RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 FMNL1O95466 1100 aaPredicted RBP7.91□□□□□ -1.14
DEPDC1-204ENST00000489862 SLC10A3P09131 477 aa7.9□□□□□ -1.14
DEPDC1-204ENST00000489862 TRIM46Q7Z4K8 759 aa7.9□□□□□ -1.14
DEPDC1-204ENST00000489862 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.89□□□□□ -1.15
DEPDC1-204ENST00000489862 ADAMTS8Q9UP79 889 aa7.89□□□□□ -1.15
DEPDC1-204ENST00000489862 CAPN5O15484 640 aaPredicted RBP7.89□□□□□ -1.15
DEPDC1-204ENST00000489862 BMP1P13497 986 aa7.89□□□□□ -1.15
DEPDC1-204ENST00000489862 KRTAP9-2Q9BYQ4 174 aa7.89□□□□□ -1.15
DEPDC1-204ENST00000489862 RCCD1A6NED2 376 aa7.88□□□□□ -1.15
DEPDC1-204ENST00000489862 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.88□□□□□ -1.15
DEPDC1-204ENST00000489862 FAM160A2Q8N612 972 aaPredicted RBP7.87□□□□□ -1.15
DEPDC1-204ENST00000489862 SPRYD3Q8NCJ5 442 aa7.87□□□□□ -1.15
DEPDC1-204ENST00000489862 KRTAP9-6A0A140TA67 174 aa7.85□□□□□ -1.15
DEPDC1-204ENST00000489862 ADAM23O75077 832 aa7.85□□□□□ -1.15
DEPDC1-204ENST00000489862 KANK3Q6NY19 840 aa7.85□□□□□ -1.15
DEPDC1-204ENST00000489862 THAP11Q96EK4 314 aa7.85□□□□□ -1.15
DEPDC1-204ENST00000489862 CFAP44Q96MT7 982 aa7.85□□□□□ -1.15
DEPDC1-204ENST00000489862 ALDH1A1P00352 501 aa7.85□□□□□ -1.15
DEPDC1-204ENST00000489862 PAXIP1Q6ZW49 1069 aaPredicted RBP7.85□□□□□ -1.15
DEPDC1-204ENST00000489862 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.84□□□□□ -1.15
DEPDC1-204ENST00000489862 RC3H1Q5TC82 1133 aaKnown RBP7.84□□□□□ -1.15
DEPDC1-204ENST00000489862 SALL2Q9Y467 1007 aaPredicted RBP7.84□□□□□ -1.15
DEPDC1-204ENST00000489862 MSS51Q4VC12 460 aa7.83□□□□□ -1.16
DEPDC1-204ENST00000489862 MORN1Q5T089 497 aa7.83□□□□□ -1.16
DEPDC1-204ENST00000489862 KRTAP1-3Q8IUG1 177 aa7.83□□□□□ -1.16
DEPDC1-204ENST00000489862 ZFP42Q96MM3 310 aa7.83□□□□□ -1.16
DEPDC1-204ENST00000489862 ARIH1Q9Y4X5 557 aaPredicted RBP7.83□□□□□ -1.16
DEPDC1-204ENST00000489862 IRS1P35568 1242 aa7.82□□□□□ -1.16
DEPDC1-204ENST00000489862 ADGRG1Q9Y653 693 aa7.82□□□□□ -1.16
DEPDC1-204ENST00000489862 WNT7BP56706 349 aa7.81□□□□□ -1.16
DEPDC1-204ENST00000489862 PRDM9Q9NQV7 894 aa7.81□□□□□ -1.16
DEPDC1-204ENST00000489862 WASF2Q9Y6W5 498 aa7.81□□□□□ -1.16
DEPDC1-204ENST00000489862 FECHP22830 423 aa7.8□□□□□ -1.16
DEPDC1-204ENST00000489862 SCARF1Q14162 830 aa7.8□□□□□ -1.16
DEPDC1-204ENST00000489862 ATP6V1AP38606 617 aa7.79□□□□□ -1.16
DEPDC1-204ENST00000489862 E2F4Q16254 413 aa7.78□□□□□ -1.16
DEPDC1-204ENST00000489862 MSTNO14793 375 aa7.77□□□□□ -1.17
DEPDC1-204ENST00000489862 MARSP56192 900 aaKnown RBP7.77□□□□□ -1.17
DEPDC1-204ENST00000489862 BRICD5Q6PL45 260 aa7.77□□□□□ -1.17
DEPDC1-204ENST00000489862 SCARF2Q96GP6 870 aaPredicted RBP7.76□□□□□ -1.17
DEPDC1-204ENST00000489862 SLC27A5Q9Y2P5 690 aa7.76□□□□□ -1.17
DEPDC1-204ENST00000489862 SVOPQ8N4V2 548 aa7.74□□□□□ -1.17
DEPDC1-204ENST00000489862 MMP16P51512 607 aa7.73□□□□□ -1.17
DEPDC1-204ENST00000489862 FUT2Q10981 343 aa7.73□□□□□ -1.17
DEPDC1-204ENST00000489862 MRPL14Q6P1L8 145 aaKnown RBP7.73□□□□□ -1.17
DEPDC1-204ENST00000489862 PPFIA3O75145 1194 aa7.72□□□□□ -1.17
DEPDC1-204ENST00000489862 SKOR1P84550 965 aa7.72□□□□□ -1.17
DEPDC1-204ENST00000489862 Q8N3U1 123 aa7.72□□□□□ -1.17
DEPDC1-204ENST00000489862 CNTNAP3BQ96NU0 1288 aa7.72□□□□□ -1.17
DEPDC1-204ENST00000489862 CNTNAP3Q9BZ76 1288 aa7.72□□□□□ -1.17
DEPDC1-204ENST00000489862 PTGDRQ13258 359 aa7.71□□□□□ -1.17
DEPDC1-204ENST00000489862 RDH13Q8NBN7 331 aa7.71□□□□□ -1.17
DEPDC1-204ENST00000489862 OATP04181 439 aa7.7□□□□□ -1.18
DEPDC1-204ENST00000489862 GRIPAP1Q4V328 841 aa7.7□□□□□ -1.18
DEPDC1-204ENST00000489862 Q3C1V9 767 aa7.7□□□□□ -1.18
DEPDC1-204ENST00000489862 ZNF385CQ66K41 422 aaPredicted RBP7.7□□□□□ -1.18
DEPDC1-204ENST00000489862 EHBP1Q8NDI1 1231 aa7.7□□□□□ -1.18
DEPDC1-204ENST00000489862 MAN1A2O60476 641 aa7.69□□□□□ -1.18
DEPDC1-204ENST00000489862 CCDC24Q8N4L8 307 aa7.69□□□□□ -1.18
DEPDC1-204ENST00000489862 PURBQ96QR8 312 aaKnown RBP7.69□□□□□ -1.18
DEPDC1-204ENST00000489862 TSHZ2Q9NRE2 1034 aa7.69□□□□□ -1.18
DEPDC1-204ENST00000489862 BTBD11A6QL63 1104 aa7.68□□□□□ -1.18
DEPDC1-204ENST00000489862 SOBPA7XYQ1 873 aa7.68□□□□□ -1.18
DEPDC1-204ENST00000489862 SIAH2O43255 324 aa7.68□□□□□ -1.18
DEPDC1-204ENST00000489862 LCE3BQ5TA77 95 aa7.68□□□□□ -1.18
DEPDC1-204ENST00000489862 K7ELQ4 463 aaPredicted RBP7.67□□□□□ -1.18
DEPDC1-204ENST00000489862 FAM161AQ3B820 660 aa7.67□□□□□ -1.18
DEPDC1-204ENST00000489862 RNF19BQ6ZMZ0 732 aa7.67□□□□□ -1.18
DEPDC1-204ENST00000489862 GALNT6Q8NCL4 622 aa7.67□□□□□ -1.18
DEPDC1-204ENST00000489862 WDR70Q9NW82 654 aa7.67□□□□□ -1.18
DEPDC1-204ENST00000489862 SPOCK3Q9BQ16 436 aa7.66□□□□□ -1.18
DEPDC1-204ENST00000489862 DXOO77932 396 aaKnown RBP7.65□□□□□ -1.18
DEPDC1-204ENST00000489862 KRT76Q01546 638 aa7.65□□□□□ -1.18
DEPDC1-204ENST00000489862 PXYLP1Q8TE99 480 aa7.65□□□□□ -1.18
DEPDC1-204ENST00000489862 ARHGEF15O94989 841 aa7.64□□□□□ -1.19
DEPDC1-204ENST00000489862 PLA2G4EQ3MJ16 856 aa7.64□□□□□ -1.19
DEPDC1-204ENST00000489862 PLEKHG3A1L390 1219 aa7.62□□□□□ -1.19
DEPDC1-204ENST00000489862 GCGRP47871 477 aa7.62□□□□□ -1.19
DEPDC1-204ENST00000489862 COL25A1Q9BXS0 654 aaPredicted RBP7.62□□□□□ -1.19
DEPDC1-204ENST00000489862 DAXXQ9UER7 740 aaPredicted RBP7.62□□□□□ -1.19
DEPDC1-204ENST00000489862 USB1Q9BQ65 265 aaKnown RBP7.61□□□□□ -1.19
DEPDC1-204ENST00000489862 DDX11L8A8MPP1 907 aa7.6□□□□□ -1.19
DEPDC1-204ENST00000489862 PHF20L1A8MW92 1017 aa7.6□□□□□ -1.19
DEPDC1-204ENST00000489862 SULF1Q8IWU6 871 aa7.6□□□□□ -1.19
DEPDC1-204ENST00000489862 GPR161Q8N6U8 529 aaKnown RBP7.6□□□□□ -1.19
DEPDC1-204ENST00000489862 ADH1CP00326 375 aa7.59□□□□□ -1.19
DEPDC1-204ENST00000489862 SLURP2P0DP57 97 aa7.59□□□□□ -1.19
DEPDC1-204ENST00000489862 PLCB2Q00722 1185 aa7.59□□□□□ -1.19
DEPDC1-204ENST00000489862 NNTQ13423 1086 aa7.58□□□□□ -1.2
DEPDC1-204ENST00000489862 WDR4P57081 412 aaKnown RBP7.57□□□□□ -1.2
DEPDC1-204ENST00000489862 MAP3K10Q02779 954 aa7.57□□□□□ -1.2
DEPDC1-204ENST00000489862 NUTM2FA1L443 756 aa7.56□□□□□ -1.2
DEPDC1-204ENST00000489862 FCHSD2O94868 740 aa7.56□□□□□ -1.2
DEPDC1-204ENST00000489862 WHAMMQ8TF30 809 aa7.56□□□□□ -1.2
DEPDC1-204ENST00000489862 DCAF5Q96JK2 942 aa7.56□□□□□ -1.2
DEPDC1-204ENST00000489862 UPP2O95045 317 aa7.56□□□□□ -1.2
DEPDC1-204ENST00000489862 TIMP2P16035 220 aa7.56□□□□□ -1.2
DEPDC1-204ENST00000489862 METTL3Q86U44 580 aaKnown RBP7.56□□□□□ -1.2
DEPDC1-204ENST00000489862 PROCP04070 461 aa7.55□□□□□ -1.2
DEPDC1-204ENST00000489862 ENAMQ9NRM1 1142 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 140.2 ms