RNA–Protein interactions for RNA: ENST00000489240.1

C9orf16-203, Transcript of chromosome 9 open reading frame 16, humanhuman

TSL 3

Gene C9orf16, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-203ENST00000489240 CDCA8Q53HL2 280 aa25.37■■□□□ 1.65
C9orf16-203ENST00000489240 CCDC7Q96M83 1385 aa25.36■■□□□ 1.65
C9orf16-203ENST00000489240 DISP3Q9P2K9 1392 aa25.36■■□□□ 1.65
C9orf16-203ENST00000489240 C11orf95C9JLR9 678 aaPredicted RBP25.36■■□□□ 1.65
C9orf16-203ENST00000489240 ADGRB2O60241 1585 aa25.35■■□□□ 1.65
C9orf16-203ENST00000489240 EVC2Q86UK5 1308 aa25.35■■□□□ 1.65
C9orf16-203ENST00000489240 MINK1Q8N4C8 1332 aaPredicted RBP25.35■■□□□ 1.65
C9orf16-203ENST00000489240 KIF7Q2M1P5 1343 aa25.34■■□□□ 1.65
C9orf16-203ENST00000489240 WASHC2AQ641Q2 1341 aa25.34■■□□□ 1.65
C9orf16-203ENST00000489240 TULP4Q9NRJ4 1543 aa25.33■■□□□ 1.65
C9orf16-203ENST00000489240 NALCNQ8IZF0 1738 aa25.32■■□□□ 1.64
C9orf16-203ENST00000489240 PROSER2Q86WR7 435 aaPredicted RBP25.29■■□□□ 1.64
C9orf16-203ENST00000489240 PUS7Q96PZ0 661 aaKnown RBP25.29■■□□□ 1.64
C9orf16-203ENST00000489240 POLR3GLQ9BT43 218 aa25.28■■□□□ 1.64
C9orf16-203ENST00000489240 XIRP1Q702N8 1843 aaKnown RBP25.26■■□□□ 1.63
C9orf16-203ENST00000489240 MYOM1P52179 1685 aa25.26■■□□□ 1.63
C9orf16-203ENST00000489240 ZNF335Q9H4Z2 1342 aaPredicted RBP25.25■■□□□ 1.63
C9orf16-203ENST00000489240 NCOA3Q9Y6Q9 1424 aa25.25■■□□□ 1.63
C9orf16-203ENST00000489240 CDC42BPGQ6DT37 1551 aa25.24■■□□□ 1.63
C9orf16-203ENST00000489240 ADGRL3Q9HAR2 1447 aa25.24■■□□□ 1.63
C9orf16-203ENST00000489240 WASLO00401 505 aaPredicted RBP25.24■■□□□ 1.63
C9orf16-203ENST00000489240 CDK19Q9BWU1 502 aa25.24■■□□□ 1.63
C9orf16-203ENST00000489240 FMN2Q9NZ56 1722 aa25.23■■□□□ 1.63
C9orf16-203ENST00000489240 SRPK2P78362 688 aaKnown RBP25.23■■□□□ 1.63
C9orf16-203ENST00000489240 ITSN1Q15811 1721 aa25.2■■□□□ 1.63
C9orf16-203ENST00000489240 ATAD2Q6PL18 1390 aa25.2■■□□□ 1.63
C9orf16-203ENST00000489240 DDX10Q13206 875 aaKnown RBP25.2■■□□□ 1.62
C9orf16-203ENST00000489240 C14orf37Q86TY3 774 aa25.2■■□□□ 1.62
C9orf16-203ENST00000489240 CABP2Q9NPB3 220 aa25.2■■□□□ 1.62
C9orf16-203ENST00000489240 TMEM94Q12767 1356 aa25.19■■□□□ 1.62
C9orf16-203ENST00000489240 LRRC7Q96NW7 1537 aa25.19■■□□□ 1.62
C9orf16-203ENST00000489240 RGPD8O14715 1765 aaPredicted RBP25.18■■□□□ 1.62
C9orf16-203ENST00000489240 RBM33Q96EV2 1170 aaKnown RBP25.17■■□□□ 1.62
C9orf16-203ENST00000489240 TOPAZ1Q8N9V7 1692 aa25.17■■□□□ 1.62
C9orf16-203ENST00000489240 NINLQ9Y2I6 1382 aa25.16■■□□□ 1.62
C9orf16-203ENST00000489240 C19orf44Q9H6X5 657 aa25.15■■□□□ 1.62
C9orf16-203ENST00000489240 USP32Q8NFA0 1604 aa25.15■■□□□ 1.62
C9orf16-203ENST00000489240 DCCP43146 1447 aa25.13■■□□□ 1.61
C9orf16-203ENST00000489240 ANKARQ7Z5J8 1434 aa25.13■■□□□ 1.61
C9orf16-203ENST00000489240 LTBP4Q8N2S1 1624 aa25.13■■□□□ 1.61
C9orf16-203ENST00000489240 ATP7BP35670 1465 aa25.13■■□□□ 1.61
C9orf16-203ENST00000489240 NUDT16Q96DE0 195 aaKnown RBP25.12■■□□□ 1.61
C9orf16-203ENST00000489240 MSH6P52701 1360 aa25.11■■□□□ 1.61
C9orf16-203ENST00000489240 TMC1Q8TDI8 760 aa25.11■■□□□ 1.61
C9orf16-203ENST00000489240 DIEXFQ68CQ4 756 aaKnown RBP25.1■■□□□ 1.61
C9orf16-203ENST00000489240 CCDC61Q9Y6R9 512 aa25.09■■□□□ 1.61
C9orf16-203ENST00000489240 PPIP5K1Q6PFW1 1433 aa25.08■■□□□ 1.61
C9orf16-203ENST00000489240 PRR36Q9H6K5 1346 aa25.08■■□□□ 1.6
C9orf16-203ENST00000489240 AKAP12Q02952 1782 aa25.08■■□□□ 1.6
C9orf16-203ENST00000489240 ATF3P18847 181 aa25.07■■□□□ 1.6
C9orf16-203ENST00000489240 SLC12A5Q9H2X9 1139 aa25.07■■□□□ 1.6
C9orf16-203ENST00000489240 NUTM2FA1L443 756 aa25.06■■□□□ 1.6
C9orf16-203ENST00000489240 CADPS2Q86UW7 1296 aa25.05■■□□□ 1.6
C9orf16-203ENST00000489240 PANK3Q9H999 370 aa25.05■■□□□ 1.6
C9orf16-203ENST00000489240 TERF2IPQ9NYB0 399 aa25.04■■□□□ 1.6
C9orf16-203ENST00000489240 CABP1Q9NZU7 370 aa25.04■■□□□ 1.6
C9orf16-203ENST00000489240 ANKRD36BQ8N2N9 1353 aa25.04■■□□□ 1.6
C9orf16-203ENST00000489240 MON2Q7Z3U7 1717 aa25.02■■□□□ 1.6
C9orf16-203ENST00000489240 HDGFL2Q7Z4V5 671 aaPredicted RBP25.01■■□□□ 1.59
C9orf16-203ENST00000489240 KIF1AQ12756 1690 aa25.01■■□□□ 1.59
C9orf16-203ENST00000489240 PLEKHG3A1L390 1219 aa25■■□□□ 1.59
C9orf16-203ENST00000489240 CD163L1Q9NR16 1453 aa25■■□□□ 1.59
C9orf16-203ENST00000489240 MST1RQ04912 1400 aa24.99■■□□□ 1.59
C9orf16-203ENST00000489240 C1orf167Q5SNV9 1468 aa24.98■■□□□ 1.59
C9orf16-203ENST00000489240 A0A1W2PP64 1363 aa24.98■■□□□ 1.59
C9orf16-203ENST00000489240 CPSF1Q10570 1443 aaKnown RBP24.97■■□□□ 1.59
C9orf16-203ENST00000489240 KNSTRNQ9Y448 316 aa24.97■■□□□ 1.59
C9orf16-203ENST00000489240 PER1O15534 1290 aaPredicted RBP24.96■■□□□ 1.59
C9orf16-203ENST00000489240 ZNF692Q9BU19 519 aaPredicted RBP24.96■■□□□ 1.59
C9orf16-203ENST00000489240 KTN1Q86UP2 1357 aaKnown RBP24.94■■□□□ 1.58
C9orf16-203ENST00000489240 ACEP12821 1306 aa24.94■■□□□ 1.58
C9orf16-203ENST00000489240 KIF20BQ96Q89 1820 aa24.94■■□□□ 1.58
C9orf16-203ENST00000489240 ESCO1Q5FWF5 840 aa24.94■■□□□ 1.58
C9orf16-203ENST00000489240 PHF8Q9UPP1 1060 aa24.94■■□□□ 1.58
C9orf16-203ENST00000489240 NSD3Q9BZ95 1437 aa24.94■■□□□ 1.58
C9orf16-203ENST00000489240 POLR3AO14802 1390 aaPredicted RBP24.93■■□□□ 1.58
C9orf16-203ENST00000489240 PMFBP1Q8TBY8 1022 aa24.93■■□□□ 1.58
C9orf16-203ENST00000489240 CARD14Q9BXL6 1004 aa24.93■■□□□ 1.58
C9orf16-203ENST00000489240 NGDNQ8NEJ9 315 aaKnown RBP24.92■■□□□ 1.58
C9orf16-203ENST00000489240 NRKQ7Z2Y5 1582 aa24.92■■□□□ 1.58
C9orf16-203ENST00000489240 IQSEC2Q5JU85 1478 aa24.91■■□□□ 1.58
C9orf16-203ENST00000489240 ANKRD26Q9UPS8 1709 aa24.9■■□□□ 1.58
C9orf16-203ENST00000489240 EDC4Q6P2E9 1401 aaKnown RBP24.9■■□□□ 1.58
C9orf16-203ENST00000489240 ANP32CO43423 234 aa24.9■■□□□ 1.58
C9orf16-203ENST00000489240 ORAI2Q96SN7 254 aa24.89■■□□□ 1.58
C9orf16-203ENST00000489240 SLAIN2Q9P270 581 aa24.89■■□□□ 1.58
C9orf16-203ENST00000489240 USP6P35125 1406 aa24.88■■□□□ 1.57
C9orf16-203ENST00000489240 NPC1L1Q9UHC9 1359 aa24.88■■□□□ 1.57
C9orf16-203ENST00000489240 CGNL1Q0VF96 1302 aa24.87■■□□□ 1.57
C9orf16-203ENST00000489240 BRD4O60885 1362 aaPredicted RBP24.86■■□□□ 1.57
C9orf16-203ENST00000489240 AMER1Q5JTC6 1135 aaPredicted RBP24.85■■□□□ 1.57
C9orf16-203ENST00000489240 NSD2O96028 1365 aa24.84■■□□□ 1.57
C9orf16-203ENST00000489240 PSME1Q06323 249 aa24.82■■□□□ 1.56
C9orf16-203ENST00000489240 SSH2Q76I76 1423 aa24.81■■□□□ 1.56
C9orf16-203ENST00000489240 TTC21AQ8NDW8 1320 aa24.81■■□□□ 1.56
C9orf16-203ENST00000489240 TRPM3Q9HCF6 1732 aaPredicted RBP24.81■■□□□ 1.56
C9orf16-203ENST00000489240 FOXO3O43524 673 aa24.8■■□□□ 1.56
C9orf16-203ENST00000489240 CC2D1BQ5T0F9 858 aaKnown RBP24.8■■□□□ 1.56
C9orf16-203ENST00000489240 BRINP3Q76B58 766 aa24.8■■□□□ 1.56
C9orf16-203ENST00000489240 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms