RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 LRRC7Q96NW7 1537 aa20.01■□□□□ 0.79
CLDN11-209ENST00000489485 MINK1Q8N4C8 1332 aaPredicted RBP20■□□□□ 0.79
CLDN11-209ENST00000489485 XIRP1Q702N8 1843 aaKnown RBP19.99■□□□□ 0.79
CLDN11-209ENST00000489485 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.98■□□□□ 0.79
CLDN11-209ENST00000489485 NALCNQ8IZF0 1738 aa19.97■□□□□ 0.79
CLDN11-209ENST00000489485 ADGRL3Q9HAR2 1447 aa19.95■□□□□ 0.78
CLDN11-209ENST00000489485 TESK2Q96S53 571 aa19.94■□□□□ 0.78
CLDN11-209ENST00000489485 NCOA3Q9Y6Q9 1424 aa19.94■□□□□ 0.78
CLDN11-209ENST00000489485 C19orf44Q9H6X5 657 aa19.94■□□□□ 0.78
CLDN11-209ENST00000489485 MSH6P52701 1360 aa19.93■□□□□ 0.78
CLDN11-209ENST00000489485 SBNO2Q9Y2G9 1366 aa19.93■□□□□ 0.78
CLDN11-209ENST00000489485 ZNF316A6NFI3 1004 aaPredicted RBP19.92■□□□□ 0.78
CLDN11-209ENST00000489485 SLC24A1O60721 1099 aa19.91■□□□□ 0.78
CLDN11-209ENST00000489485 EVC2Q86UK5 1308 aa19.91■□□□□ 0.78
CLDN11-209ENST00000489485 TMF1P82094 1093 aa19.9■□□□□ 0.78
CLDN11-209ENST00000489485 ADGRB2O60241 1585 aa19.9■□□□□ 0.78
CLDN11-209ENST00000489485 WASLO00401 505 aaPredicted RBP19.9■□□□□ 0.78
CLDN11-209ENST00000489485 ATF3P18847 181 aa19.9■□□□□ 0.78
CLDN11-209ENST00000489485 NUTM2FA1L443 756 aa19.89■□□□□ 0.77
CLDN11-209ENST00000489485 SRPK2P78362 688 aaKnown RBP19.89■□□□□ 0.77
CLDN11-209ENST00000489485 CDK19Q9BWU1 502 aa19.89■□□□□ 0.77
CLDN11-209ENST00000489485 TULP4Q9NRJ4 1543 aa19.88■□□□□ 0.77
CLDN11-209ENST00000489485 CDC42BPGQ6DT37 1551 aa19.88■□□□□ 0.77
CLDN11-209ENST00000489485 CADPS2Q86UW7 1296 aa19.87■□□□□ 0.77
CLDN11-209ENST00000489485 CERKQ8TCT0 537 aa19.87■□□□□ 0.77
CLDN11-209ENST00000489485 CABP2Q9NPB3 220 aa19.87■□□□□ 0.77
CLDN11-209ENST00000489485 DISP3Q9P2K9 1392 aa19.87■□□□□ 0.77
CLDN11-209ENST00000489485 DCCP43146 1447 aa19.86■□□□□ 0.77
CLDN11-209ENST00000489485 POLR3GLQ9BT43 218 aa19.85■□□□□ 0.77
CLDN11-209ENST00000489485 FMN2Q9NZ56 1722 aa19.84■□□□□ 0.77
CLDN11-209ENST00000489485 C11orf95C9JLR9 678 aaPredicted RBP19.83■□□□□ 0.76
CLDN11-209ENST00000489485 CDCA8Q53HL2 280 aa19.83■□□□□ 0.76
CLDN11-209ENST00000489485 RGPD8O14715 1765 aaPredicted RBP19.82■□□□□ 0.76
CLDN11-209ENST00000489485 IQSEC2Q5JU85 1478 aa19.81■□□□□ 0.76
CLDN11-209ENST00000489485 NUDT16Q96DE0 195 aaKnown RBP19.81■□□□□ 0.76
CLDN11-209ENST00000489485 SLAIN2Q9P270 581 aa19.79■□□□□ 0.76
CLDN11-209ENST00000489485 PRR36Q9H6K5 1346 aa19.79■□□□□ 0.76
CLDN11-209ENST00000489485 MST1RQ04912 1400 aa19.79■□□□□ 0.76
CLDN11-209ENST00000489485 USP32Q8NFA0 1604 aa19.79■□□□□ 0.76
CLDN11-209ENST00000489485 ATP7BP35670 1465 aa19.79■□□□□ 0.76
CLDN11-209ENST00000489485 TOM1O60784 492 aa19.78■□□□□ 0.76
CLDN11-209ENST00000489485 ESCO1Q5FWF5 840 aa19.78■□□□□ 0.76
CLDN11-209ENST00000489485 UBAP1LF5GYI3 381 aa19.77■□□□□ 0.76
CLDN11-209ENST00000489485 TMC1Q8TDI8 760 aa19.77■□□□□ 0.76
CLDN11-209ENST00000489485 CCDC61Q9Y6R9 512 aa19.77■□□□□ 0.76
CLDN11-209ENST00000489485 KIF7Q2M1P5 1343 aa19.77■□□□□ 0.76
CLDN11-209ENST00000489485 ATAD2Q6PL18 1390 aa19.77■□□□□ 0.76
CLDN11-209ENST00000489485 ANKARQ7Z5J8 1434 aa19.77■□□□□ 0.76
CLDN11-209ENST00000489485 C1orf167Q5SNV9 1468 aa19.77■□□□□ 0.76
CLDN11-209ENST00000489485 WASHC2AQ641Q2 1341 aa19.77■□□□□ 0.76
CLDN11-209ENST00000489485 PUS7Q96PZ0 661 aaKnown RBP19.77■□□□□ 0.76
CLDN11-209ENST00000489485 ITSN1Q15811 1721 aa19.76■□□□□ 0.75
CLDN11-209ENST00000489485 ORAI2Q96SN7 254 aa19.75■□□□□ 0.75
CLDN11-209ENST00000489485 PPIP5K1Q6PFW1 1433 aa19.75■□□□□ 0.75
CLDN11-209ENST00000489485 CABP1Q9NZU7 370 aa19.75■□□□□ 0.75
CLDN11-209ENST00000489485 CCDC7Q96M83 1385 aa19.74■□□□□ 0.75
CLDN11-209ENST00000489485 PMFBP1Q8TBY8 1022 aa19.74■□□□□ 0.75
CLDN11-209ENST00000489485 SCAF1Q9H7N4 1312 aaKnown RBP19.73■□□□□ 0.75
CLDN11-209ENST00000489485 PIP4K2BP78356 416 aa19.73■□□□□ 0.75
CLDN11-209ENST00000489485 SLC12A5Q9H2X9 1139 aa19.73■□□□□ 0.75
CLDN11-209ENST00000489485 TOPAZ1Q8N9V7 1692 aa19.73■□□□□ 0.75
CLDN11-209ENST00000489485 PHF8Q9UPP1 1060 aa19.72■□□□□ 0.75
CLDN11-209ENST00000489485 BRINP3Q76B58 766 aa19.71■□□□□ 0.75
CLDN11-209ENST00000489485 MYOM1P52179 1685 aa19.7■□□□□ 0.74
CLDN11-209ENST00000489485 NGDNQ8NEJ9 315 aaKnown RBP19.7■□□□□ 0.74
CLDN11-209ENST00000489485 ROBO1Q9Y6N7 1651 aa19.69■□□□□ 0.74
CLDN11-209ENST00000489485 DDX10Q13206 875 aaKnown RBP19.69■□□□□ 0.74
CLDN11-209ENST00000489485 NINLQ9Y2I6 1382 aa19.68■□□□□ 0.74
CLDN11-209ENST00000489485 PLEKHG3A1L390 1219 aa19.68■□□□□ 0.74
CLDN11-209ENST00000489485 FOXO3O43524 673 aa19.68■□□□□ 0.74
CLDN11-209ENST00000489485 ACEP12821 1306 aa19.68■□□□□ 0.74
CLDN11-209ENST00000489485 KIF1AQ12756 1690 aa19.67■□□□□ 0.74
CLDN11-209ENST00000489485 TERF2IPQ9NYB0 399 aa19.66■□□□□ 0.74
CLDN11-209ENST00000489485 HDGFL2Q7Z4V5 671 aaPredicted RBP19.65■□□□□ 0.74
CLDN11-209ENST00000489485 DDX17Q92841 729 aaKnown RBP19.65■□□□□ 0.74
CLDN11-209ENST00000489485 PSME1Q06323 249 aa19.65■□□□□ 0.74
CLDN11-209ENST00000489485 POLR3AO14802 1390 aaPredicted RBP19.64■□□□□ 0.73
CLDN11-209ENST00000489485 XPCQ01831 940 aaPredicted RBP19.63■□□□□ 0.73
CLDN11-209ENST00000489485 A0A1W2PP64 1363 aa19.63■□□□□ 0.73
CLDN11-209ENST00000489485 CD163L1Q9NR16 1453 aa19.63■□□□□ 0.73
CLDN11-209ENST00000489485 ZNF692Q9BU19 519 aaPredicted RBP19.62■□□□□ 0.73
CLDN11-209ENST00000489485 PANK3Q9H999 370 aa19.62■□□□□ 0.73
CLDN11-209ENST00000489485 NPHP3Q7Z494 1330 aa19.62■□□□□ 0.73
CLDN11-209ENST00000489485 KTN1Q86UP2 1357 aaKnown RBP19.62■□□□□ 0.73
CLDN11-209ENST00000489485 ANKRD36BQ8N2N9 1353 aa19.62■□□□□ 0.73
CLDN11-209ENST00000489485 AKAP12Q02952 1782 aa19.62■□□□□ 0.73
CLDN11-209ENST00000489485 CPSF1Q10570 1443 aaKnown RBP19.61■□□□□ 0.73
CLDN11-209ENST00000489485 KRT28Q7Z3Y7 464 aa19.6■□□□□ 0.73
CLDN11-209ENST00000489485 NHSL1Q5SYE7 1610 aa19.59■□□□□ 0.73
CLDN11-209ENST00000489485 MON2Q7Z3U7 1717 aa19.59■□□□□ 0.73
CLDN11-209ENST00000489485 USP6P35125 1406 aa19.59■□□□□ 0.73
CLDN11-209ENST00000489485 PAK3O75914 559 aaPredicted RBP19.58■□□□□ 0.73
CLDN11-209ENST00000489485 DIEXFQ68CQ4 756 aaKnown RBP19.58■□□□□ 0.72
CLDN11-209ENST00000489485 CARD14Q9BXL6 1004 aa19.57■□□□□ 0.72
CLDN11-209ENST00000489485 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.56■□□□□ 0.72
CLDN11-209ENST00000489485 PHLPP1O60346 1717 aa19.56■□□□□ 0.72
CLDN11-209ENST00000489485 PXDNQ92626 1479 aa19.56■□□□□ 0.72
CLDN11-209ENST00000489485 AHDC1Q5TGY3 1603 aaPredicted RBP19.55■□□□□ 0.72
CLDN11-209ENST00000489485 NSD3Q9BZ95 1437 aa19.55■□□□□ 0.72
CLDN11-209ENST00000489485 SOS2Q07890 1332 aaPredicted RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms