RNA–Protein interactions for RNA: ENST00000489452.1

LINC00173-204, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 543 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-204ENST00000489452 PPLO60437 1756 aa19.88■□□□□ 0.77
LINC00173-204ENST00000489452 SOS2Q07890 1332 aaPredicted RBP19.88■□□□□ 0.77
LINC00173-204ENST00000489452 XPCQ01831 940 aaPredicted RBP19.87■□□□□ 0.77
LINC00173-204ENST00000489452 FOXO3O43524 673 aa19.86■□□□□ 0.77
LINC00173-204ENST00000489452 SPATA31E1Q6ZUB1 1445 aa19.85■□□□□ 0.77
LINC00173-204ENST00000489452 ANKRD30BQ9BXX2 1392 aa19.85■□□□□ 0.77
LINC00173-204ENST00000489452 RBM6P78332 1123 aaKnown RBP19.85■□□□□ 0.77
LINC00173-204ENST00000489452 LRPPRCP42704 1394 aaKnown RBP19.83■□□□□ 0.76
LINC00173-204ENST00000489452 USP21Q9UK80 565 aa19.82■□□□□ 0.76
LINC00173-204ENST00000489452 PRAG1Q86YV5 1406 aa19.82■□□□□ 0.76
LINC00173-204ENST00000489452 PLEKHH1Q9ULM0 1364 aa19.82■□□□□ 0.76
LINC00173-204ENST00000489452 NPHP3Q7Z494 1330 aa19.81■□□□□ 0.76
LINC00173-204ENST00000489452 ABCC11Q96J66 1382 aa19.81■□□□□ 0.76
LINC00173-204ENST00000489452 CFAP70Q5T0N1 1121 aa19.79■□□□□ 0.76
LINC00173-204ENST00000489452 SAFB2Q14151 953 aaKnown RBP eCLIP19.78■□□□□ 0.76
LINC00173-204ENST00000489452 C14orf93Q9H972 538 aaKnown RBP19.78■□□□□ 0.76
LINC00173-204ENST00000489452 CDK12Q9NYV4 1490 aaPredicted RBP19.77■□□□□ 0.76
LINC00173-204ENST00000489452 YTHDC2Q9H6S0 1430 aaKnown RBP19.76■□□□□ 0.75
LINC00173-204ENST00000489452 PLEKHG5O94827 1062 aa19.76■□□□□ 0.75
LINC00173-204ENST00000489452 FNBP4Q8N3X1 1017 aaPredicted RBP19.76■□□□□ 0.75
LINC00173-204ENST00000489452 TRPC5Q9UL62 973 aaPredicted RBP19.76■□□□□ 0.75
LINC00173-204ENST00000489452 TECPR2O15040 1411 aa19.76■□□□□ 0.75
LINC00173-204ENST00000489452 PIK3C2GO75747 1445 aa19.76■□□□□ 0.75
LINC00173-204ENST00000489452 LAMC1P11047 1609 aa19.75■□□□□ 0.75
LINC00173-204ENST00000489452 RGS12O14924 1447 aa19.75■□□□□ 0.75
LINC00173-204ENST00000489452 ACIN1Q9UKV3 1341 aaKnown RBP19.75■□□□□ 0.75
LINC00173-204ENST00000489452 KRT28Q7Z3Y7 464 aa19.74■□□□□ 0.75
LINC00173-204ENST00000489452 CDC42BPGQ6DT37 1551 aa19.74■□□□□ 0.75
LINC00173-204ENST00000489452 DHX57Q6P158 1386 aaKnown RBP19.73■□□□□ 0.75
LINC00173-204ENST00000489452 RAB3GAP2Q9H2M9 1393 aa19.73■□□□□ 0.75
LINC00173-204ENST00000489452 SIRT1Q96EB6 747 aa19.72■□□□□ 0.75
LINC00173-204ENST00000489452 PRAM1Q96QH2 718 aa19.72■□□□□ 0.75
LINC00173-204ENST00000489452 KDM2AQ9Y2K7 1162 aa19.72■□□□□ 0.75
LINC00173-204ENST00000489452 PXDNQ92626 1479 aa19.72■□□□□ 0.75
LINC00173-204ENST00000489452 IFT172Q9UG01 1749 aa19.71■□□□□ 0.75
LINC00173-204ENST00000489452 POGKQ9P215 609 aa19.71■□□□□ 0.75
LINC00173-204ENST00000489452 PHF8Q9UPP1 1060 aa19.7■□□□□ 0.74
LINC00173-204ENST00000489452 LMOD2Q6P5Q4 547 aa19.69■□□□□ 0.74
LINC00173-204ENST00000489452 SPATA31A3Q5VYP0 1347 aa19.69■□□□□ 0.74
LINC00173-204ENST00000489452 MYOM2P54296 1465 aa19.68■□□□□ 0.74
LINC00173-204ENST00000489452 HAP1P54257 671 aaPredicted RBP19.67■□□□□ 0.74
LINC00173-204ENST00000489452 CABLES1Q8TDN4 633 aa19.67■□□□□ 0.74
LINC00173-204ENST00000489452 TRAK1Q9UPV9 953 aa19.67■□□□□ 0.74
LINC00173-204ENST00000489452 PSME1Q06323 249 aa19.66■□□□□ 0.74
LINC00173-204ENST00000489452 PMFBP1Q8TBY8 1022 aa19.66■□□□□ 0.74
LINC00173-204ENST00000489452 DCAF11Q8TEB1 546 aa19.66■□□□□ 0.74
LINC00173-204ENST00000489452 HIRIP3Q9BW71 556 aaPredicted RBP19.66■□□□□ 0.74
LINC00173-204ENST00000489452 ATRNO75882 1429 aa19.66■□□□□ 0.74
LINC00173-204ENST00000489452 COL22A1Q8NFW1 1626 aaPredicted RBP19.65■□□□□ 0.74
LINC00173-204ENST00000489452 BCL9LQ86UU0 1499 aa19.65■□□□□ 0.74
LINC00173-204ENST00000489452 GJD4Q96KN9 370 aaPredicted RBP19.64■□□□□ 0.73
LINC00173-204ENST00000489452 KNDC1Q76NI1 1749 aa19.64■□□□□ 0.73
LINC00173-204ENST00000489452 FMN2Q9NZ56 1722 aa19.63■□□□□ 0.73
LINC00173-204ENST00000489452 NRXN1Q9ULB1 1477 aa19.63■□□□□ 0.73
LINC00173-204ENST00000489452 ATAD2Q6PL18 1390 aa19.63■□□□□ 0.73
LINC00173-204ENST00000489452 MINK1Q8N4C8 1332 aaPredicted RBP19.62■□□□□ 0.73
LINC00173-204ENST00000489452 UNC5CLQ8IV45 518 aa19.62■□□□□ 0.73
LINC00173-204ENST00000489452 SRCAPQ6ZRS2 3230 aa19.62■□□□□ 0.73
LINC00173-204ENST00000489452 EP400Q96L91 3159 aa19.6■□□□□ 0.73
LINC00173-204ENST00000489452 RGPD8O14715 1765 aaPredicted RBP19.6■□□□□ 0.73
LINC00173-204ENST00000489452 CCDC9Q9Y3X0 531 aaKnown RBP19.58■□□□□ 0.72
LINC00173-204ENST00000489452 TNS3Q68CZ2 1445 aa19.57■□□□□ 0.72
LINC00173-204ENST00000489452 KIF1AQ12756 1690 aa19.56■□□□□ 0.72
LINC00173-204ENST00000489452 SBNO1A3KN83 1393 aa19.55■□□□□ 0.72
LINC00173-204ENST00000489452 MARF1Q9Y4F3 1742 aaKnown RBP19.54■□□□□ 0.72
LINC00173-204ENST00000489452 FAM83GA6ND36 823 aa19.54■□□□□ 0.72
LINC00173-204ENST00000489452 WASLO00401 505 aaPredicted RBP19.54■□□□□ 0.72
LINC00173-204ENST00000489452 PRR36Q9H6K5 1346 aa19.53■□□□□ 0.72
LINC00173-204ENST00000489452 SLIT2O94813 1529 aa19.53■□□□□ 0.72
LINC00173-204ENST00000489452 HRCP23327 699 aa19.53■□□□□ 0.72
LINC00173-204ENST00000489452 NGDNQ8NEJ9 315 aaKnown RBP19.53■□□□□ 0.72
LINC00173-204ENST00000489452 RALGAPBQ86X10 1494 aa19.53■□□□□ 0.72
LINC00173-204ENST00000489452 DLC1Q96QB1 1528 aa19.52■□□□□ 0.72
LINC00173-204ENST00000489452 PAK3O75914 559 aaPredicted RBP19.52■□□□□ 0.72
LINC00173-204ENST00000489452 SEPT12Q8IYM1 358 aa19.52■□□□□ 0.72
LINC00173-204ENST00000489452 ARHGEF10O15013 1369 aa19.52■□□□□ 0.72
LINC00173-204ENST00000489452 ADGRB1O14514 1584 aa19.52■□□□□ 0.71
LINC00173-204ENST00000489452 VPS72Q15906 364 aa19.51■□□□□ 0.71
LINC00173-204ENST00000489452 STAC3Q96MF2 364 aa19.51■□□□□ 0.71
LINC00173-204ENST00000489452 GPRASP1Q5JY77 1395 aa19.51■□□□□ 0.71
LINC00173-204ENST00000489452 ANKARQ7Z5J8 1434 aa19.51■□□□□ 0.71
LINC00173-204ENST00000489452 CCDC125Q86Z20 511 aa19.5■□□□□ 0.71
LINC00173-204ENST00000489452 ZRANB1Q9UGI0 708 aa19.49■□□□□ 0.71
LINC00173-204ENST00000489452 USP32Q8NFA0 1604 aa19.48■□□□□ 0.71
LINC00173-204ENST00000489452 A0A0G2JS52 829 aa19.48■□□□□ 0.71
LINC00173-204ENST00000489452 MYT1Q01538 1121 aa19.48■□□□□ 0.71
LINC00173-204ENST00000489452 BTG4Q9NY30 223 aa19.48■□□□□ 0.71
LINC00173-204ENST00000489452 NUDT16Q96DE0 195 aaKnown RBP19.47■□□□□ 0.71
LINC00173-204ENST00000489452 GLI3P10071 1580 aa19.47■□□□□ 0.71
LINC00173-204ENST00000489452 EIF3AQ14152 1382 aaKnown RBP19.45■□□□□ 0.7
LINC00173-204ENST00000489452 CDK19Q9BWU1 502 aa19.45■□□□□ 0.7
LINC00173-204ENST00000489452 FAM98CQ17RN3 349 aaKnown RBP19.44■□□□□ 0.7
LINC00173-204ENST00000489452 KRT27Q7Z3Y8 459 aa19.44■□□□□ 0.7
LINC00173-204ENST00000489452 DEFB132Q7Z7B7 95 aa19.44■□□□□ 0.7
LINC00173-204ENST00000489452 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.43■□□□□ 0.7
LINC00173-204ENST00000489452 ONECUT3O60422 494 aaPredicted RBP19.43■□□□□ 0.7
LINC00173-204ENST00000489452 SF3B2Q13435 895 aaKnown RBP19.43■□□□□ 0.7
LINC00173-204ENST00000489452 NUTM2GQ5VZR2 741 aa19.43■□□□□ 0.7
LINC00173-204ENST00000489452 ADGRB2O60241 1585 aa19.43■□□□□ 0.7
LINC00173-204ENST00000489452 TULP4Q9NRJ4 1543 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms