RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 ADGRL3Q9HAR2 1447 aa11.31□□□□□ -0.6
SSR1-210ENST00000489567 TRAK1Q9UPV9 953 aa11.31□□□□□ -0.6
SSR1-210ENST00000489567 CLSPNQ9HAW4 1339 aa11.31□□□□□ -0.6
SSR1-210ENST00000489567 KIAA1210Q9ULL0 1709 aa11.3□□□□□ -0.6
SSR1-210ENST00000489567 FAM135BQ49AJ0 1406 aa11.29□□□□□ -0.6
SSR1-210ENST00000489567 SAFB2Q14151 953 aaKnown RBP eCLIP11.29□□□□□ -0.6
SSR1-210ENST00000489567 PRAM1Q96QH2 718 aa11.29□□□□□ -0.6
SSR1-210ENST00000489567 TRPM1Q7Z4N2 1603 aa11.28□□□□□ -0.6
SSR1-210ENST00000489567 KCNA4P22459 653 aa11.28□□□□□ -0.6
SSR1-210ENST00000489567 SIRT1Q96EB6 747 aa11.28□□□□□ -0.6
SSR1-210ENST00000489567 SLAIN2Q9P270 581 aa11.28□□□□□ -0.6
SSR1-210ENST00000489567 DLC1Q96QB1 1528 aa11.28□□□□□ -0.6
SSR1-210ENST00000489567 ATF3P18847 181 aa11.27□□□□□ -0.6
SSR1-210ENST00000489567 CADPS2Q86UW7 1296 aa11.27□□□□□ -0.6
SSR1-210ENST00000489567 DCCP43146 1447 aa11.27□□□□□ -0.6
SSR1-210ENST00000489567 MST1RQ04912 1400 aa11.26□□□□□ -0.61
SSR1-210ENST00000489567 PPP4R3CPQ6ZMV5 832 aa11.26□□□□□ -0.61
SSR1-210ENST00000489567 ARHGEF28Q8N1W1 1705 aaKnown RBP11.26□□□□□ -0.61
SSR1-210ENST00000489567 AMER1Q5JTC6 1135 aaPredicted RBP11.25□□□□□ -0.61
SSR1-210ENST00000489567 POGKQ9P215 609 aa11.25□□□□□ -0.61
SSR1-210ENST00000489567 ROCK2O75116 1388 aaKnown RBP11.25□□□□□ -0.61
SSR1-210ENST00000489567 ROBO1Q9Y6N7 1651 aa11.25□□□□□ -0.61
SSR1-210ENST00000489567 HSPA1LP34931 641 aa11.25□□□□□ -0.61
SSR1-210ENST00000489567 CDC42BPGQ6DT37 1551 aa11.24□□□□□ -0.61
SSR1-210ENST00000489567 HIRIP3Q9BW71 556 aaPredicted RBP11.24□□□□□ -0.61
SSR1-210ENST00000489567 NUTM2FA1L443 756 aa11.23□□□□□ -0.61
SSR1-210ENST00000489567 BRINP3Q76B58 766 aa11.23□□□□□ -0.61
SSR1-210ENST00000489567 RALGAPBQ86X10 1494 aa11.23□□□□□ -0.61
SSR1-210ENST00000489567 GPRASP1Q5JY77 1395 aa11.23□□□□□ -0.61
SSR1-210ENST00000489567 MINK1Q8N4C8 1332 aaPredicted RBP11.23□□□□□ -0.61
SSR1-210ENST00000489567 C1orf167Q5SNV9 1468 aa11.23□□□□□ -0.61
SSR1-210ENST00000489567 TIMELESSQ9UNS1 1208 aa11.22□□□□□ -0.61
SSR1-210ENST00000489567 ORAI2Q96SN7 254 aa11.21□□□□□ -0.61
SSR1-210ENST00000489567 ADGRB2O60241 1585 aa11.21□□□□□ -0.62
SSR1-210ENST00000489567 FMN2Q9NZ56 1722 aa11.2□□□□□ -0.62
SSR1-210ENST00000489567 DDX17Q92841 729 aaKnown RBP11.2□□□□□ -0.62
SSR1-210ENST00000489567 CARD11Q9BXL7 1154 aa11.2□□□□□ -0.62
SSR1-210ENST00000489567 CENPJQ9HC77 1338 aaPredicted RBP11.2□□□□□ -0.62
SSR1-210ENST00000489567 USP32Q8NFA0 1604 aa11.18□□□□□ -0.62
SSR1-210ENST00000489567 PRR36Q9H6K5 1346 aa11.18□□□□□ -0.62
SSR1-210ENST00000489567 WASLO00401 505 aaPredicted RBP11.18□□□□□ -0.62
SSR1-210ENST00000489567 ESCO1Q5FWF5 840 aa11.18□□□□□ -0.62
SSR1-210ENST00000489567 QRICH2Q9H0J4 1663 aa11.17□□□□□ -0.62
SSR1-210ENST00000489567 AHDC1Q5TGY3 1603 aaPredicted RBP11.17□□□□□ -0.62
SSR1-210ENST00000489567 RGPD8O14715 1765 aaPredicted RBP11.17□□□□□ -0.62
SSR1-210ENST00000489567 PHLPP1O60346 1717 aa11.16□□□□□ -0.62
SSR1-210ENST00000489567 COL16A1Q07092 1604 aaPredicted RBP11.16□□□□□ -0.62
SSR1-210ENST00000489567 CDK19Q9BWU1 502 aa11.16□□□□□ -0.62
SSR1-210ENST00000489567 NHSL1Q5SYE7 1610 aa11.16□□□□□ -0.62
SSR1-210ENST00000489567 TULP4Q9NRJ4 1543 aa11.15□□□□□ -0.62
SSR1-210ENST00000489567 EIF3AQ14152 1382 aaKnown RBP11.15□□□□□ -0.62
SSR1-210ENST00000489567 ANKARQ7Z5J8 1434 aa11.15□□□□□ -0.63
SSR1-210ENST00000489567 FOXO3O43524 673 aa11.15□□□□□ -0.63
SSR1-210ENST00000489567 ATP7BP35670 1465 aa11.14□□□□□ -0.63
SSR1-210ENST00000489567 XPCQ01831 940 aaPredicted RBP11.14□□□□□ -0.63
SSR1-210ENST00000489567 ST20-MTHFSA0A0A6YYL1 179 aa11.13□□□□□ -0.63
SSR1-210ENST00000489567 PMFBP1Q8TBY8 1022 aa11.13□□□□□ -0.63
SSR1-210ENST00000489567 NUDT16Q96DE0 195 aaKnown RBP11.13□□□□□ -0.63
SSR1-210ENST00000489567 CABP2Q9NPB3 220 aa11.13□□□□□ -0.63
SSR1-210ENST00000489567 PHF8Q9UPP1 1060 aa11.13□□□□□ -0.63
SSR1-210ENST00000489567 SOS2Q07890 1332 aaPredicted RBP11.12□□□□□ -0.63
SSR1-210ENST00000489567 USP47Q96K76 1375 aa11.12□□□□□ -0.63
SSR1-210ENST00000489567 SRPK2P78362 688 aaKnown RBP11.12□□□□□ -0.63
SSR1-210ENST00000489567 TESK2Q96S53 571 aa11.12□□□□□ -0.63
SSR1-210ENST00000489567 PXDNQ92626 1479 aa11.12□□□□□ -0.63
SSR1-210ENST00000489567 NPHP3Q7Z494 1330 aa11.11□□□□□ -0.63
SSR1-210ENST00000489567 SBNO2Q9Y2G9 1366 aa11.11□□□□□ -0.63
SSR1-210ENST00000489567 KIF1AQ12756 1690 aa11.11□□□□□ -0.63
SSR1-210ENST00000489567 EVC2Q86UK5 1308 aa11.1□□□□□ -0.63
SSR1-210ENST00000489567 TOPAZ1Q8N9V7 1692 aa11.1□□□□□ -0.63
SSR1-210ENST00000489567 JCADQ9P266 1359 aa11.1□□□□□ -0.63
SSR1-210ENST00000489567 CCDC61Q9Y6R9 512 aa11.1□□□□□ -0.63
SSR1-210ENST00000489567 NCBP3Q53F19 620 aaKnown RBP11.09□□□□□ -0.63
SSR1-210ENST00000489567 KRT28Q7Z3Y7 464 aa11.08□□□□□ -0.64
SSR1-210ENST00000489567 LRRC59Q96AG4 307 aaKnown RBP11.08□□□□□ -0.64
SSR1-210ENST00000489567 PPIP5K1Q6PFW1 1433 aa11.08□□□□□ -0.64
SSR1-210ENST00000489567 PNPLA6Q8IY17 1366 aa11.08□□□□□ -0.64
SSR1-210ENST00000489567 ITSN1Q15811 1721 aa11.08□□□□□ -0.64
SSR1-210ENST00000489567 PLEKHG3A1L390 1219 aa11.07□□□□□ -0.64
SSR1-210ENST00000489567 PSME1Q06323 249 aa11.07□□□□□ -0.64
SSR1-210ENST00000489567 NGDNQ8NEJ9 315 aaKnown RBP11.07□□□□□ -0.64
SSR1-210ENST00000489567 CABP1Q9NZU7 370 aa11.07□□□□□ -0.64
SSR1-210ENST00000489567 SHPRHQ149N8 1683 aa11.07□□□□□ -0.64
SSR1-210ENST00000489567 POLR3AO14802 1390 aaPredicted RBP11.07□□□□□ -0.64
SSR1-210ENST00000489567 DISP3Q9P2K9 1392 aa11.07□□□□□ -0.64
SSR1-210ENST00000489567 ACEP12821 1306 aa11.06□□□□□ -0.64
SSR1-210ENST00000489567 MED1Q15648 1581 aaPredicted RBP11.06□□□□□ -0.64
SSR1-210ENST00000489567 LRP6O75581 1613 aa11.06□□□□□ -0.64
SSR1-210ENST00000489567 SPATA31A3Q5VYP0 1347 aa11.06□□□□□ -0.64
SSR1-210ENST00000489567 TRPM3Q9HCF6 1732 aaPredicted RBP11.05□□□□□ -0.64
SSR1-210ENST00000489567 NUTM2BA6NNL0 878 aaPredicted RBP11.04□□□□□ -0.64
SSR1-210ENST00000489567 NUTM2EB1AL46 878 aaPredicted RBP11.04□□□□□ -0.64
SSR1-210ENST00000489567 HSPA5P11021 654 aaKnown RBP11.04□□□□□ -0.64
SSR1-210ENST00000489567 NUTM2AQ8IVF1 878 aaPredicted RBP11.04□□□□□ -0.64
SSR1-210ENST00000489567 SBNO1A3KN83 1393 aa11.04□□□□□ -0.64
SSR1-210ENST00000489567 ATAD2Q6PL18 1390 aa11.04□□□□□ -0.64
SSR1-210ENST00000489567 SPATA31A6Q5VVP1 1343 aa11.04□□□□□ -0.64
SSR1-210ENST00000489567 TNS3Q68CZ2 1445 aa11.04□□□□□ -0.64
SSR1-210ENST00000489567 EIF4G2P78344 907 aaKnown RBP eCLIP11.04□□□□□ -0.64
SSR1-210ENST00000489567 COL22A1Q8NFW1 1626 aaPredicted RBP11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms