RNA–Protein interactions for RNA: ENST00000489870.1

CCT3-213, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 827 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-213ENST00000489870 CDK12Q9NYV4 1490 aaPredicted RBP14.09□□□□□ -0.15
CCT3-213ENST00000489870 NALCNQ8IZF0 1738 aa14.09□□□□□ -0.15
CCT3-213ENST00000489870 NPHP3Q7Z494 1330 aa14.09□□□□□ -0.15
CCT3-213ENST00000489870 ADGRF5Q8IZF2 1346 aa14.09□□□□□ -0.15
CCT3-213ENST00000489870 RXRBP28702 533 aa14.08□□□□□ -0.16
CCT3-213ENST00000489870 NCBP3Q53F19 620 aaKnown RBP14.07□□□□□ -0.16
CCT3-213ENST00000489870 PNPLA6Q8IY17 1366 aa14.07□□□□□ -0.16
CCT3-213ENST00000489870 PIK3C2GO75747 1445 aa14.07□□□□□ -0.16
CCT3-213ENST00000489870 LRP6O75581 1613 aa14.06□□□□□ -0.16
CCT3-213ENST00000489870 IFT172Q9UG01 1749 aa14.06□□□□□ -0.16
CCT3-213ENST00000489870 DHX57Q6P158 1386 aaKnown RBP14.06□□□□□ -0.16
CCT3-213ENST00000489870 CDC42BPGQ6DT37 1551 aa14.05□□□□□ -0.16
CCT3-213ENST00000489870 ORAI2Q96SN7 254 aa14.05□□□□□ -0.16
CCT3-213ENST00000489870 NRXN1Q9ULB1 1477 aa14.05□□□□□ -0.16
CCT3-213ENST00000489870 RBM6P78332 1123 aaKnown RBP14.04□□□□□ -0.16
CCT3-213ENST00000489870 NGLY1Q96IV0 654 aa14.04□□□□□ -0.16
CCT3-213ENST00000489870 MYOM2P54296 1465 aa14.04□□□□□ -0.16
CCT3-213ENST00000489870 NUTM2BA6NNL0 878 aaPredicted RBP14.03□□□□□ -0.16
CCT3-213ENST00000489870 NUTM2EB1AL46 878 aaPredicted RBP14.03□□□□□ -0.16
CCT3-213ENST00000489870 ESCO1Q5FWF5 840 aa14.03□□□□□ -0.16
CCT3-213ENST00000489870 NUTM2AQ8IVF1 878 aaPredicted RBP14.03□□□□□ -0.16
CCT3-213ENST00000489870 AFF2P51816 1311 aa14.03□□□□□ -0.16
CCT3-213ENST00000489870 YTHDC2Q9H6S0 1430 aaKnown RBP14.03□□□□□ -0.16
CCT3-213ENST00000489870 KNDC1Q76NI1 1749 aa14.03□□□□□ -0.16
CCT3-213ENST00000489870 RAB3GAP2Q9H2M9 1393 aa14.02□□□□□ -0.17
CCT3-213ENST00000489870 FNBP4Q8N3X1 1017 aaPredicted RBP14.02□□□□□ -0.17
CCT3-213ENST00000489870 QTRT2Q9H974 415 aaKnown RBP14.02□□□□□ -0.17
CCT3-213ENST00000489870 KCNA4P22459 653 aa14□□□□□ -0.17
CCT3-213ENST00000489870 WAPLQ7Z5K2 1190 aa14□□□□□ -0.17
CCT3-213ENST00000489870 STK26Q9P289 416 aa14□□□□□ -0.17
CCT3-213ENST00000489870 PSME1Q06323 249 aa13.99□□□□□ -0.17
CCT3-213ENST00000489870 TMEM132EQ6IEE7 984 aa13.99□□□□□ -0.17
CCT3-213ENST00000489870 COL22A1Q8NFW1 1626 aaPredicted RBP13.99□□□□□ -0.17
CCT3-213ENST00000489870 FOXO3O43524 673 aa13.98□□□□□ -0.17
CCT3-213ENST00000489870 DDX17Q92841 729 aaKnown RBP13.98□□□□□ -0.17
CCT3-213ENST00000489870 C8orf37Q96NL8 207 aa13.98□□□□□ -0.17
CCT3-213ENST00000489870 TRPC5Q9UL62 973 aaPredicted RBP13.98□□□□□ -0.17
CCT3-213ENST00000489870 DLC1Q96QB1 1528 aa13.98□□□□□ -0.17
CCT3-213ENST00000489870 CFAP70Q5T0N1 1121 aa13.97□□□□□ -0.17
CCT3-213ENST00000489870 UPF1Q92900 1129 aaKnown RBP eCLIP13.97□□□□□ -0.17
CCT3-213ENST00000489870 EIF3AQ14152 1382 aaKnown RBP13.96□□□□□ -0.17
CCT3-213ENST00000489870 PXDNQ92626 1479 aa13.96□□□□□ -0.17
CCT3-213ENST00000489870 SPATA31A3Q5VYP0 1347 aa13.95□□□□□ -0.18
CCT3-213ENST00000489870 KIF1AQ12756 1690 aa13.95□□□□□ -0.18
CCT3-213ENST00000489870 USP21Q9UK80 565 aa13.95□□□□□ -0.18
CCT3-213ENST00000489870 ANKARQ7Z5J8 1434 aa13.95□□□□□ -0.18
CCT3-213ENST00000489870 ADAMTS2O95450 1211 aa13.94□□□□□ -0.18
CCT3-213ENST00000489870 HOXD11P31277 338 aaPredicted RBP13.94□□□□□ -0.18
CCT3-213ENST00000489870 KRT28Q7Z3Y7 464 aa13.94□□□□□ -0.18
CCT3-213ENST00000489870 CCDC125Q86Z20 511 aa13.94□□□□□ -0.18
CCT3-213ENST00000489870 FMN2Q9NZ56 1722 aa13.94□□□□□ -0.18
CCT3-213ENST00000489870 POGKQ9P215 609 aa13.94□□□□□ -0.18
CCT3-213ENST00000489870 PHF8Q9UPP1 1060 aa13.94□□□□□ -0.18
CCT3-213ENST00000489870 SBNO1A3KN83 1393 aa13.94□□□□□ -0.18
CCT3-213ENST00000489870 RNF216Q9NWF9 866 aaPredicted RBP13.93□□□□□ -0.18
CCT3-213ENST00000489870 DCAF11Q8TEB1 546 aa13.92□□□□□ -0.18
CCT3-213ENST00000489870 PRAM1Q96QH2 718 aa13.92□□□□□ -0.18
CCT3-213ENST00000489870 PLEKHH1Q9ULM0 1364 aa13.92□□□□□ -0.18
CCT3-213ENST00000489870 ARHGEF10O15013 1369 aa13.91□□□□□ -0.18
CCT3-213ENST00000489870 NPM3O75607 178 aaKnown RBP13.9□□□□□ -0.18
CCT3-213ENST00000489870 MARF1Q9Y4F3 1742 aaKnown RBP13.9□□□□□ -0.18
CCT3-213ENST00000489870 ATRNO75882 1429 aa13.9□□□□□ -0.19
CCT3-213ENST00000489870 ADGRB1O14514 1584 aa13.89□□□□□ -0.19
CCT3-213ENST00000489870 ADGRB2O60241 1585 aa13.88□□□□□ -0.19
CCT3-213ENST00000489870 BCL9LQ86UU0 1499 aa13.88□□□□□ -0.19
CCT3-213ENST00000489870 ATAD2Q6PL18 1390 aa13.88□□□□□ -0.19
CCT3-213ENST00000489870 UNC5CLQ8IV45 518 aa13.88□□□□□ -0.19
CCT3-213ENST00000489870 GJD4Q96KN9 370 aaPredicted RBP13.88□□□□□ -0.19
CCT3-213ENST00000489870 NUTM2FA1L443 756 aa13.87□□□□□ -0.19
CCT3-213ENST00000489870 WASLO00401 505 aaPredicted RBP13.87□□□□□ -0.19
CCT3-213ENST00000489870 GPRASP1Q5JY77 1395 aa13.86□□□□□ -0.19
CCT3-213ENST00000489870 ONECUT3O60422 494 aaPredicted RBP13.86□□□□□ -0.19
CCT3-213ENST00000489870 TRAK1Q9UPV9 953 aa13.86□□□□□ -0.19
CCT3-213ENST00000489870 KDM2AQ9Y2K7 1162 aa13.86□□□□□ -0.19
CCT3-213ENST00000489870 RGS12O14924 1447 aa13.86□□□□□ -0.19
CCT3-213ENST00000489870 TNS3Q68CZ2 1445 aa13.86□□□□□ -0.19
CCT3-213ENST00000489870 SLIT2O94813 1529 aa13.85□□□□□ -0.19
CCT3-213ENST00000489870 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.85□□□□□ -0.19
CCT3-213ENST00000489870 RGPD8O14715 1765 aaPredicted RBP13.84□□□□□ -0.19
CCT3-213ENST00000489870 XPCQ01831 940 aaPredicted RBP13.84□□□□□ -0.19
CCT3-213ENST00000489870 KIAA1210Q9ULL0 1709 aa13.84□□□□□ -0.19
CCT3-213ENST00000489870 HAP1P54257 671 aaPredicted RBP13.83□□□□□ -0.2
CCT3-213ENST00000489870 VPS72Q15906 364 aa13.83□□□□□ -0.2
CCT3-213ENST00000489870 CACNB1Q02641 598 aaPredicted RBP13.82□□□□□ -0.2
CCT3-213ENST00000489870 SAFB2Q14151 953 aaKnown RBP eCLIP13.82□□□□□ -0.2
CCT3-213ENST00000489870 TULP4Q9NRJ4 1543 aa13.81□□□□□ -0.2
CCT3-213ENST00000489870 DCAF8L1A6NGE4 600 aa13.81□□□□□ -0.2
CCT3-213ENST00000489870 CCDC61Q9Y6R9 512 aa13.81□□□□□ -0.2
CCT3-213ENST00000489870 BRD4O60885 1362 aaPredicted RBP13.81□□□□□ -0.2
CCT3-213ENST00000489870 NWD2Q9ULI1 1742 aa13.81□□□□□ -0.2
CCT3-213ENST00000489870 NGDNQ8NEJ9 315 aaKnown RBP13.8□□□□□ -0.2
CCT3-213ENST00000489870 USP32Q8NFA0 1604 aa13.79□□□□□ -0.2
CCT3-213ENST00000489870 PLEKHG3A1L390 1219 aa13.79□□□□□ -0.2
CCT3-213ENST00000489870 PMFBP1Q8TBY8 1022 aa13.79□□□□□ -0.2
CCT3-213ENST00000489870 NUDT16Q96DE0 195 aaKnown RBP13.79□□□□□ -0.2
CCT3-213ENST00000489870 MINK1Q8N4C8 1332 aaPredicted RBP13.79□□□□□ -0.2
CCT3-213ENST00000489870 FAM83GA6ND36 823 aa13.77□□□□□ -0.21
CCT3-213ENST00000489870 ITSN1Q15811 1721 aa13.77□□□□□ -0.21
CCT3-213ENST00000489870 LMOD2Q6P5Q4 547 aa13.77□□□□□ -0.21
CCT3-213ENST00000489870 HIRIP3Q9BW71 556 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms