RNA–Protein interactions for RNA: ENST00000489698.1

COPS9-203, Transcript of COP9 signalosome subunit 9, humanhuman

TSL 2

Gene COPS9, Length 640 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9-203ENST00000489698 UPF1Q92900 1129 aaKnown RBP eCLIP35.61■■■■□ 3.29
COPS9-203ENST00000489698 ABCC11Q96J66 1382 aa35.61■■■■□ 3.29
COPS9-203ENST00000489698 MYOM2P54296 1465 aa35.6■■■■□ 3.29
COPS9-203ENST00000489698 RXRBP28702 533 aa35.6■■■■□ 3.29
COPS9-203ENST00000489698 ORAI2Q96SN7 254 aa35.6■■■■□ 3.29
COPS9-203ENST00000489698 TECPR2O15040 1411 aa35.59■■■■□ 3.29
COPS9-203ENST00000489698 YTHDC2Q9H6S0 1430 aaKnown RBP35.59■■■■□ 3.29
COPS9-203ENST00000489698 NRXN1Q9ULB1 1477 aa35.58■■■■□ 3.29
COPS9-203ENST00000489698 LRRC59Q96AG4 307 aaKnown RBP35.57■■■■□ 3.28
COPS9-203ENST00000489698 KNDC1Q76NI1 1749 aa35.57■■■■□ 3.28
COPS9-203ENST00000489698 KDM2AQ9Y2K7 1162 aa35.56■■■■□ 3.28
COPS9-203ENST00000489698 AFF2P51816 1311 aa35.56■■■■□ 3.28
COPS9-203ENST00000489698 PLEKHH1Q9ULM0 1364 aa35.55■■■■□ 3.28
COPS9-203ENST00000489698 DHX57Q6P158 1386 aaKnown RBP35.53■■■■□ 3.28
COPS9-203ENST00000489698 DCAF11Q8TEB1 546 aa35.53■■■■□ 3.28
COPS9-203ENST00000489698 LAMC1P11047 1609 aa35.53■■■■□ 3.28
COPS9-203ENST00000489698 CDC42BPGQ6DT37 1551 aa35.52■■■■□ 3.28
COPS9-203ENST00000489698 CDK12Q9NYV4 1490 aaPredicted RBP35.52■■■■□ 3.28
COPS9-203ENST00000489698 NUTM2FA1L443 756 aa35.51■■■■□ 3.28
COPS9-203ENST00000489698 ESCO1Q5FWF5 840 aa35.51■■■■□ 3.28
COPS9-203ENST00000489698 PNPLA6Q8IY17 1366 aa35.47■■■■□ 3.27
COPS9-203ENST00000489698 SIRT1Q96EB6 747 aa35.46■■■■□ 3.27
COPS9-203ENST00000489698 C8orf37Q96NL8 207 aa35.46■■■■□ 3.27
COPS9-203ENST00000489698 SAFB2Q14151 953 aaKnown RBP eCLIP35.43■■■■□ 3.26
COPS9-203ENST00000489698 SOS2Q07890 1332 aaPredicted RBP35.42■■■■□ 3.26
COPS9-203ENST00000489698 PRAM1Q96QH2 718 aa35.42■■■■□ 3.26
COPS9-203ENST00000489698 POGKQ9P215 609 aa35.4■■■■□ 3.26
COPS9-203ENST00000489698 STAC3Q96MF2 364 aa35.38■■■■□ 3.25
COPS9-203ENST00000489698 RGS12O14924 1447 aa35.38■■■■□ 3.25
COPS9-203ENST00000489698 NPHP3Q7Z494 1330 aa35.37■■■■□ 3.25
COPS9-203ENST00000489698 FOXO3O43524 673 aa35.37■■■■□ 3.25
COPS9-203ENST00000489698 QTRT2Q9H974 415 aaKnown RBP35.37■■■■□ 3.25
COPS9-203ENST00000489698 TRAK1Q9UPV9 953 aa35.37■■■■□ 3.25
COPS9-203ENST00000489698 FMN2Q9NZ56 1722 aa35.37■■■■□ 3.25
COPS9-203ENST00000489698 RBM6P78332 1123 aaKnown RBP35.35■■■■□ 3.25
COPS9-203ENST00000489698 XPCQ01831 940 aaPredicted RBP35.35■■■■□ 3.25
COPS9-203ENST00000489698 ADGRB1O14514 1584 aa35.34■■■■□ 3.25
COPS9-203ENST00000489698 ADAMTS2O95450 1211 aa35.33■■■■□ 3.25
COPS9-203ENST00000489698 DLC1Q96QB1 1528 aa35.32■■■■□ 3.24
COPS9-203ENST00000489698 NGLY1Q96IV0 654 aa35.31■■■■□ 3.24
COPS9-203ENST00000489698 RGPD8O14715 1765 aaPredicted RBP35.27■■■■□ 3.24
COPS9-203ENST00000489698 PXDNQ92626 1479 aa35.27■■■■□ 3.24
COPS9-203ENST00000489698 HIRIP3Q9BW71 556 aaPredicted RBP35.24■■■■□ 3.23
COPS9-203ENST00000489698 MINK1Q8N4C8 1332 aaPredicted RBP35.23■■■■□ 3.23
COPS9-203ENST00000489698 KIF1AQ12756 1690 aa35.23■■■■□ 3.23
COPS9-203ENST00000489698 PHF8Q9UPP1 1060 aa35.22■■■■□ 3.23
COPS9-203ENST00000489698 KRT28Q7Z3Y7 464 aa35.19■■■■□ 3.22
COPS9-203ENST00000489698 USP21Q9UK80 565 aa35.19■■■■□ 3.22
COPS9-203ENST00000489698 COL22A1Q8NFW1 1626 aaPredicted RBP35.18■■■■□ 3.22
COPS9-203ENST00000489698 ADGRB2O60241 1585 aa35.15■■■■□ 3.22
COPS9-203ENST00000489698 PMFBP1Q8TBY8 1022 aa35.14■■■■□ 3.22
COPS9-203ENST00000489698 TRPC5Q9UL62 973 aaPredicted RBP35.14■■■■□ 3.22
COPS9-203ENST00000489698 ATAD2Q6PL18 1390 aa35.13■■■■□ 3.21
COPS9-203ENST00000489698 SPATA31A3Q5VYP0 1347 aa35.12■■■■□ 3.21
COPS9-203ENST00000489698 PSME1Q06323 249 aa35.12■■■■□ 3.21
COPS9-203ENST00000489698 ANKARQ7Z5J8 1434 aa35.12■■■■□ 3.21
COPS9-203ENST00000489698 ARHGEF28Q8N1W1 1705 aaKnown RBP35.11■■■■□ 3.21
COPS9-203ENST00000489698 USP32Q8NFA0 1604 aa35.1■■■■□ 3.21
COPS9-203ENST00000489698 WASLO00401 505 aaPredicted RBP35.1■■■■□ 3.21
COPS9-203ENST00000489698 FNBP4Q8N3X1 1017 aaPredicted RBP35.1■■■■□ 3.21
COPS9-203ENST00000489698 SIN3AQ96ST3 1273 aa35.1■■■■□ 3.21
COPS9-203ENST00000489698 KIAA1210Q9ULL0 1709 aa35.09■■■■□ 3.21
COPS9-203ENST00000489698 ATRNO75882 1429 aa35.08■■■■□ 3.21
COPS9-203ENST00000489698 NBPF1Q3BBV0 1214 aa35.08■■■■□ 3.21
COPS9-203ENST00000489698 EIF3AQ14152 1382 aaKnown RBP35.08■■■■□ 3.21
COPS9-203ENST00000489698 NEUROD1Q13562 356 aa35.07■■■■□ 3.2
COPS9-203ENST00000489698 PLEKHG5O94827 1062 aa35.06■■■■□ 3.2
COPS9-203ENST00000489698 LMOD2Q6P5Q4 547 aa35.06■■■■□ 3.2
COPS9-203ENST00000489698 L3MBTL2Q969R5 705 aa35.05■■■■□ 3.2
COPS9-203ENST00000489698 PRR36Q9H6K5 1346 aa35.05■■■■□ 3.2
COPS9-203ENST00000489698 MARF1Q9Y4F3 1742 aaKnown RBP35.04■■■■□ 3.2
COPS9-203ENST00000489698 TULP4Q9NRJ4 1543 aa35.03■■■■□ 3.2
COPS9-203ENST00000489698 TNS3Q68CZ2 1445 aa35.03■■■■□ 3.2
COPS9-203ENST00000489698 HAP1P54257 671 aaPredicted RBP35.01■■■■□ 3.2
COPS9-203ENST00000489698 SBNO1A3KN83 1393 aa35■■■■□ 3.19
COPS9-203ENST00000489698 BCL9LQ86UU0 1499 aa34.97■■■■□ 3.19
COPS9-203ENST00000489698 CABLES1Q8TDN4 633 aa34.97■■■■□ 3.19
COPS9-203ENST00000489698 NGDNQ8NEJ9 315 aaKnown RBP34.96■■■■□ 3.19
COPS9-203ENST00000489698 CDK19Q9BWU1 502 aa34.96■■■■□ 3.19
COPS9-203ENST00000489698 GPRASP1Q5JY77 1395 aa34.96■■■■□ 3.19
COPS9-203ENST00000489698 NUDT16Q96DE0 195 aaKnown RBP34.95■■■■□ 3.19
COPS9-203ENST00000489698 SRCAPQ6ZRS2 3230 aa34.94■■■■□ 3.18
COPS9-203ENST00000489698 ARHGEF10O15013 1369 aa34.94■■■■□ 3.18
COPS9-203ENST00000489698 EP400Q96L91 3159 aa34.93■■■■□ 3.18
COPS9-203ENST00000489698 GJD4Q96KN9 370 aaPredicted RBP34.89■■■■□ 3.18
COPS9-203ENST00000489698 ATP7BP35670 1465 aa34.89■■■■□ 3.18
COPS9-203ENST00000489698 ITSN1Q15811 1721 aa34.89■■■■□ 3.18
COPS9-203ENST00000489698 PAK3O75914 559 aaPredicted RBP34.88■■■■□ 3.17
COPS9-203ENST00000489698 TRIM26Q12899 539 aaPredicted RBP34.88■■■■□ 3.17
COPS9-203ENST00000489698 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.88■■■■□ 3.17
COPS9-203ENST00000489698 CENPJQ9HC77 1338 aaPredicted RBP34.87■■■■□ 3.17
COPS9-203ENST00000489698 TRPM3Q9HCF6 1732 aaPredicted RBP34.87■■■■□ 3.17
COPS9-203ENST00000489698 ZRANB1Q9UGI0 708 aa34.85■■■■□ 3.17
COPS9-203ENST00000489698 UNC5CLQ8IV45 518 aa34.83■■■■□ 3.17
COPS9-203ENST00000489698 ABCA3Q99758 1704 aa34.82■■■■□ 3.16
COPS9-203ENST00000489698 CCDC61Q9Y6R9 512 aa34.82■■■■□ 3.16
COPS9-203ENST00000489698 SRPK2P78362 688 aaKnown RBP34.81■■■■□ 3.16
COPS9-203ENST00000489698 CCDC125Q86Z20 511 aa34.81■■■■□ 3.16
COPS9-203ENST00000489698 TRPM1Q7Z4N2 1603 aa34.81■■■■□ 3.16
COPS9-203ENST00000489698 SLIT2O94813 1529 aa34.81■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms