RNA–Protein interactions for RNA: ENST00000489337.5

SMTN-218, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 3,560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-218ENST00000489337 KDM5DQ9BY66 1539 aa15.08■□□□□ 0
SMTN-218ENST00000489337 ZRANB1Q9UGI0 708 aa15.08■□□□□ 0
SMTN-218ENST00000489337 LTKP29376 864 aa15.07■□□□□ 0
SMTN-218ENST00000489337 XPCQ01831 940 aaPredicted RBP15.07■□□□□ 0
SMTN-218ENST00000489337 CDK19Q9BWU1 502 aa15.07■□□□□ 0
SMTN-218ENST00000489337 HSPA2P54652 639 aa15.07■□□□□ 0
SMTN-218ENST00000489337 L1TD1Q5T7N2 865 aaKnown RBP15.06■□□□□ 0
SMTN-218ENST00000489337 SLKQ9H2G2 1235 aaPredicted RBP15.06■□□□□ 0
SMTN-218ENST00000489337 DIP2BQ9P265 1576 aa15.05■□□□□ 0
SMTN-218ENST00000489337 INO80Q9ULG1 1556 aaPredicted RBP15.05■□□□□ 0
SMTN-218ENST00000489337 IQGAP3Q86VI3 1631 aa15.05■□□□□ 0
SMTN-218ENST00000489337 PER1O15534 1290 aaPredicted RBP15.05■□□□□ -0
SMTN-218ENST00000489337 EID1Q9Y6B2 187 aa15.05■□□□□ -0
SMTN-218ENST00000489337 FRMPD1Q5SYB0 1578 aa15.04■□□□□ -0
SMTN-218ENST00000489337 EIF3AQ14152 1382 aaKnown RBP15.04■□□□□ -0
SMTN-218ENST00000489337 UHRF1BP1Q6BDS2 1440 aa15.04■□□□□ -0
SMTN-218ENST00000489337 UNC13BO14795 1591 aa15.04■□□□□ -0
SMTN-218ENST00000489337 KDM5CP41229 1560 aa15.04■□□□□ -0
SMTN-218ENST00000489337 PPRC1Q5VV67 1664 aaKnown RBP15.04■□□□□ -0
SMTN-218ENST00000489337 PPP2R1AP30153 589 aa15.04■□□□□ -0
SMTN-218ENST00000489337 PNNQ9H307 717 aaKnown RBP15.04■□□□□ -0
SMTN-218ENST00000489337 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.03■□□□□ -0
SMTN-218ENST00000489337 PLEKHH1Q9ULM0 1364 aa15.03■□□□□ -0
SMTN-218ENST00000489337 APAF1O14727 1248 aa15.03■□□□□ -0
SMTN-218ENST00000489337 U2AF1L5P0DN76 240 aaPredicted RBP15.03■□□□□ -0
SMTN-218ENST00000489337 U2AF1Q01081 240 aaKnown RBP eCLIP15.03■□□□□ -0
SMTN-218ENST00000489337 ZMYND15Q9H091 742 aa15.03■□□□□ -0
SMTN-218ENST00000489337 EVC2Q86UK5 1308 aa15.03■□□□□ -0
SMTN-218ENST00000489337 MTHFSP49914 203 aa15.02■□□□□ -0
SMTN-218ENST00000489337 DIP2CQ9Y2E4 1556 aa15.02■□□□□ -0
SMTN-218ENST00000489337 ABCC3O15438 1527 aa15.02□□□□□ -0.01
SMTN-218ENST00000489337 HSP90AA2PQ14568 343 aaPredicted RBP15.02□□□□□ -0.01
SMTN-218ENST00000489337 DNAJC5Q9H3Z4 198 aa15.01□□□□□ -0.01
SMTN-218ENST00000489337 BECN1Q14457 450 aa15.01□□□□□ -0.01
SMTN-218ENST00000489337 LTV1Q96GA3 475 aaPredicted RBP15□□□□□ -0.01
SMTN-218ENST00000489337 SCAF11Q99590 1463 aaKnown RBP15□□□□□ -0.01
SMTN-218ENST00000489337 HSP90AA1P07900 732 aaKnown RBP15□□□□□ -0.01
SMTN-218ENST00000489337 PTPRTO14522 1441 aa14.99□□□□□ -0.01
SMTN-218ENST00000489337 RRS1Q15050 365 aaKnown RBP14.99□□□□□ -0.01
SMTN-218ENST00000489337 BCL2L13Q9BXK5 485 aa14.99□□□□□ -0.01
SMTN-218ENST00000489337 ARAP3Q8WWN8 1544 aa14.99□□□□□ -0.01
SMTN-218ENST00000489337 PARD3Q8TEW0 1356 aa14.99□□□□□ -0.01
SMTN-218ENST00000489337 HMOX1P09601 288 aa14.99□□□□□ -0.01
SMTN-218ENST00000489337 EFCAB6Q5THR3 1501 aa14.98□□□□□ -0.01
SMTN-218ENST00000489337 AMER1Q5JTC6 1135 aaPredicted RBP14.98□□□□□ -0.01
SMTN-218ENST00000489337 NSD3Q9BZ95 1437 aa14.98□□□□□ -0.01
SMTN-218ENST00000489337 TRPM2O94759 1503 aa14.97□□□□□ -0.01
SMTN-218ENST00000489337 TNRQ92752 1358 aa14.97□□□□□ -0.01
SMTN-218ENST00000489337 NGDNQ8NEJ9 315 aaKnown RBP14.97□□□□□ -0.01
SMTN-218ENST00000489337 SPHKAPQ2M3C7 1700 aa14.97□□□□□ -0.01
SMTN-218ENST00000489337 NME9Q86XW9 330 aa14.96□□□□□ -0.01
SMTN-218ENST00000489337 AMOTL2Q9Y2J4 779 aa14.96□□□□□ -0.01
SMTN-218ENST00000489337 MROH1Q8NDA8 1641 aa14.96□□□□□ -0.01
SMTN-218ENST00000489337 RNF17Q9BXT8 1623 aaKnown RBP14.96□□□□□ -0.01
SMTN-218ENST00000489337 GOLGA6L3A6NEY3 463 aa14.96□□□□□ -0.01
SMTN-218ENST00000489337 CANXP27824 592 aaKnown RBP14.96□□□□□ -0.01
SMTN-218ENST00000489337 METP08581 1390 aa14.95□□□□□ -0.02
SMTN-218ENST00000489337 RIMS2Q9UQ26 1411 aa14.95□□□□□ -0.02
SMTN-218ENST00000489337 TET3O43151 1660 aa14.95□□□□□ -0.02
SMTN-218ENST00000489337 HDGFL2Q7Z4V5 671 aaPredicted RBP14.95□□□□□ -0.02
SMTN-218ENST00000489337 GZF1Q9H116 711 aaPredicted RBP14.95□□□□□ -0.02
SMTN-218ENST00000489337 MAGI2Q86UL8 1455 aa14.94□□□□□ -0.02
SMTN-218ENST00000489337 XRCC6P12956 609 aaKnown RBP eCLIP14.94□□□□□ -0.02
SMTN-218ENST00000489337 RRP9O43818 475 aaKnown RBP14.94□□□□□ -0.02
SMTN-218ENST00000489337 HDGFP51858 240 aaKnown RBP14.93□□□□□ -0.02
SMTN-218ENST00000489337 ELL2O00472 640 aaPredicted RBP14.93□□□□□ -0.02
SMTN-218ENST00000489337 DUSP27Q5VZP5 1158 aa14.93□□□□□ -0.02
SMTN-218ENST00000489337 SEC24BO95487 1268 aa14.92□□□□□ -0.02
SMTN-218ENST00000489337 CLCN1P35523 988 aa14.92□□□□□ -0.02
SMTN-218ENST00000489337 NUDT16Q96DE0 195 aaKnown RBP14.92□□□□□ -0.02
SMTN-218ENST00000489337 PANK2Q9BZ23 570 aa14.92□□□□□ -0.02
SMTN-218ENST00000489337 TERF2IPQ9NYB0 399 aa14.92□□□□□ -0.02
SMTN-218ENST00000489337 RPGRIP1LQ68CZ1 1315 aa14.92□□□□□ -0.02
SMTN-218ENST00000489337 KCNA6P17658 529 aa14.91□□□□□ -0.02
SMTN-218ENST00000489337 BLMP54132 1417 aaPredicted RBP14.91□□□□□ -0.02
SMTN-218ENST00000489337 GOLGA2Q08379 1002 aa14.91□□□□□ -0.02
SMTN-218ENST00000489337 USP19O94966 1318 aa14.91□□□□□ -0.02
SMTN-218ENST00000489337 CGNL1Q0VF96 1302 aa14.91□□□□□ -0.02
SMTN-218ENST00000489337 EMILIN1Q9Y6C2 1016 aa14.91□□□□□ -0.02
SMTN-218ENST00000489337 TRPM1Q7Z4N2 1603 aa14.91□□□□□ -0.02
SMTN-218ENST00000489337 MAP3K4Q9Y6R4 1608 aa14.91□□□□□ -0.02
SMTN-218ENST00000489337 GPRASP1Q5JY77 1395 aa14.91□□□□□ -0.02
SMTN-218ENST00000489337 MROH2AA6NES4 1674 aa14.91□□□□□ -0.02
SMTN-218ENST00000489337 KIF1BO60333 1816 aa14.9□□□□□ -0.02
SMTN-218ENST00000489337 RICTORQ6R327 1708 aa14.9□□□□□ -0.02
SMTN-218ENST00000489337 THEMISQ8N1K5 641 aaPredicted RBP14.9□□□□□ -0.02
SMTN-218ENST00000489337 CFAP74Q9C0B2 1584 aa14.9□□□□□ -0.02
SMTN-218ENST00000489337 UPF2Q9HAU5 1272 aaKnown RBP14.9□□□□□ -0.02
SMTN-218ENST00000489337 CLTCQ00610 1675 aaKnown RBP14.9□□□□□ -0.02
SMTN-218ENST00000489337 SPRYD3Q8NCJ5 442 aa14.89□□□□□ -0.03
SMTN-218ENST00000489337 DDX17Q92841 729 aaKnown RBP14.89□□□□□ -0.03
SMTN-218ENST00000489337 ZMYM4Q5VZL5 1548 aa14.89□□□□□ -0.03
SMTN-218ENST00000489337 THUMPD2Q9BTF0 503 aaKnown RBP14.88□□□□□ -0.03
SMTN-218ENST00000489337 CLUAP1Q96AJ1 413 aa14.88□□□□□ -0.03
SMTN-218ENST00000489337 DMRT2Q9Y5R5 561 aa14.88□□□□□ -0.03
SMTN-218ENST00000489337 SIGLEC1Q9BZZ2 1709 aa14.88□□□□□ -0.03
SMTN-218ENST00000489337 ERVK-7P63135 1459 aa14.87□□□□□ -0.03
SMTN-218ENST00000489337 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.87□□□□□ -0.03
SMTN-218ENST00000489337 IGHDP01880 384 aa14.87□□□□□ -0.03
SMTN-218ENST00000489337 CFAP53Q96M91 514 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms