RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 NUTM2EB1AL46 878 aaPredicted RBP28.81■■■□□ 2.2
TNFRSF1B-202ENST00000489921 WAPLQ7Z5K2 1190 aa28.81■■■□□ 2.2
TNFRSF1B-202ENST00000489921 NUTM2AQ8IVF1 878 aaPredicted RBP28.81■■■□□ 2.2
TNFRSF1B-202ENST00000489921 NRXN1Q9ULB1 1477 aa28.8■■■□□ 2.2
TNFRSF1B-202ENST00000489921 STK26Q9P289 416 aa28.8■■■□□ 2.2
TNFRSF1B-202ENST00000489921 SOS2Q07890 1332 aaPredicted RBP28.79■■■□□ 2.2
TNFRSF1B-202ENST00000489921 PLEKHH1Q9ULM0 1364 aa28.77■■■□□ 2.2
TNFRSF1B-202ENST00000489921 ZNF772Q68DY9 489 aaPredicted RBP28.77■■■□□ 2.2
TNFRSF1B-202ENST00000489921 C14orf93Q9H972 538 aaKnown RBP28.76■■■□□ 2.19
TNFRSF1B-202ENST00000489921 YTHDC2Q9H6S0 1430 aaKnown RBP28.76■■■□□ 2.19
TNFRSF1B-202ENST00000489921 MYOM2P54296 1465 aa28.75■■■□□ 2.19
TNFRSF1B-202ENST00000489921 CFAP70Q5T0N1 1121 aa28.71■■■□□ 2.19
TNFRSF1B-202ENST00000489921 AFF2P51816 1311 aa28.7■■■□□ 2.19
TNFRSF1B-202ENST00000489921 ESCO1Q5FWF5 840 aa28.69■■■□□ 2.18
TNFRSF1B-202ENST00000489921 SIRT1Q96EB6 747 aa28.69■■■□□ 2.18
TNFRSF1B-202ENST00000489921 FMN2Q9NZ56 1722 aa28.69■■■□□ 2.18
TNFRSF1B-202ENST00000489921 PXDNQ92626 1479 aa28.68■■■□□ 2.18
TNFRSF1B-202ENST00000489921 HRCP23327 699 aa28.67■■■□□ 2.18
TNFRSF1B-202ENST00000489921 COL22A1Q8NFW1 1626 aaPredicted RBP28.67■■■□□ 2.18
TNFRSF1B-202ENST00000489921 NUTM2FA1L443 756 aa28.65■■■□□ 2.18
TNFRSF1B-202ENST00000489921 C8orf37Q96NL8 207 aa28.64■■■□□ 2.18
TNFRSF1B-202ENST00000489921 FOXO3O43524 673 aa28.63■■■□□ 2.17
TNFRSF1B-202ENST00000489921 RXRBP28702 533 aa28.63■■■□□ 2.17
TNFRSF1B-202ENST00000489921 NPHP3Q7Z494 1330 aa28.63■■■□□ 2.17
TNFRSF1B-202ENST00000489921 DHX57Q6P158 1386 aaKnown RBP28.62■■■□□ 2.17
TNFRSF1B-202ENST00000489921 RGPD8O14715 1765 aaPredicted RBP28.62■■■□□ 2.17
TNFRSF1B-202ENST00000489921 ADGRB1O14514 1584 aa28.61■■■□□ 2.17
TNFRSF1B-202ENST00000489921 ADAMTS2O95450 1211 aa28.6■■■□□ 2.17
TNFRSF1B-202ENST00000489921 CDK12Q9NYV4 1490 aaPredicted RBP28.59■■■□□ 2.17
TNFRSF1B-202ENST00000489921 XPCQ01831 940 aaPredicted RBP28.59■■■□□ 2.17
TNFRSF1B-202ENST00000489921 QTRT2Q9H974 415 aaKnown RBP28.57■■■□□ 2.16
TNFRSF1B-202ENST00000489921 DLC1Q96QB1 1528 aa28.57■■■□□ 2.16
TNFRSF1B-202ENST00000489921 PRAM1Q96QH2 718 aa28.56■■■□□ 2.16
TNFRSF1B-202ENST00000489921 KIF1AQ12756 1690 aa28.55■■■□□ 2.16
TNFRSF1B-202ENST00000489921 NGLY1Q96IV0 654 aa28.55■■■□□ 2.16
TNFRSF1B-202ENST00000489921 DCAF11Q8TEB1 546 aa28.54■■■□□ 2.16
TNFRSF1B-202ENST00000489921 MARF1Q9Y4F3 1742 aaKnown RBP28.53■■■□□ 2.16
TNFRSF1B-202ENST00000489921 KDM2AQ9Y2K7 1162 aa28.53■■■□□ 2.16
TNFRSF1B-202ENST00000489921 FNBP4Q8N3X1 1017 aaPredicted RBP28.52■■■□□ 2.16
TNFRSF1B-202ENST00000489921 SAFB2Q14151 953 aaKnown RBP eCLIP28.51■■■□□ 2.15
TNFRSF1B-202ENST00000489921 UPF1Q92900 1129 aaKnown RBP eCLIP28.51■■■□□ 2.15
TNFRSF1B-202ENST00000489921 USP32Q8NFA0 1604 aa28.51■■■□□ 2.15
TNFRSF1B-202ENST00000489921 RBM6P78332 1123 aaKnown RBP28.5■■■□□ 2.15
TNFRSF1B-202ENST00000489921 RGS12O14924 1447 aa28.49■■■□□ 2.15
TNFRSF1B-202ENST00000489921 ADGRB2O60241 1585 aa28.49■■■□□ 2.15
TNFRSF1B-202ENST00000489921 SPATA31A3Q5VYP0 1347 aa28.48■■■□□ 2.15
TNFRSF1B-202ENST00000489921 STAC3Q96MF2 364 aa28.47■■■□□ 2.15
TNFRSF1B-202ENST00000489921 USP21Q9UK80 565 aa28.47■■■□□ 2.15
TNFRSF1B-202ENST00000489921 TRAK1Q9UPV9 953 aa28.47■■■□□ 2.15
TNFRSF1B-202ENST00000489921 KRT28Q7Z3Y7 464 aa28.46■■■□□ 2.15
TNFRSF1B-202ENST00000489921 PHF8Q9UPP1 1060 aa28.46■■■□□ 2.15
TNFRSF1B-202ENST00000489921 POGKQ9P215 609 aa28.45■■■□□ 2.14
TNFRSF1B-202ENST00000489921 BCL9LQ86UU0 1499 aa28.44■■■□□ 2.14
TNFRSF1B-202ENST00000489921 ATRNO75882 1429 aa28.43■■■□□ 2.14
TNFRSF1B-202ENST00000489921 ANKARQ7Z5J8 1434 aa28.41■■■□□ 2.14
TNFRSF1B-202ENST00000489921 HIRIP3Q9BW71 556 aaPredicted RBP28.4■■■□□ 2.14
TNFRSF1B-202ENST00000489921 TRPC5Q9UL62 973 aaPredicted RBP28.4■■■□□ 2.14
TNFRSF1B-202ENST00000489921 ARHGEF28Q8N1W1 1705 aaKnown RBP28.38■■■□□ 2.13
TNFRSF1B-202ENST00000489921 TNS3Q68CZ2 1445 aa28.38■■■□□ 2.13
TNFRSF1B-202ENST00000489921 MINK1Q8N4C8 1332 aaPredicted RBP28.37■■■□□ 2.13
TNFRSF1B-202ENST00000489921 PRR36Q9H6K5 1346 aa28.37■■■□□ 2.13
TNFRSF1B-202ENST00000489921 PMFBP1Q8TBY8 1022 aa28.36■■■□□ 2.13
TNFRSF1B-202ENST00000489921 SBNO1A3KN83 1393 aa28.36■■■□□ 2.13
TNFRSF1B-202ENST00000489921 EP400Q96L91 3159 aa28.36■■■□□ 2.13
TNFRSF1B-202ENST00000489921 PSME1Q06323 249 aa28.35■■■□□ 2.13
TNFRSF1B-202ENST00000489921 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.35■■■□□ 2.13
TNFRSF1B-202ENST00000489921 TRPM3Q9HCF6 1732 aaPredicted RBP28.35■■■□□ 2.13
TNFRSF1B-202ENST00000489921 SLIT2O94813 1529 aa28.34■■■□□ 2.13
TNFRSF1B-202ENST00000489921 ABCA3Q99758 1704 aa28.34■■■□□ 2.13
TNFRSF1B-202ENST00000489921 TULP4Q9NRJ4 1543 aa28.33■■■□□ 2.13
TNFRSF1B-202ENST00000489921 WASLO00401 505 aaPredicted RBP28.33■■■□□ 2.13
TNFRSF1B-202ENST00000489921 CABLES1Q8TDN4 633 aa28.32■■■□□ 2.12
TNFRSF1B-202ENST00000489921 KIAA1210Q9ULL0 1709 aa28.32■■■□□ 2.12
TNFRSF1B-202ENST00000489921 ALS2Q96Q42 1657 aa28.29■■■□□ 2.12
TNFRSF1B-202ENST00000489921 UNC5CLQ8IV45 518 aa28.27■■■□□ 2.12
TNFRSF1B-202ENST00000489921 GJD4Q96KN9 370 aaPredicted RBP28.27■■■□□ 2.12
TNFRSF1B-202ENST00000489921 ARHGEF10O15013 1369 aa28.26■■■□□ 2.12
TNFRSF1B-202ENST00000489921 EIF3AQ14152 1382 aaKnown RBP28.26■■■□□ 2.12
TNFRSF1B-202ENST00000489921 GLI3P10071 1580 aa28.26■■■□□ 2.11
TNFRSF1B-202ENST00000489921 NBPF1Q3BBV0 1214 aa28.25■■■□□ 2.11
TNFRSF1B-202ENST00000489921 PLCH1Q4KWH8 1693 aa28.24■■■□□ 2.11
TNFRSF1B-202ENST00000489921 ATP7BP35670 1465 aa28.23■■■□□ 2.11
TNFRSF1B-202ENST00000489921 LMOD2Q6P5Q4 547 aa28.23■■■□□ 2.11
TNFRSF1B-202ENST00000489921 NWD2Q9ULI1 1742 aa28.23■■■□□ 2.11
TNFRSF1B-202ENST00000489921 RALGAPBQ86X10 1494 aa28.22■■■□□ 2.11
TNFRSF1B-202ENST00000489921 PLEKHG5O94827 1062 aa28.22■■■□□ 2.11
TNFRSF1B-202ENST00000489921 ATAD2Q6PL18 1390 aa28.21■■■□□ 2.11
TNFRSF1B-202ENST00000489921 ITSN1Q15811 1721 aa28.21■■■□□ 2.11
TNFRSF1B-202ENST00000489921 CRYBG1Q9Y4K1 1723 aa28.21■■■□□ 2.11
TNFRSF1B-202ENST00000489921 NUDT16Q96DE0 195 aaKnown RBP28.2■■■□□ 2.1
TNFRSF1B-202ENST00000489921 FAM83GA6ND36 823 aa28.19■■■□□ 2.1
TNFRSF1B-202ENST00000489921 GPRASP1Q5JY77 1395 aa28.19■■■□□ 2.1
TNFRSF1B-202ENST00000489921 HAP1P54257 671 aaPredicted RBP28.18■■■□□ 2.1
TNFRSF1B-202ENST00000489921 CDK19Q9BWU1 502 aa28.18■■■□□ 2.1
TNFRSF1B-202ENST00000489921 TOPAZ1Q8N9V7 1692 aa28.17■■■□□ 2.1
TNFRSF1B-202ENST00000489921 BRWD3Q6RI45 1802 aa28.16■■■□□ 2.1
TNFRSF1B-202ENST00000489921 NGDNQ8NEJ9 315 aaKnown RBP28.15■■■□□ 2.1
TNFRSF1B-202ENST00000489921 VPS72Q15906 364 aa28.14■■■□□ 2.1
TNFRSF1B-202ENST00000489921 NRAPQ86VF7 1730 aa28.14■■■□□ 2.1
TNFRSF1B-202ENST00000489921 L3MBTL2Q969R5 705 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms