RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 NBPF1Q3BBV0 1214 aa17.7■□□□□ 0.42
COL4A5-206ENST00000489230 ZNF772Q68DY9 489 aaPredicted RBP17.7■□□□□ 0.42
COL4A5-206ENST00000489230 TRAK1Q9UPV9 953 aa17.7■□□□□ 0.42
COL4A5-206ENST00000489230 TECPR2O15040 1411 aa17.7■□□□□ 0.42
COL4A5-206ENST00000489230 ROBO2Q9HCK4 1378 aa17.69■□□□□ 0.42
COL4A5-206ENST00000489230 NBPF8Q3BBV2 869 aa17.69■□□□□ 0.42
COL4A5-206ENST00000489230 WAPLQ7Z5K2 1190 aa17.68■□□□□ 0.42
COL4A5-206ENST00000489230 XRN1Q8IZH2 1706 aaKnown RBP17.67■□□□□ 0.42
COL4A5-206ENST00000489230 KIAA1210Q9ULL0 1709 aa17.67■□□□□ 0.42
COL4A5-206ENST00000489230 PRAM1Q96QH2 718 aa17.67■□□□□ 0.42
COL4A5-206ENST00000489230 LRP6O75581 1613 aa17.67■□□□□ 0.42
COL4A5-206ENST00000489230 ROCK2O75116 1388 aaKnown RBP17.66■□□□□ 0.42
COL4A5-206ENST00000489230 ADGRB1O14514 1584 aa17.66■□□□□ 0.42
COL4A5-206ENST00000489230 AHDC1Q5TGY3 1603 aaPredicted RBP17.65■□□□□ 0.42
COL4A5-206ENST00000489230 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.64■□□□□ 0.41
COL4A5-206ENST00000489230 CARD11Q9BXL7 1154 aa17.64■□□□□ 0.41
COL4A5-206ENST00000489230 DLC1Q96QB1 1528 aa17.63■□□□□ 0.41
COL4A5-206ENST00000489230 UPF1Q92900 1129 aaKnown RBP eCLIP17.63■□□□□ 0.41
COL4A5-206ENST00000489230 DCCP43146 1447 aa17.63■□□□□ 0.41
COL4A5-206ENST00000489230 ASXL1Q8IXJ9 1541 aa17.62■□□□□ 0.41
COL4A5-206ENST00000489230 SHPRHQ149N8 1683 aa17.62■□□□□ 0.41
COL4A5-206ENST00000489230 SLC24A1O60721 1099 aa17.62■□□□□ 0.41
COL4A5-206ENST00000489230 ADGRL3Q9HAR2 1447 aa17.62■□□□□ 0.41
COL4A5-206ENST00000489230 NUTM2BA6NNL0 878 aaPredicted RBP17.61■□□□□ 0.41
COL4A5-206ENST00000489230 NUTM2EB1AL46 878 aaPredicted RBP17.61■□□□□ 0.41
COL4A5-206ENST00000489230 RXRBP28702 533 aa17.61■□□□□ 0.41
COL4A5-206ENST00000489230 NUTM2AQ8IVF1 878 aaPredicted RBP17.61■□□□□ 0.41
COL4A5-206ENST00000489230 GPRASP1Q5JY77 1395 aa17.61■□□□□ 0.41
COL4A5-206ENST00000489230 BRINP3Q76B58 766 aa17.6■□□□□ 0.41
COL4A5-206ENST00000489230 EIF3AQ14152 1382 aaKnown RBP17.6■□□□□ 0.41
COL4A5-206ENST00000489230 KNDC1Q76NI1 1749 aa17.59■□□□□ 0.41
COL4A5-206ENST00000489230 SAFB2Q14151 953 aaKnown RBP eCLIP17.59■□□□□ 0.41
COL4A5-206ENST00000489230 PLEKHH1Q9ULM0 1364 aa17.58■□□□□ 0.4
COL4A5-206ENST00000489230 CENPJQ9HC77 1338 aaPredicted RBP17.58■□□□□ 0.4
COL4A5-206ENST00000489230 RALGAPBQ86X10 1494 aa17.57■□□□□ 0.4
COL4A5-206ENST00000489230 TRPM1Q7Z4N2 1603 aa17.57■□□□□ 0.4
COL4A5-206ENST00000489230 MINK1Q8N4C8 1332 aaPredicted RBP17.55■□□□□ 0.4
COL4A5-206ENST00000489230 WASLO00401 505 aaPredicted RBP17.55■□□□□ 0.4
COL4A5-206ENST00000489230 AFF2P51816 1311 aa17.54■□□□□ 0.4
COL4A5-206ENST00000489230 CDK12Q9NYV4 1490 aaPredicted RBP17.53■□□□□ 0.4
COL4A5-206ENST00000489230 HIRIP3Q9BW71 556 aaPredicted RBP17.53■□□□□ 0.4
COL4A5-206ENST00000489230 LRRC59Q96AG4 307 aaKnown RBP17.52■□□□□ 0.4
COL4A5-206ENST00000489230 MST1RQ04912 1400 aa17.51■□□□□ 0.39
COL4A5-206ENST00000489230 ESCO1Q5FWF5 840 aa17.51■□□□□ 0.39
COL4A5-206ENST00000489230 CDK19Q9BWU1 502 aa17.51■□□□□ 0.39
COL4A5-206ENST00000489230 EVC2Q86UK5 1308 aa17.5■□□□□ 0.39
COL4A5-206ENST00000489230 C8orf37Q96NL8 207 aa17.5■□□□□ 0.39
COL4A5-206ENST00000489230 C1orf167Q5SNV9 1468 aa17.49■□□□□ 0.39
COL4A5-206ENST00000489230 CDC42BPGQ6DT37 1551 aa17.49■□□□□ 0.39
COL4A5-206ENST00000489230 NHSL1Q5SYE7 1610 aa17.48■□□□□ 0.39
COL4A5-206ENST00000489230 ST20-MTHFSA0A0A6YYL1 179 aa17.48■□□□□ 0.39
COL4A5-206ENST00000489230 QTRT2Q9H974 415 aaKnown RBP17.48■□□□□ 0.39
COL4A5-206ENST00000489230 NALCNQ8IZF0 1738 aa17.47■□□□□ 0.39
COL4A5-206ENST00000489230 NUTM2FA1L443 756 aa17.47■□□□□ 0.39
COL4A5-206ENST00000489230 RBM6P78332 1123 aaKnown RBP17.47■□□□□ 0.39
COL4A5-206ENST00000489230 SRPK2P78362 688 aaKnown RBP17.47■□□□□ 0.39
COL4A5-206ENST00000489230 ORAI2Q96SN7 254 aa17.47■□□□□ 0.39
COL4A5-206ENST00000489230 ARHGEF28Q8N1W1 1705 aaKnown RBP17.47■□□□□ 0.39
COL4A5-206ENST00000489230 ANKARQ7Z5J8 1434 aa17.47■□□□□ 0.39
COL4A5-206ENST00000489230 SBNO2Q9Y2G9 1366 aa17.46■□□□□ 0.39
COL4A5-206ENST00000489230 ZEB1P37275 1124 aaPredicted RBP17.46■□□□□ 0.39
COL4A5-206ENST00000489230 EIF4G2P78344 907 aaKnown RBP eCLIP17.46■□□□□ 0.39
COL4A5-206ENST00000489230 DDX17Q92841 729 aaKnown RBP17.46■□□□□ 0.39
COL4A5-206ENST00000489230 NUDT16Q96DE0 195 aaKnown RBP17.46■□□□□ 0.39
COL4A5-206ENST00000489230 PUS7Q96PZ0 661 aaKnown RBP17.46■□□□□ 0.39
COL4A5-206ENST00000489230 CCDC61Q9Y6R9 512 aa17.46■□□□□ 0.39
COL4A5-206ENST00000489230 PNPLA6Q8IY17 1366 aa17.45■□□□□ 0.38
COL4A5-206ENST00000489230 RGS12O14924 1447 aa17.45■□□□□ 0.38
COL4A5-206ENST00000489230 USP47Q96K76 1375 aa17.44■□□□□ 0.38
COL4A5-206ENST00000489230 CDCA8Q53HL2 280 aa17.44■□□□□ 0.38
COL4A5-206ENST00000489230 PHF8Q9UPP1 1060 aa17.44■□□□□ 0.38
COL4A5-206ENST00000489230 ADGRB2O60241 1585 aa17.44■□□□□ 0.38
COL4A5-206ENST00000489230 PSME1Q06323 249 aa17.43■□□□□ 0.38
COL4A5-206ENST00000489230 NGLY1Q96IV0 654 aa17.43■□□□□ 0.38
COL4A5-206ENST00000489230 NPHP3Q7Z494 1330 aa17.43■□□□□ 0.38
COL4A5-206ENST00000489230 ADAMTS2O95450 1211 aa17.42■□□□□ 0.38
COL4A5-206ENST00000489230 TMF1P82094 1093 aa17.42■□□□□ 0.38
COL4A5-206ENST00000489230 FOXO3O43524 673 aa17.41■□□□□ 0.38
COL4A5-206ENST00000489230 CABP2Q9NPB3 220 aa17.41■□□□□ 0.38
COL4A5-206ENST00000489230 PLEKHG3A1L390 1219 aa17.4■□□□□ 0.38
COL4A5-206ENST00000489230 NGDNQ8NEJ9 315 aaKnown RBP17.4■□□□□ 0.38
COL4A5-206ENST00000489230 TESK2Q96S53 571 aa17.4■□□□□ 0.38
COL4A5-206ENST00000489230 FMN2Q9NZ56 1722 aa17.39■□□□□ 0.37
COL4A5-206ENST00000489230 TULP4Q9NRJ4 1543 aa17.39■□□□□ 0.37
COL4A5-206ENST00000489230 PMFBP1Q8TBY8 1022 aa17.38■□□□□ 0.37
COL4A5-206ENST00000489230 PRR36Q9H6K5 1346 aa17.38■□□□□ 0.37
COL4A5-206ENST00000489230 ATAD2Q6PL18 1390 aa17.38■□□□□ 0.37
COL4A5-206ENST00000489230 QRICH2Q9H0J4 1663 aa17.37■□□□□ 0.37
COL4A5-206ENST00000489230 KRT28Q7Z3Y7 464 aa17.37■□□□□ 0.37
COL4A5-206ENST00000489230 ZNF692Q9BU19 519 aaPredicted RBP17.37■□□□□ 0.37
COL4A5-206ENST00000489230 USP21Q9UK80 565 aa17.37■□□□□ 0.37
COL4A5-206ENST00000489230 SOS2Q07890 1332 aaPredicted RBP17.37■□□□□ 0.37
COL4A5-206ENST00000489230 HSPA5P11021 654 aaKnown RBP17.36■□□□□ 0.37
COL4A5-206ENST00000489230 CABP1Q9NZU7 370 aa17.36■□□□□ 0.37
COL4A5-206ENST00000489230 TRPC5Q9UL62 973 aaPredicted RBP17.36■□□□□ 0.37
COL4A5-206ENST00000489230 ACEP12821 1306 aa17.33■□□□□ 0.36
COL4A5-206ENST00000489230 TMC1Q8TDI8 760 aa17.32■□□□□ 0.36
COL4A5-206ENST00000489230 KIF1AQ12756 1690 aa17.32■□□□□ 0.36
COL4A5-206ENST00000489230 ATP7BP35670 1465 aa17.31■□□□□ 0.36
COL4A5-206ENST00000489230 PPIP5K1Q6PFW1 1433 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms