa23.51■■□□□ 1.35
PLOD3-216ENST00000489927 PHF8Q9UPP1 1060 aa23.51■■□□□ 1.35
PLOD3-216ENST00000489927 SLIT2O94813 1529 aa23.5■■□□□ 1.35
PLOD3-216ENST00000489927 SAFB2Q14151 953 aaKnown RBP eCLIP23.5■■□□□ 1.35
PLOD3-216ENST00000489927 UNC5CLQ8IV45 518 aa23.5■■□□□ 1.35
PLOD3-216ENST00000489927 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.5■■□□□ 1.35
PLOD3-216ENST00000489927 RGPD8O14715 1765 aaPredicted RBP23.49■■□□□ 1.35
PLOD3-216ENST00000489927 TNS3Q68CZ2 1445 aa23.49■■□□□ 1.35
PLOD3-216ENST00000489927 USP32Q8NFA0 1604 aa23.48■■□□□ 1.35
PLOD3-216ENST00000489927 RAB3GAP2Q9H2M9 1393 aa23.47■■□□□ 1.35
PLOD3-216ENST00000489927 RALGAPBQ86X10 1494 aa23.47■■□□□ 1.35
PLOD3-216ENST00000489927 GLI3P10071 1580 aa23.46■■□□□ 1.35
PLOD3-216ENST00000489927 PSME1Q06323 249 aa23.46■■□□□ 1.35
PLOD3-216ENST00000489927 CABLES1Q8TDN4 633 aa23.46■■□□□ 1.35
PLOD3-216ENST00000489927 HAP1P54257 671 aaPredicted RBP23.45■■□□□ 1.34
PLOD3-216ENST00000489927 DLC1Q96QB1 1528 aa23.44■■□□□ 1.34
PLOD3-216ENST00000489927 POGKQ9P215 609 aa23.44■■□□□ 1.34
PLOD3-216ENST00000489927 SBNO1A3KN83 1393 aa23.43■■□□□ 1.34
PLOD3-216ENST00000489927 PLEKHG5O94827 1062 aa23.43■■□□□ 1.34
PLOD3-216ENST00000489927 CCDC125Q86Z20 511 aa23.43■■□□□ 1.34
PLOD3-216ENST00000489927 LMOD2Q6P5Q4 547 aa23.42■■□□□ 1.34
PLOD3-216ENST00000489927 ADGRB1O14514 1584 aa23.42■■□□□ 1.34
PLOD3-216ENST00000489927 PMFBP1Q8TBY8 1022 aa23.41■■□□□ 1.34
PLOD3-216ENST00000489927 ANKARQ7Z5J8 1434 aa23.41■■□□□ 1.34
PLOD3-216ENST00000489927 ADGRB2O60241 1585 aa23.4■■□□□ 1.34
PLOD3-216ENST00000489927 ARHGEF10O15013 1369 aa23.4■■□□□ 1.34
PLOD3-216ENST00000489927 ZRANB1Q9UGI0 708 aa23.39■■□□□ 1.33
PLOD3-216ENST00000489927 TRAK1Q9UPV9 953 aa23.39■■□□□ 1.33
PLOD3-216ENST00000489927 ABCA3Q99758 1704 aa23.39■■□□□ 1.33
PLOD3-216ENST00000489927 VPS72Q15906 364 aa23.38■■□□□ 1.33
PLOD3-216ENST00000489927 HIRIP3Q9BW71 556 aaPredicted RBP23.38■■□□□ 1.33
PLOD3-216ENST00000489927 PLCH1Q4KWH8 1693 aa23.38■■□□□ 1.33
PLOD3-216ENST00000489927 SEPT12Q8IYM1 358 aa23.35■■□□□ 1.33
PLOD3-216ENST00000489927 DCAF11Q8TEB1 546 aa23.35■■□□□ 1.33
PLOD3-216ENST00000489927 KDM2AQ9Y2K7 1162 aa23.35■■□□□ 1.33
PLOD3-216ENST00000489927 NWD2Q9ULI1 1742 aa23.35■■□□□ 1.33
PLOD3-216ENST00000489927 MINK1Q8N4C8 1332 aaPredicted RBP23.34■■□□□ 1.33
PLOD3-216ENST00000489927 BLMP54132 1417 aaPredicted RBP23.34■■□□□ 1.33
PLOD3-216ENST00000489927 FAM83GA6ND36 823 aa23.34■■□□□ 1.33
PLOD3-216ENST00000489927 CCDC9Q9Y3X0 531 aaKnown RBP23.34■■□□□ 1.33
PLOD3-216ENST00000489927 PRR36Q9H6K5 1346 aa23.33■■□□□ 1.33
PLOD3-216ENST00000489927 BRWD3Q6RI45 1802 aa23.33■■□□□ 1.33
PLOD3-216ENST00000489927 TRPM3Q9HCF6 1732 aaPredicted RBP23.33■■□□□ 1.32
PLOD3-216ENST00000489927 ONECUT3O60422 494 aaPredicted RBP23.32■■□□□ 1.32
PLOD3-216ENST00000489927 TULP4Q9NRJ4 1543 aa23.31■■□□□ 1.32
PLOD3-216ENST00000489927 EIF3AQ14152 1382 aaKnown RBP23.3■■□□□ 1.32
PLOD3-216ENST00000489927 GPRASP1Q5JY77 1395 aa23.3■■□□□ 1.32
PLOD3-216ENST00000489927 WASLO00401 505 aaPredicted RBP23.3■■□□□ 1.32
PLOD3-216ENST00000489927 ALS2Q96Q42 1657 aa23.28■■□□□ 1.32
PLOD3-216ENST00000489927 KRT27Q7Z3Y8 459 aa23.27■■□□□ 1.32
PLOD3-216ENST00000489927 DEFB132Q7Z7B7 95 aa23.27■■□□□ 1.32
PLOD3-216ENST00000489927 STAC3Q96MF2 364 aa23.27■■□□□ 1.32
PLOD3-216ENST00000489927 BTG4Q9NY30 223 aa23.27■■□□□ 1.32
PLOD3-216ENST00000489927 NRAPQ86VF7 1730 aa23.26■■□□□ 1.31
PLOD3-216ENST00000489927 NGDNQ8NEJ9 315 aaKnown RBP23.25■■□□□ 1.31
PLOD3-216ENST00000489927 SF3B2Q13435 895 aaKnown RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms