RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 IFT172Q9UG01 1749 aa13.98□□□□□ -0.17
SNX17-207ENST00000489402 RGL3Q3MIN7 710 aa13.98□□□□□ -0.17
SNX17-207ENST00000489402 RGS12O14924 1447 aa13.98□□□□□ -0.17
SNX17-207ENST00000489402 COL22A1Q8NFW1 1626 aaPredicted RBP13.97□□□□□ -0.17
SNX17-207ENST00000489402 ANKRD30BQ9BXX2 1392 aa13.97□□□□□ -0.17
SNX17-207ENST00000489402 NPHP3Q7Z494 1330 aa13.97□□□□□ -0.17
SNX17-207ENST00000489402 ESCO1Q5FWF5 840 aa13.97□□□□□ -0.17
SNX17-207ENST00000489402 TMEM132EQ6IEE7 984 aa13.97□□□□□ -0.17
SNX17-207ENST00000489402 WAPLQ7Z5K2 1190 aa13.97□□□□□ -0.17
SNX17-207ENST00000489402 PLEKHH1Q9ULM0 1364 aa13.96□□□□□ -0.17
SNX17-207ENST00000489402 KNDC1Q76NI1 1749 aa13.96□□□□□ -0.17
SNX17-207ENST00000489402 STK26Q9P289 416 aa13.96□□□□□ -0.17
SNX17-207ENST00000489402 SPATA31E1Q6ZUB1 1445 aa13.96□□□□□ -0.18
SNX17-207ENST00000489402 NUTM2FA1L443 756 aa13.95□□□□□ -0.18
SNX17-207ENST00000489402 XPCQ01831 940 aaPredicted RBP13.95□□□□□ -0.18
SNX17-207ENST00000489402 MPHOSPH9Q99550 1183 aa13.95□□□□□ -0.18
SNX17-207ENST00000489402 USP21Q9UK80 565 aa13.95□□□□□ -0.18
SNX17-207ENST00000489402 TECPR2O15040 1411 aa13.95□□□□□ -0.18
SNX17-207ENST00000489402 LRPPRCP42704 1394 aaKnown RBP13.95□□□□□ -0.18
SNX17-207ENST00000489402 ADRA2BP18089 450 aa13.94□□□□□ -0.18
SNX17-207ENST00000489402 ACIN1Q9UKV3 1341 aaKnown RBP13.93□□□□□ -0.18
SNX17-207ENST00000489402 PIK3C2GO75747 1445 aa13.93□□□□□ -0.18
SNX17-207ENST00000489402 TRPC5Q9UL62 973 aaPredicted RBP13.93□□□□□ -0.18
SNX17-207ENST00000489402 MYOM2P54296 1465 aa13.93□□□□□ -0.18
SNX17-207ENST00000489402 PXDNQ92626 1479 aa13.93□□□□□ -0.18
SNX17-207ENST00000489402 MARF1Q9Y4F3 1742 aaKnown RBP13.93□□□□□ -0.18
SNX17-207ENST00000489402 SRCAPQ6ZRS2 3230 aa13.92□□□□□ -0.18
SNX17-207ENST00000489402 FOXO3O43524 673 aa13.92□□□□□ -0.18
SNX17-207ENST00000489402 ABCC11Q96J66 1382 aa13.92□□□□□ -0.18
SNX17-207ENST00000489402 FMN2Q9NZ56 1722 aa13.92□□□□□ -0.18
SNX17-207ENST00000489402 KIF1AQ12756 1690 aa13.91□□□□□ -0.18
SNX17-207ENST00000489402 EP400Q96L91 3159 aa13.91□□□□□ -0.18
SNX17-207ENST00000489402 FNBP4Q8N3X1 1017 aaPredicted RBP13.91□□□□□ -0.18
SNX17-207ENST00000489402 ATAD2Q6PL18 1390 aa13.91□□□□□ -0.18
SNX17-207ENST00000489402 YTHDC2Q9H6S0 1430 aaKnown RBP13.9□□□□□ -0.18
SNX17-207ENST00000489402 ATRNO75882 1429 aa13.9□□□□□ -0.19
SNX17-207ENST00000489402 RGPD8O14715 1765 aaPredicted RBP13.88□□□□□ -0.19
SNX17-207ENST00000489402 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.87□□□□□ -0.19
SNX17-207ENST00000489402 DHX57Q6P158 1386 aaKnown RBP13.86□□□□□ -0.19
SNX17-207ENST00000489402 CFAP70Q5T0N1 1121 aa13.86□□□□□ -0.19
SNX17-207ENST00000489402 SIRT1Q96EB6 747 aa13.86□□□□□ -0.19
SNX17-207ENST00000489402 C14orf93Q9H972 538 aaKnown RBP13.85□□□□□ -0.19
SNX17-207ENST00000489402 BCL9LQ86UU0 1499 aa13.85□□□□□ -0.19
SNX17-207ENST00000489402 NRXN1Q9ULB1 1477 aa13.85□□□□□ -0.19
SNX17-207ENST00000489402 SPATA31A3Q5VYP0 1347 aa13.85□□□□□ -0.19
SNX17-207ENST00000489402 HAP1P54257 671 aaPredicted RBP13.84□□□□□ -0.19
SNX17-207ENST00000489402 USP32Q8NFA0 1604 aa13.83□□□□□ -0.2
SNX17-207ENST00000489402 PLEKHG5O94827 1062 aa13.83□□□□□ -0.2
SNX17-207ENST00000489402 PSME1Q06323 249 aa13.83□□□□□ -0.2
SNX17-207ENST00000489402 SAFB2Q14151 953 aaKnown RBP eCLIP13.83□□□□□ -0.2
SNX17-207ENST00000489402 KRT28Q7Z3Y7 464 aa13.83□□□□□ -0.2
SNX17-207ENST00000489402 GJD4Q96KN9 370 aaPredicted RBP13.83□□□□□ -0.2
SNX17-207ENST00000489402 TNS3Q68CZ2 1445 aa13.82□□□□□ -0.2
SNX17-207ENST00000489402 PHF8Q9UPP1 1060 aa13.82□□□□□ -0.2
SNX17-207ENST00000489402 DLC1Q96QB1 1528 aa13.81□□□□□ -0.2
SNX17-207ENST00000489402 UNC5CLQ8IV45 518 aa13.81□□□□□ -0.2
SNX17-207ENST00000489402 CABLES1Q8TDN4 633 aa13.81□□□□□ -0.2
SNX17-207ENST00000489402 PRAM1Q96QH2 718 aa13.81□□□□□ -0.2
SNX17-207ENST00000489402 POGKQ9P215 609 aa13.81□□□□□ -0.2
SNX17-207ENST00000489402 SLIT2O94813 1529 aa13.8□□□□□ -0.2
SNX17-207ENST00000489402 CCDC125Q86Z20 511 aa13.8□□□□□ -0.2
SNX17-207ENST00000489402 RAB3GAP2Q9H2M9 1393 aa13.8□□□□□ -0.2
SNX17-207ENST00000489402 RALGAPBQ86X10 1494 aa13.8□□□□□ -0.2
SNX17-207ENST00000489402 PIAS4Q8N2W9 510 aaPredicted RBP13.79□□□□□ -0.2
SNX17-207ENST00000489402 SBNO1A3KN83 1393 aa13.79□□□□□ -0.2
SNX17-207ENST00000489402 ARHGEF10O15013 1369 aa13.79□□□□□ -0.2
SNX17-207ENST00000489402 ANKARQ7Z5J8 1434 aa13.79□□□□□ -0.2
SNX17-207ENST00000489402 ADGRB2O60241 1585 aa13.79□□□□□ -0.2
SNX17-207ENST00000489402 GLI3P10071 1580 aa13.79□□□□□ -0.2
SNX17-207ENST00000489402 PLCH1Q4KWH8 1693 aa13.79□□□□□ -0.2
SNX17-207ENST00000489402 ABCA3Q99758 1704 aa13.78□□□□□ -0.2
SNX17-207ENST00000489402 LMOD2Q6P5Q4 547 aa13.78□□□□□ -0.2
SNX17-207ENST00000489402 NWD2Q9ULI1 1742 aa13.78□□□□□ -0.2
SNX17-207ENST00000489402 EIF3AQ14152 1382 aaKnown RBP13.77□□□□□ -0.21
SNX17-207ENST00000489402 ZRANB1Q9UGI0 708 aa13.77□□□□□ -0.21
SNX17-207ENST00000489402 ADGRB1O14514 1584 aa13.76□□□□□ -0.21
SNX17-207ENST00000489402 PMFBP1Q8TBY8 1022 aa13.76□□□□□ -0.21
SNX17-207ENST00000489402 HIRIP3Q9BW71 556 aaPredicted RBP13.76□□□□□ -0.21
SNX17-207ENST00000489402 KDM2AQ9Y2K7 1162 aa13.75□□□□□ -0.21
SNX17-207ENST00000489402 CCDC9Q9Y3X0 531 aaKnown RBP13.75□□□□□ -0.21
SNX17-207ENST00000489402 BRWD3Q6RI45 1802 aa13.75□□□□□ -0.21
SNX17-207ENST00000489402 PRR36Q9H6K5 1346 aa13.74□□□□□ -0.21
SNX17-207ENST00000489402 VPS72Q15906 364 aa13.74□□□□□ -0.21
SNX17-207ENST00000489402 TRAK1Q9UPV9 953 aa13.74□□□□□ -0.21
SNX17-207ENST00000489402 BLMP54132 1417 aaPredicted RBP13.73□□□□□ -0.21
SNX17-207ENST00000489402 TRPM3Q9HCF6 1732 aaPredicted RBP13.73□□□□□ -0.21
SNX17-207ENST00000489402 GPRASP1Q5JY77 1395 aa13.73□□□□□ -0.21
SNX17-207ENST00000489402 DCAF11Q8TEB1 546 aa13.73□□□□□ -0.21
SNX17-207ENST00000489402 TULP4Q9NRJ4 1543 aa13.73□□□□□ -0.21
SNX17-207ENST00000489402 MINK1Q8N4C8 1332 aaPredicted RBP13.72□□□□□ -0.21
SNX17-207ENST00000489402 SF3B2Q13435 895 aaKnown RBP13.72□□□□□ -0.21
SNX17-207ENST00000489402 SEPT12Q8IYM1 358 aa13.72□□□□□ -0.21
SNX17-207ENST00000489402 STAC3Q96MF2 364 aa13.72□□□□□ -0.21
SNX17-207ENST00000489402 FAM83GA6ND36 823 aa13.71□□□□□ -0.21
SNX17-207ENST00000489402 ALS2Q96Q42 1657 aa13.71□□□□□ -0.21
SNX17-207ENST00000489402 ITSN1Q15811 1721 aa13.7□□□□□ -0.22
SNX17-207ENST00000489402 A0A0G2JS52 829 aa13.7□□□□□ -0.22
SNX17-207ENST00000489402 MYT1Q01538 1121 aa13.7□□□□□ -0.22
SNX17-207ENST00000489402 COL14A1Q05707 1796 aaKnown RBP13.7□□□□□ -0.22
SNX17-207ENST00000489402 NRAPQ86VF7 1730 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms