RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 TOM1O60784 492 aa20.62■□□□□ 0.89
HLA-F-229ENST00000489502 PIP4K2BP78356 416 aa20.62■□□□□ 0.89
HLA-F-229ENST00000489502 C19orf44Q9H6X5 657 aa20.61■□□□□ 0.89
HLA-F-229ENST00000489502 GPRASP1Q5JY77 1395 aa20.59■□□□□ 0.89
HLA-F-229ENST00000489502 ROBO1Q9Y6N7 1651 aa20.59■□□□□ 0.89
HLA-F-229ENST00000489502 ATF3P18847 181 aa20.59■□□□□ 0.89
HLA-F-229ENST00000489502 ILDR1Q86SU0 546 aaPredicted RBP20.59■□□□□ 0.89
HLA-F-229ENST00000489502 POGKQ9P215 609 aa20.59■□□□□ 0.89
HLA-F-229ENST00000489502 ADGRB2O60241 1585 aa20.59■□□□□ 0.89
HLA-F-229ENST00000489502 QRICH2Q9H0J4 1663 aa20.58■□□□□ 0.89
HLA-F-229ENST00000489502 MST1RQ04912 1400 aa20.58■□□□□ 0.88
HLA-F-229ENST00000489502 FMN2Q9NZ56 1722 aa20.58■□□□□ 0.88
HLA-F-229ENST00000489502 CADPS2Q86UW7 1296 aa20.57■□□□□ 0.88
HLA-F-229ENST00000489502 SIRT1Q96EB6 747 aa20.57■□□□□ 0.88
HLA-F-229ENST00000489502 TIMELESSQ9UNS1 1208 aa20.56■□□□□ 0.88
HLA-F-229ENST00000489502 MINK1Q8N4C8 1332 aaPredicted RBP20.54■□□□□ 0.88
HLA-F-229ENST00000489502 HIRIP3Q9BW71 556 aaPredicted RBP20.53■□□□□ 0.88
HLA-F-229ENST00000489502 CARD11Q9BXL7 1154 aa20.53■□□□□ 0.88
HLA-F-229ENST00000489502 SLAIN2Q9P270 581 aa20.52■□□□□ 0.88
HLA-F-229ENST00000489502 C1orf167Q5SNV9 1468 aa20.51■□□□□ 0.87
HLA-F-229ENST00000489502 CENPJQ9HC77 1338 aaPredicted RBP20.51■□□□□ 0.87
HLA-F-229ENST00000489502 EIF3AQ14152 1382 aaKnown RBP20.5■□□□□ 0.87
HLA-F-229ENST00000489502 NUTM2FA1L443 756 aa20.5■□□□□ 0.87
HLA-F-229ENST00000489502 USP32Q8NFA0 1604 aa20.49■□□□□ 0.87
HLA-F-229ENST00000489502 RGPD8O14715 1765 aaPredicted RBP20.49■□□□□ 0.87
HLA-F-229ENST00000489502 TULP4Q9NRJ4 1543 aa20.47■□□□□ 0.87
HLA-F-229ENST00000489502 BRINP3Q76B58 766 aa20.46■□□□□ 0.87
HLA-F-229ENST00000489502 NHSL1Q5SYE7 1610 aa20.45■□□□□ 0.87
HLA-F-229ENST00000489502 PHLPP1O60346 1717 aa20.45■□□□□ 0.86
HLA-F-229ENST00000489502 HSPA1LP34931 641 aa20.45■□□□□ 0.86
HLA-F-229ENST00000489502 AHDC1Q5TGY3 1603 aaPredicted RBP20.45■□□□□ 0.86
HLA-F-229ENST00000489502 USP47Q96K76 1375 aa20.44■□□□□ 0.86
HLA-F-229ENST00000489502 ORAI2Q96SN7 254 aa20.43■□□□□ 0.86
HLA-F-229ENST00000489502 ANKARQ7Z5J8 1434 aa20.43■□□□□ 0.86
HLA-F-229ENST00000489502 ATP7BP35670 1465 aa20.43■□□□□ 0.86
HLA-F-229ENST00000489502 COL16A1Q07092 1604 aaPredicted RBP20.42■□□□□ 0.86
HLA-F-229ENST00000489502 KIF1AQ12756 1690 aa20.42■□□□□ 0.86
HLA-F-229ENST00000489502 WASLO00401 505 aaPredicted RBP20.42■□□□□ 0.86
HLA-F-229ENST00000489502 TOPAZ1Q8N9V7 1692 aa20.42■□□□□ 0.86
HLA-F-229ENST00000489502 PRR36Q9H6K5 1346 aa20.41■□□□□ 0.86
HLA-F-229ENST00000489502 ITSN1Q15811 1721 aa20.41■□□□□ 0.86
HLA-F-229ENST00000489502 ESCO1Q5FWF5 840 aa20.4■□□□□ 0.86
HLA-F-229ENST00000489502 DDX17Q92841 729 aaKnown RBP20.39■□□□□ 0.85
HLA-F-229ENST00000489502 SBNO2Q9Y2G9 1366 aa20.38■□□□□ 0.85
HLA-F-229ENST00000489502 CDK19Q9BWU1 502 aa20.38■□□□□ 0.85
HLA-F-229ENST00000489502 ST20-MTHFSA0A0A6YYL1 179 aa20.35■□□□□ 0.85
HLA-F-229ENST00000489502 SRPK2P78362 688 aaKnown RBP20.35■□□□□ 0.85
HLA-F-229ENST00000489502 CABP2Q9NPB3 220 aa20.35■□□□□ 0.85
HLA-F-229ENST00000489502 EVC2Q86UK5 1308 aa20.33■□□□□ 0.85
HLA-F-229ENST00000489502 PXDNQ92626 1479 aa20.33■□□□□ 0.85
HLA-F-229ENST00000489502 NUDT16Q96DE0 195 aaKnown RBP20.33■□□□□ 0.85
HLA-F-229ENST00000489502 PHF8Q9UPP1 1060 aa20.33■□□□□ 0.85
HLA-F-229ENST00000489502 XPCQ01831 940 aaPredicted RBP20.32■□□□□ 0.84
HLA-F-229ENST00000489502 PMFBP1Q8TBY8 1022 aa20.32■□□□□ 0.84
HLA-F-229ENST00000489502 TESK2Q96S53 571 aa20.32■□□□□ 0.84
HLA-F-229ENST00000489502 FOXO3O43524 673 aa20.31■□□□□ 0.84
HLA-F-229ENST00000489502 NPHP3Q7Z494 1330 aa20.3■□□□□ 0.84
HLA-F-229ENST00000489502 PPIP5K1Q6PFW1 1433 aa20.29■□□□□ 0.84
HLA-F-229ENST00000489502 DISP3Q9P2K9 1392 aa20.29■□□□□ 0.84
HLA-F-229ENST00000489502 SHPRHQ149N8 1683 aa20.29■□□□□ 0.84
HLA-F-229ENST00000489502 SOS2Q07890 1332 aaPredicted RBP20.27■□□□□ 0.84
HLA-F-229ENST00000489502 TRPM3Q9HCF6 1732 aaPredicted RBP20.27■□□□□ 0.83
HLA-F-229ENST00000489502 HSPA5P11021 654 aaKnown RBP20.26■□□□□ 0.83
HLA-F-229ENST00000489502 ATAD2Q6PL18 1390 aa20.25■□□□□ 0.83
HLA-F-229ENST00000489502 JCADQ9P266 1359 aa20.25■□□□□ 0.83
HLA-F-229ENST00000489502 EIF4G2P78344 907 aaKnown RBP eCLIP20.25■□□□□ 0.83
HLA-F-229ENST00000489502 CCDC61Q9Y6R9 512 aa20.25■□□□□ 0.83
HLA-F-229ENST00000489502 NGDNQ8NEJ9 315 aaKnown RBP20.23■□□□□ 0.83
HLA-F-229ENST00000489502 POLR3AO14802 1390 aaPredicted RBP20.22■□□□□ 0.83
HLA-F-229ENST00000489502 PNPLA6Q8IY17 1366 aa20.22■□□□□ 0.83
HLA-F-229ENST00000489502 TNS3Q68CZ2 1445 aa20.22■□□□□ 0.83
HLA-F-229ENST00000489502 AKAP12Q02952 1782 aa20.22■□□□□ 0.83
HLA-F-229ENST00000489502 KRT28Q7Z3Y7 464 aa20.22■□□□□ 0.83
HLA-F-229ENST00000489502 ACEP12821 1306 aa20.22■□□□□ 0.83
HLA-F-229ENST00000489502 MED1Q15648 1581 aaPredicted RBP20.21■□□□□ 0.83
HLA-F-229ENST00000489502 CABP1Q9NZU7 370 aa20.21■□□□□ 0.83
HLA-F-229ENST00000489502 ALS2Q96Q42 1657 aa20.2■□□□□ 0.82
HLA-F-229ENST00000489502 PLEKHG3A1L390 1219 aa20.2■□□□□ 0.82
HLA-F-229ENST00000489502 TMF1P82094 1093 aa20.2■□□□□ 0.82
HLA-F-229ENST00000489502 LRRC59Q96AG4 307 aaKnown RBP20.2■□□□□ 0.82
HLA-F-229ENST00000489502 COL22A1Q8NFW1 1626 aaPredicted RBP20.2■□□□□ 0.82
HLA-F-229ENST00000489502 MYOM1P52179 1685 aa20.19■□□□□ 0.82
HLA-F-229ENST00000489502 PSME1Q06323 249 aa20.19■□□□□ 0.82
HLA-F-229ENST00000489502 LRP6O75581 1613 aa20.19■□□□□ 0.82
HLA-F-229ENST00000489502 NRKQ7Z2Y5 1582 aa20.18■□□□□ 0.82
HLA-F-229ENST00000489502 MON2Q7Z3U7 1717 aa20.18■□□□□ 0.82
HLA-F-229ENST00000489502 ABCA3Q99758 1704 aa20.17■□□□□ 0.82
HLA-F-229ENST00000489502 SPATA31A3Q5VYP0 1347 aa20.17■□□□□ 0.82
HLA-F-229ENST00000489502 SBNO1A3KN83 1393 aa20.17■□□□□ 0.82
HLA-F-229ENST00000489502 CD163L1Q9NR16 1453 aa20.17■□□□□ 0.82
HLA-F-229ENST00000489502 TMC1Q8TDI8 760 aa20.16■□□□□ 0.82
HLA-F-229ENST00000489502 USP6P35125 1406 aa20.16■□□□□ 0.82
HLA-F-229ENST00000489502 SLC24A1O60721 1099 aa20.14■□□□□ 0.81
HLA-F-229ENST00000489502 LMOD2Q6P5Q4 547 aa20.14■□□□□ 0.81
HLA-F-229ENST00000489502 CPSF1Q10570 1443 aaKnown RBP20.13■□□□□ 0.81
HLA-F-229ENST00000489502 NUTM2BA6NNL0 878 aaPredicted RBP20.13■□□□□ 0.81
HLA-F-229ENST00000489502 NUTM2EB1AL46 878 aaPredicted RBP20.13■□□□□ 0.81
HLA-F-229ENST00000489502 PAK3O75914 559 aaPredicted RBP20.13■□□□□ 0.81
HLA-F-229ENST00000489502 PLEKHG5O94827 1062 aa20.13■□□□□ 0.81
HLA-F-229ENST00000489502 NUTM2AQ8IVF1 878 aaPredicted RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms